Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J05
         (564 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7J779 Cluster: Putative uncharacterized protein n375R;...    39   0.093
UniRef50_Q9TEH5 Cluster: Putative DNA-polymerase, B-type; n=1; M...    37   0.28 
UniRef50_UPI00004984C0 Cluster: hypothetical protein 215.t00017;...    36   0.49 
UniRef50_A0BEY7 Cluster: Chromosome undetermined scaffold_103, w...    34   2.0  
UniRef50_O96235 Cluster: Putative uncharacterized protein PFB071...    33   6.1  
UniRef50_A0DSU7 Cluster: Chromosome undetermined scaffold_62, wh...    33   6.1  
UniRef50_Q248F4 Cluster: MatE family protein; n=1; Tetrahymena t...    32   8.1  
UniRef50_O30417 Cluster: Glutamate/gamma-aminobutyrate antiporte...    32   8.1  

>UniRef50_A7J779 Cluster: Putative uncharacterized protein n375R;
           n=1; Chlorella virus FR483|Rep: Putative uncharacterized
           protein n375R - Chlorella virus FR483
          Length = 162

 Score = 38.7 bits (86), Expect = 0.093
 Identities = 19/69 (27%), Positives = 38/69 (55%)
 Frame = -2

Query: 413 RSIVYNVSHQFFFSFIIQTPQTIIINLIYYLSYFVIIIMIIYEKFVVTQLNCEQFLVSAD 234
           R I+ N+ +    +F+I     I +NL+ +L+  + +  +I+  F++  +  + FL+  D
Sbjct: 20  RQIMRNLKYSILLNFLIFLNFLIFLNLLIFLNLLIFLDFLIFLDFLIFLIFLD-FLIFLD 78

Query: 233 MRLFLSFLI 207
             +FL FLI
Sbjct: 79  FLIFLDFLI 87


>UniRef50_Q9TEH5 Cluster: Putative DNA-polymerase, B-type; n=1;
           Morchella conica|Rep: Putative DNA-polymerase, B-type -
           Morchella conica
          Length = 901

 Score = 37.1 bits (82), Expect = 0.28
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
 Frame = -2

Query: 473 TLYNNLRAN-INIV*FNGNNSRSIVYNVSHQFFFSFIIQTPQTIII-NLIYYLSYFVIII 300
           TL +++ A+ +NI        + + YNV + F   FII  P  I + NL  + +YF  I+
Sbjct: 274 TLVDDITASQVNIKLIISQTIKRLWYNVINSFK-RFIINLPGYIYVHNLTKFDAYF--IL 330

Query: 299 MIIYEKFVVTQLNCEQFLVSADMRL 225
            IIY+ FVV  L  ++ ++  DM L
Sbjct: 331 KIIYDNFVVKPLYKDRTILQLDMTL 355


>UniRef50_UPI00004984C0 Cluster: hypothetical protein 215.t00017;
           n=2; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 215.t00017 - Entamoeba histolytica HM-1:IMSS
          Length = 439

 Score = 36.3 bits (80), Expect = 0.49
 Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -2

Query: 431 FNGN-NSRSIVYNVSHQFFFSFIIQTPQTIIINLIYYLSYFVIIIMIIYEKFVVTQL 264
           FN N    SIVYN S  FFFS I+     II+  I  +  F IIIM+I+   +   L
Sbjct: 154 FNFNWTITSIVYNTSFSFFFSSIL-----IILPTIMLIVIFTIIIMLIFHSIISLNL 205


>UniRef50_A0BEY7 Cluster: Chromosome undetermined scaffold_103,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_103,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 486

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -2

Query: 395 VSHQFFFSFIIQTPQTIIINLIYYLSYFVI-IIMIIYEKFVVTQLNCEQFLVSADMRLFL 219
           +  Q+  + + Q  + ++ ++I   SYF++  I   Y+  + +Q NCEQ+  + D + FL
Sbjct: 173 IRSQYLLTLVEQKWENVLESIIENQSYFILTFISETYQFKLASQRNCEQYFYNQDYKQFL 232


>UniRef50_O96235 Cluster: Putative uncharacterized protein PFB0710c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFB0710c - Plasmodium falciparum
           (isolate 3D7)
          Length = 403

 Score = 32.7 bits (71), Expect = 6.1
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
 Frame = -2

Query: 467 YNNLRANINIV*FNGNNSRSIVYNVSHQFFFSFIIQTPQTIIINLIYYLSYFVIIIMIIY 288
           YNN    I      GNN+ +IV  +    FF+FI  +P       ++Y   F++IIM++Y
Sbjct: 267 YNNKNNLIYKKKKKGNNNLNIVQMI----FFNFI-NSPNFFFSFSVFYNILFLLIIMLMY 321

Query: 287 -EKFVVTQLNCEQFLVSADMRL 225
            +K  +T+   + F V+   +L
Sbjct: 322 IKKNNITRKRIQDFFVNMKNKL 343


>UniRef50_A0DSU7 Cluster: Chromosome undetermined scaffold_62, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_62,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 121

 Score = 32.7 bits (71), Expect = 6.1
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
 Frame = -2

Query: 431 FNGNNSRSIVYN----VSHQFFFSFIIQTPQTIIINLIYYLSYFVIIIMIIYEK 282
           F+  + RS+VY     V ++   +  ++    III  IY L YF+II++I+ +K
Sbjct: 63  FSNQSGRSMVYQRKYGVMYKLLQNLYLRNIIFIIIYKIYCLYYFIIIVLIVLQK 116


>UniRef50_Q248F4 Cluster: MatE family protein; n=1; Tetrahymena
           thermophila SB210|Rep: MatE family protein - Tetrahymena
           thermophila SB210
          Length = 546

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -2

Query: 407 IVYNVSHQFFFSFIIQTPQTIIINLIYYL-SYFVIIIMIIYEKFVVTQLNCEQFLVS 240
           I+Y  SHQF F+ I++    +  NL +YL  ++ I I ++Y   + T L  +   +S
Sbjct: 402 IIYVESHQFMFTGIMKGCSQLKQNLTFYLVGFYFIGIPLVYILGIFTSLRLQGIWIS 458


>UniRef50_O30417 Cluster: Glutamate/gamma-aminobutyrate antiporter;
           n=47; Bacteria|Rep: Glutamate/gamma-aminobutyrate
           antiporter - Lactococcus lactis subsp. cremoris (strain
           MG1363)
          Length = 503

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = -2

Query: 374 SFIIQTPQTIIINLIYYLSYFVIIIMIIYEK 282
           SF++    T++I L+ YL +F++  ++IY+K
Sbjct: 359 SFLVAISLTVVIYLVGYLLFFIVYFVLIYKK 389


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,982,168
Number of Sequences: 1657284
Number of extensions: 6828329
Number of successful extensions: 13319
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13298
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)