BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_J01 (466 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 42 6e-05 SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 36 0.004 SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 31 0.065 SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 31 0.065 SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 31 0.065 SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 30 0.20 SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr 1|||Ma... 28 0.81 SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2 |Schizosacc... 27 1.4 SPBC887.10 |mcs4||two-component response regulator |Schizosaccha... 27 1.9 SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 26 3.3 >SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Schizosaccharomyces pombe|chr 1|||Manual Length = 720 Score = 41.5 bits (93), Expect = 6e-05 Identities = 26/105 (24%), Positives = 45/105 (42%) Frame = +3 Query: 87 GRDPSRSINADEAATMGAVYRAAALATGYKVAALNVRDAVILPIQVVFTRHVDGNDQLVK 266 G+ S ++N DEA G A L+ ++V +V D PI + + ++ Sbjct: 361 GKGLSFTLNQDEAVARGCALSCAILSPVFRVREFHVHDVTTYPITFSWEPIPENPEEDSS 420 Query: 267 RTLFGPMNPYPQKKVITFNKHTDDFDFYVNYAELDHIPSTELQYI 401 +F NP P K++TF + F Y++ +P + Q I Sbjct: 421 LEVFSEGNPIPSTKILTFYRKA-PFKLLAAYSKEAQLPGSIKQNI 464 >SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 848 Score = 35.5 bits (78), Expect = 0.004 Identities = 15/39 (38%), Positives = 25/39 (64%) Frame = +3 Query: 99 SRSINADEAATMGAVYRAAALATGYKVAALNVRDAVILP 215 S+++NADEA+ GA + A+L ++V L V+D + P Sbjct: 394 SKNVNADEASVKGAAFYGASLTKSFRVKPLIVQDIINYP 432 >SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces pombe|chr 1|||Manual Length = 644 Score = 31.5 bits (68), Expect = 0.065 Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 2/86 (2%) Frame = +3 Query: 87 GRDPSRSINADEAATMGAVYRAAALA--TGYKVAALNVRDAVILPIQVVFTRHVDGNDQL 260 G++P +SIN DEA GA +AA L T K L + D L + + V L Sbjct: 354 GKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGV--MTPL 411 Query: 261 VKRTLFGPMNPYPQKKVITFNKHTDD 338 +KR P KK F+ + D+ Sbjct: 412 IKRN-----TTIPTKKSEVFSTYADN 432 >SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces pombe|chr 1|||Manual Length = 674 Score = 31.5 bits (68), Expect = 0.065 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +3 Query: 90 RDPSRSINADEAATMGAVYRAAALATGYKVAALNVRDAVILPIQV---VFTRHVDGNDQL 260 R+P++S+N DEA +GA + L+ K L + L I+ VFTR ++ N + Sbjct: 402 REPAKSVNPDEAVAIGAAIQGGVLSGHVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTI 461 Query: 261 VKR 269 R Sbjct: 462 PTR 464 >SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces pombe|chr 3|||Manual Length = 647 Score = 31.5 bits (68), Expect = 0.065 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 2/86 (2%) Frame = +3 Query: 87 GRDPSRSINADEAATMGAVYRAAALA--TGYKVAALNVRDAVILPIQVVFTRHVDGNDQL 260 G++P +SIN DEA GA +AA L T K L + D + P+ + L Sbjct: 354 GKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLD--VAPLSMGIETAGGVMTPL 411 Query: 261 VKRTLFGPMNPYPQKKVITFNKHTDD 338 +KR P KK F+ ++D+ Sbjct: 412 IKRN-----TTIPTKKSEIFSTYSDN 432 >SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces pombe|chr 2|||Manual Length = 613 Score = 29.9 bits (64), Expect = 0.20 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Frame = +3 Query: 87 GRDPSRSINADEAATMGAVYRAAAL---ATGYKVAALNVRDAVILPIQVVFTRHVDG 248 GR ++SIN DEA GA +AA L A K L + D V L + V +V G Sbjct: 358 GRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFG 414 >SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 387 Score = 27.9 bits (59), Expect = 0.81 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = -3 Query: 338 IVSVLIKSYYFLLW-VWIHWSEKCPLHQLI 252 I+S L+ S Y LW V+I W + P H+ I Sbjct: 292 ILSALLSSAYTFLWDVFIDWRIRFPFHKSI 321 >SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 758 Score = 27.1 bits (57), Expect = 1.4 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = +3 Query: 150 AAALATGYKVAALNVRDAVILP 215 AAA+ G KVAA NV+DA+I+P Sbjct: 370 AAAVVKGRKVAA-NVKDAMIVP 390 >SPBC887.10 |mcs4||two-component response regulator |Schizosaccharomyces pombe|chr 2|||Manual Length = 522 Score = 26.6 bits (56), Expect = 1.9 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -1 Query: 454 PNAVATPTNETLVRFKVP 401 PN + TP NET+ R K P Sbjct: 126 PNIIPTPANETVPRIKQP 143 >SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces pombe|chr 2|||Manual Length = 275 Score = 25.8 bits (54), Expect = 3.3 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -3 Query: 83 GGAQRADDGRSPSRAPRQHEPSAR 12 GG D GR SR+P HE +R Sbjct: 103 GGRVHGDSGRLRSRSPSPHEARSR 126 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,728,465 Number of Sequences: 5004 Number of extensions: 35138 Number of successful extensions: 91 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 91 length of database: 2,362,478 effective HSP length: 67 effective length of database: 2,027,210 effective search space used: 176367270 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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