Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_J05
(564 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 26 0.23
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 25 0.40
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 25 0.40
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 24 1.2
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 24 1.2
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 24 1.2
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 24 1.2
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 24 1.2
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 2.8
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 3.7
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 21 6.5
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 26.2 bits (55), Expect = 0.23
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -2
Query: 470 LYNNLRANINIV*FNGNNSRSIVYNVSH 387
+ ++L N N +N NN + + YN++H
Sbjct: 81 IISSLSNNYNYSNYNNNNYKQLCYNINH 108
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 25.4 bits (53), Expect = 0.40
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -2
Query: 479 ISTLYNNLRANINIV*FNGNNSRSIVYNVSH 387
IS+L NN +NI+ N N ++ + YN+++
Sbjct: 82 ISSLSNNYISNISNYNNNNNYNKKLYYNINY 112
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.4 bits (53), Expect = 0.40
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -2
Query: 479 ISTLYNNLRANINIV*FNGNNSRSIVYNVSH 387
IS+L NN +NI+ N N ++ + YN+++
Sbjct: 320 ISSLSNNYISNISNYNNNNNYNKKLYYNINY 350
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -2
Query: 470 LYNNLRANINIV*FNGNNSRSIVYNVSH 387
+ ++L N N +N NN + + YN+++
Sbjct: 81 IISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -2
Query: 470 LYNNLRANINIV*FNGNNSRSIVYNVSH 387
+ ++L N N +N NN + + YN+++
Sbjct: 81 IISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -2
Query: 470 LYNNLRANINIV*FNGNNSRSIVYNVSH 387
+ ++L N N +N NN + + YN+++
Sbjct: 81 IISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -2
Query: 470 LYNNLRANINIV*FNGNNSRSIVYNVSH 387
+ ++L N N +N NN + + YN+++
Sbjct: 81 IISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -2
Query: 470 LYNNLRANINIV*FNGNNSRSIVYNVSH 387
+ ++L N N +N NN + + YN+++
Sbjct: 81 IISSLSNNYNYSNYNNNNYKQLCYNINY 108
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -2
Query: 479 ISTLYNNLRANINIV*FNGNNSRSIVYNVSH 387
IS+L N+ + N +N NN + + YN+++
Sbjct: 304 ISSLSNSCNYSNNY--YNNNNYKKLYYNINY 332
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -2
Query: 374 SFIIQTPQTIIINLIYYLSYFVIIIMIIYEKFV 276
S +I + I+L+Y + + I IYE F+
Sbjct: 394 SVLIGWSAFLCISLVYIIMLIIFIPRNIYENFI 426
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 202 FYIKNDKNNLMSAETRNCSQFNCV 273
FY ++ KNNL++A R +C+
Sbjct: 48 FYRQDTKNNLLNAYVRFKLVTDCI 71
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,188
Number of Sequences: 438
Number of extensions: 2434
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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