BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_J05 (564 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr 2||... 26 4.4 SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 25 7.7 SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|c... 25 7.7 >SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr 2|||Manual Length = 295 Score = 25.8 bits (54), Expect = 4.4 Identities = 24/88 (27%), Positives = 35/88 (39%) Frame = -1 Query: 378 FFIYNSNTTNDYY*PNILPLLFRXXXXXNI*EIRSHTIKL*TIPCFGRHEVIFVILNIKM 199 +FIY NDY PN L L + R+H I P + VI Sbjct: 170 YFIYGPWHANDYIKPNHLLFLIVGWAFAVLSNFRTHIILRDLRPAGSKKRVI----PTGY 225 Query: 198 HYNLINR*MLLNTGVDWLFWIYYLITKN 115 +NL++ + WLF + L+TK+ Sbjct: 226 GFNLVSFPNYFFESLGWLF--FALLTKS 251 >SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schizosaccharomyces pombe|chr 1|||Manual Length = 720 Score = 25.0 bits (52), Expect = 7.7 Identities = 12/42 (28%), Positives = 23/42 (54%) Frame = -2 Query: 338 NLIYYLSYFVIIIMIIYEKFVVTQLNCEQFLVSADMRLFLSF 213 N I ++ FVI IY + L +Q++++ D+R +S+ Sbjct: 33 NFIQFIEEFVIDNDFIYRTQLRDNLVVKQYMLNIDLRHLISY 74 >SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|chr 2|||Manual Length = 329 Score = 25.0 bits (52), Expect = 7.7 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -1 Query: 168 LNTGVDWLFWIYYLITKN 115 L +GV WL W Y I KN Sbjct: 30 LMSGVQWLAWGIYKINKN 47 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,877,678 Number of Sequences: 5004 Number of extensions: 32034 Number of successful extensions: 55 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 55 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 238029836 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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