BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_J04 (536 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 30 0.25 SPBP8B7.14c |dpb2||DNA polymerase epsilon catalytic subunit b Dp... 27 1.8 SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 26 4.1 SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 26 4.1 SPBC947.09 |||ThiJ domain protein|Schizosaccharomyces pombe|chr ... 26 4.1 SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 25 7.2 SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 7.2 SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces p... 25 9.5 SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 25 9.5 >SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomerase|Schizosaccharomyces pombe|chr 2|||Manual Length = 361 Score = 29.9 bits (64), Expect = 0.25 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +1 Query: 307 SLKNGVATKILETGTDASATNDDTTEV-YFSAKDGIYVFDAKT 432 +LK GV ++TG+ ASATN E+ Y + VFD T Sbjct: 254 TLKGGVVVTDVKTGSGASATNGKKVEMRYIGKLENGKVFDKNT 296 >SPBP8B7.14c |dpb2||DNA polymerase epsilon catalytic subunit b Dpb2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 594 Score = 27.1 bits (57), Expect = 1.8 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -1 Query: 119 NSSDDTMSFSSLFSVTGAAFINPIKN 42 N S T SFS FS TG + PI+N Sbjct: 193 NESFQTPSFSGSFSQTGTYQLTPIRN 218 >SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor Ste6|Schizosaccharomyces pombe|chr 3|||Manual Length = 911 Score = 25.8 bits (54), Expect = 4.1 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -1 Query: 140 YWTNSFMNSSDDTMSFSSLFSVTGAAF 60 ++T F+N+ +S S LFS+ GA F Sbjct: 514 FFTTIFLNTYASMISSSDLFSILGAHF 540 >SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharomyces pombe|chr 2|||Manual Length = 733 Score = 25.8 bits (54), Expect = 4.1 Identities = 13/58 (22%), Positives = 25/58 (43%) Frame = -1 Query: 422 SKTYIPSLAEK*TXXXXXXXXXXXXXXSRILVATPFFNE*RPLYSFSPLSLTSASTKN 249 S T +PS++ + PF N +P+ + SP+++T++S N Sbjct: 645 SDTAVPSMSFANNISSRSVISAATDSKPSTRTSPPFVNNTKPIVAKSPVTVTASSETN 702 >SPBC947.09 |||ThiJ domain protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 261 Score = 25.8 bits (54), Expect = 4.1 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +1 Query: 286 KEYKGLYSLKNGVATKILETGTDASATNDDTTEVYFSAKDGIYVFD-AKTNKTEKYGTNT 462 K K + K+ + +I++ A N D +++F A +FD K +K GT+ Sbjct: 92 KAEKYVLENKDDMFWRIVQNSKTADEVNPDKYDIFFVAGGHATLFDFPKATNLQKLGTSI 151 Query: 463 DSLIGIV 483 G+V Sbjct: 152 YENGGVV 158 >SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces pombe|chr 1|||Manual Length = 581 Score = 25.0 bits (52), Expect = 7.2 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +1 Query: 418 FDAKTNKTEKYGTNTDSLIGIVXTNGSDVL 507 FD N +KY NTD + +V TNG ++ Sbjct: 460 FDIINN--QKYVVNTDGTLKVVITNGFPIV 487 >SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 3655 Score = 25.0 bits (52), Expect = 7.2 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = -1 Query: 482 TIPIKLSVFVPYFSVL 435 TIP++LS+ +PY S L Sbjct: 773 TIPVRLSLLLPYMSYL 788 >SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces pombe|chr 3|||Manual Length = 612 Score = 24.6 bits (51), Expect = 9.5 Identities = 13/21 (61%), Positives = 13/21 (61%) Frame = -1 Query: 149 LDEYWTNSFMNSSDDTMSFSS 87 L E WTNS N SDD FSS Sbjct: 472 LAESWTNSAKN-SDDPSKFSS 491 >SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccharomyces pombe|chr 1|||Manual Length = 430 Score = 24.6 bits (51), Expect = 9.5 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -1 Query: 167 RLTMSYLDEYWTNSFMNSSDDTMSFSSLFSVTGAAFINPIKNTTPK 30 R + SY DE + SSD + SS FS + + P + T PK Sbjct: 320 RRSRSYSDE--DEESVYSSDVSTESSSQFSSRSSEYSKPSRPTAPK 363 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.313 0.133 0.359 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,000,271 Number of Sequences: 5004 Number of extensions: 36678 Number of successful extensions: 87 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 87 length of database: 2,362,478 effective HSP length: 68 effective length of database: 2,022,206 effective search space used: 222442660 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.9 bits)
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