Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_J05
         (564 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61951-1|AAB03157.2|  530|Caenorhabditis elegans Hypothetical pr...    31   0.76 
Z80223-2|CAB02320.1|  344|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U97000-8|AAC47999.1|  347|Caenorhabditis elegans Seven tm recept...    29   3.1  
AL110482-4|CAB60337.1|  371|Caenorhabditis elegans Hypothetical ...    27   7.0  
AF125952-3|AAD14699.1|  475|Caenorhabditis elegans Hypothetical ...    27   9.3  
AC006722-9|ABP57813.1|  475|Caenorhabditis elegans Hypothetical ...    27   9.3  

>U61951-1|AAB03157.2|  530|Caenorhabditis elegans Hypothetical
           protein C48A7.2 protein.
          Length = 530

 Score = 30.7 bits (66), Expect = 0.76
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = -2

Query: 482 PISTLYNNLRANINIV*FNGNNSRSIVYNVSHQFFFSFIIQTPQTIIINLIYYLS 318
           P+ST ++ + A I         SR IV+   ++ FFS+II    + I+++  YLS
Sbjct: 122 PVSTTHSIVGATIGFA-LVAQGSRVIVWEKIYRIFFSWIISPLLSGIVSVFIYLS 175


>Z80223-2|CAB02320.1|  344|Caenorhabditis elegans Hypothetical
           protein F26D10.8 protein.
          Length = 344

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = -2

Query: 467 YNNLRANINIV*FNGNNSRSIVYNVSHQFFFSFIIQTPQTIIINLIYYLSYFV 309
           Y  LRA ++IV        S V N+  QFF++ ++QT   +I+  I    YFV
Sbjct: 222 YLRLRAQLSIV-------SSAVNNLQLQFFYALVLQTAIPLILMHIPITIYFV 267


>U97000-8|AAC47999.1|  347|Caenorhabditis elegans Seven tm receptor
           protein 136 protein.
          Length = 347

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -2

Query: 395 VSHQFFFSFIIQTPQTIIINLIYYLSYFVIIIMIIYEKFVVTQLNCEQF 249
           V+H     F++ T   + INL Y L  F++ +  +   FV + L+C+ F
Sbjct: 68  VAHMKGSMFVVFT-HNLSINLSYSLGEFLVCLHCVLTGFVASLLSCQFF 115


>AL110482-4|CAB60337.1|  371|Caenorhabditis elegans Hypothetical
           protein Y39G8B.3 protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 386 QFFFSFIIQ-TPQTIIINLIYYLSYFVIIIMIIYEKF 279
           +F F FI+  TP  + + LI +   + + I  I+EKF
Sbjct: 201 EFLFMFIVAATPNVLAVTLILFARQYNLKITRIHEKF 237


>AF125952-3|AAD14699.1|  475|Caenorhabditis elegans Hypothetical
           protein C01B4.7 protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -2

Query: 374 SFIIQTPQTIIINLIYYLSYFVIIIMIIYEKFVVTQLNCEQF 249
           S I +TPQ  I N +++    V I+++      +TQ+N + F
Sbjct: 18  SDIFETPQRKISNFVFWNQTRVFILILSLTCMTLTQINSQIF 59


>AC006722-9|ABP57813.1|  475|Caenorhabditis elegans Hypothetical
           protein Y19D10A.4 protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -2

Query: 374 SFIIQTPQTIIINLIYYLSYFVIIIMIIYEKFVVTQLNCEQF 249
           S I +TPQ  I N +++    V I+++      +TQ+N + F
Sbjct: 18  SDIFETPQRKISNFVFWNQTRVFILILSLTCMTLTQINSQIF 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,070,509
Number of Sequences: 27780
Number of extensions: 171652
Number of successful extensions: 333
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 333
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)