BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_J01 (466 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 77 8e-15 Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 68 4e-12 Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 68 4e-12 X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 32 0.23 U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 32 0.23 AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 31 0.41 M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 30 0.71 Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 30 0.94 Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 30 0.94 Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 30 0.94 M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 29 1.2 U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 29 1.6 M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 29 1.6 Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 2.2 Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 2.9 Z81049-3|CAB02846.2| 631|Caenorhabditis elegans Hypothetical pr... 28 3.8 Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 27 5.0 Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 27 5.0 AY347577-1|AAP97871.1| 322|Caenorhabditis elegans COLlagen stru... 27 5.0 AC006665-1|AAF39908.1| 322|Caenorhabditis elegans Dumpy : short... 27 5.0 Z77663-6|CAB01207.1| 360|Caenorhabditis elegans Hypothetical pr... 27 6.6 Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 27 8.8 Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 27 8.8 Z81119-3|CAB03334.1| 550|Caenorhabditis elegans Hypothetical pr... 27 8.8 Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 27 8.8 Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 27 8.8 Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 27 8.8 U58746-7|AAB00628.2| 461|Caenorhabditis elegans Hypothetical pr... 27 8.8 >U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical protein T24H7.2 protein. Length = 925 Score = 76.6 bits (180), Expect = 8e-15 Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 11/132 (8%) Frame = +3 Query: 90 RDPSRSINADEAATMGAVYRAAALATGYKVAALNVRDAVILPIQVVF--------TRHVD 245 ++ + +N DEA MGA+++AA L+ G+KV N+ + VI P++V F T + Sbjct: 392 KEIGKFLNTDEAVAMGALFQAAHLSKGFKVKPFNIEEKVIFPVEVHFVSKIRDEKTEEIT 451 Query: 246 GNDQLVKRTLFGPMNPYP-QKKVITFNKHTDDFDFYVNYAELDHIPSTELQYIGTL--NL 416 G +VK TLF + YP K I+ ++DDF + Y +++ ++Q IG+L NL Sbjct: 452 GEKNVVK-TLFAANSVYPTHPKTISLTSYSDDFSVALKYGKIESFTKQQVQEIGSLLDNL 510 Query: 417 TKVSLVGVATAL 452 V + G++ AL Sbjct: 511 VDVEISGLSEAL 522 >Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical protein T14G8.3b protein. Length = 905 Score = 67.7 bits (158), Expect = 4e-12 Identities = 34/102 (33%), Positives = 62/102 (60%), Gaps = 1/102 (0%) Frame = +3 Query: 90 RDPSRSINADEAATMGAVYRAAALATGYKVAALNVRDAVILPIQVVF-TRHVDGNDQLVK 266 ++ S +N DEA MGAVY+AA L+ +KV NV + ++ P+ V F T+ +G + ++ Sbjct: 379 KEISNFLNTDEAIAMGAVYQAAHLSKSFKVLPFNVHEKILYPVFVNFLTKTEEGTMKPIR 438 Query: 267 RTLFGPMNPYPQKKVITFNKHTDDFDFYVNYAELDHIPSTEL 392 ++LFG P P +V+ F+ ++DDF + A+ + + + E+ Sbjct: 439 KSLFGENYPVP-NRVMHFSSYSDDFKIDIQDADKNPLSTVEI 479 >Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical protein T14G8.3a protein. Length = 921 Score = 67.7 bits (158), Expect = 4e-12 Identities = 34/102 (33%), Positives = 62/102 (60%), Gaps = 1/102 (0%) Frame = +3 Query: 90 RDPSRSINADEAATMGAVYRAAALATGYKVAALNVRDAVILPIQVVF-TRHVDGNDQLVK 266 ++ S +N DEA MGAVY+AA L+ +KV NV + ++ P+ V F T+ +G + ++ Sbjct: 395 KEISNFLNTDEAIAMGAVYQAAHLSKSFKVLPFNVHEKILYPVFVNFLTKTEEGTMKPIR 454 Query: 267 RTLFGPMNPYPQKKVITFNKHTDDFDFYVNYAELDHIPSTEL 392 ++LFG P P +V+ F+ ++DDF + A+ + + + E+ Sbjct: 455 KSLFGENYPVP-NRVMHFSSYSDDFKIDIQDADKNPLSTVEI 495 >X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. Length = 487 Score = 31.9 bits (69), Expect = 0.23 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +3 Query: 87 GRDPSRSINADEAATMGAVYRAAALA 164 G+ PS+++N DEA MGA + A LA Sbjct: 383 GKVPSKAVNPDEAVAMGAAIQGAVLA 408 >U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein protein 6 protein. Length = 657 Score = 31.9 bits (69), Expect = 0.23 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +3 Query: 87 GRDPSRSINADEAATMGAVYRAAALA 164 G+ PS+++N DEA MGA + A LA Sbjct: 383 GKVPSKAVNPDEAVAMGAAIQGAVLA 408 >AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock protein protein 4 protein. Length = 657 Score = 31.1 bits (67), Expect = 0.41 Identities = 24/83 (28%), Positives = 37/83 (44%) Frame = +3 Query: 87 GRDPSRSINADEAATMGAVYRAAALATGYKVAALNVRDAVILPIQVVFTRHVDGNDQLVK 266 G++PSR IN DEA GA +A + N D V+L + + T ++ ++ Sbjct: 383 GKEPSRGINPDEAVAYGAAVQAGVIG-----GVENTGDVVLLDVNPL-TLGIETVGGVMT 436 Query: 267 RTLFGPMNPYPQKKVITFNKHTD 335 + L G P KK F+ D Sbjct: 437 K-LIGRNTVIPTKKSQVFSTAAD 458 >M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.elegans heat shockprotein 4 gene, 3' end. ). Length = 288 Score = 30.3 bits (65), Expect = 0.71 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 87 GRDPSRSINADEAATMGAVYRAAAL 161 G++PSR IN DEA GA +A + Sbjct: 14 GKEPSRGINPDEAVAYGAAVQAGVI 38 >Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical protein C12C8.1 protein. Length = 643 Score = 29.9 bits (64), Expect = 0.94 Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 1/114 (0%) Frame = +3 Query: 87 GRDPSRSINADEAATMGAVYRAAALATGYKVAALNVRDAVILPIQVVFTRHVDGNDQLVK 266 G+D + SIN DEA GA +AA L +G K ++D +L + VV H V Sbjct: 357 GKDLNCSINPDEAVAFGAAVQAAVL-SGVKDD--TIKD--VLLVDVVPLSHGIETAGGVM 411 Query: 267 RTLFGPMNPYPQKKVITFNKHTDDF-DFYVNYAELDHIPSTELQYIGTLNLTKV 425 L P K TF + D+ + E + + + +GT LT + Sbjct: 412 TNLIDRNTRIPAKASKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELTGI 465 >Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical protein F26D10.3 protein. Length = 640 Score = 29.9 bits (64), Expect = 0.94 Identities = 18/45 (40%), Positives = 29/45 (64%) Frame = +3 Query: 84 TGRDPSRSINADEAATMGAVYRAAALATGYKVAALNVRDAVILPI 218 +G++ ++SIN DEA GA +AA L +G K A V+D ++L + Sbjct: 356 SGKELNKSINPDEAVAYGAAVQAAIL-SGDKSEA--VQDLLLLDV 397 >Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical protein T06E4.4 protein. Length = 290 Score = 29.9 bits (64), Expect = 0.94 Identities = 18/48 (37%), Positives = 20/48 (41%) Frame = -3 Query: 149 PVNSAHGGGLVGVDGPRRIAPGGGAQRADDGRSPSRAPRQHEPSARPG 6 P A G G G APG G QR+ PS AP P+ PG Sbjct: 171 PAGDAGAPGQAGAPGHPG-APGQGGQRSRGTPGPSGAPGPQGPAGGPG 217 >M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.elegans heat shockprotein 70A gene, complete cds. ). Length = 640 Score = 29.5 bits (63), Expect = 1.2 Identities = 18/45 (40%), Positives = 29/45 (64%) Frame = +3 Query: 84 TGRDPSRSINADEAATMGAVYRAAALATGYKVAALNVRDAVILPI 218 +G++ ++SIN DEA GA +AA L +G K A V+D ++L + Sbjct: 356 SGKELNKSINPDEALAYGAAVQAAIL-SGDKSEA--VQDLLLLDV 397 >U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein protein 3 protein. Length = 661 Score = 29.1 bits (62), Expect = 1.6 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +3 Query: 87 GRDPSRSINADEAATMGAVYRAAALA 164 G++PSR IN DEA GA + ++ Sbjct: 386 GKEPSRGINPDEAVAYGAAVQGGVIS 411 >M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. elegans BiP (hsp3)gene, complete cds. ). Length = 661 Score = 29.1 bits (62), Expect = 1.6 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +3 Query: 87 GRDPSRSINADEAATMGAVYRAAALA 164 G++PSR IN DEA GA + ++ Sbjct: 386 GKEPSRGINPDEAVAYGAAVQGGVIS 411 >Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical protein T06E4.6 protein. Length = 290 Score = 28.7 bits (61), Expect = 2.2 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = -3 Query: 149 PVNSAHGGGLVGVDGPRRIAPGGGAQRADDGRSPSRAPRQHEPSARPG 6 P A G G G APG G QR+ P+ AP P+ PG Sbjct: 171 PAGDAGAPGQAGAPGHPG-APGQGGQRSRGTPGPAGAPGPQGPAGGPG 217 >Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical protein F28D9.1 protein. Length = 601 Score = 28.3 bits (60), Expect = 2.9 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = -3 Query: 104 PRRIAPGGGAQRADDGRSPSRAPRQHEPSARPG 6 PRR +P G+ R D RSP R R+ P AR G Sbjct: 217 PRRGSPRRGSPRRDTRRSPPR--RRGSPPARGG 247 >Z81049-3|CAB02846.2| 631|Caenorhabditis elegans Hypothetical protein C48D1.1a protein. Length = 631 Score = 27.9 bits (59), Expect = 3.8 Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = +3 Query: 237 HVDGNDQLVKRTLFGPMNPYPQKKVITFNK-HTDDFDFYVNYAELDHIPSTELQYIGTLN 413 H++ + +L+KR N P +T + H ++ DFY + ++ S ++ LN Sbjct: 128 HIEKDQKLMKRWTAKIGNMLPSLTHLTMSDVHINEDDFYQLFGNFSNLRSLDISGTNILN 187 Query: 414 LTKVS 428 + +S Sbjct: 188 IAGIS 192 >Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical protein ZK863.2 protein. Length = 330 Score = 27.5 bits (58), Expect = 5.0 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = -3 Query: 170 PCSQSSSPVNSAHGGGLVGVDGPRRIAPGGG 78 PC S + GGG GV G A GGG Sbjct: 236 PCPPRSGAIAGGGGGGDAGVSGGSDSAVGGG 266 >Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical protein ZK863.2 protein. Length = 330 Score = 27.5 bits (58), Expect = 5.0 Identities = 13/31 (41%), Positives = 14/31 (45%) Frame = -3 Query: 170 PCSQSSSPVNSAHGGGLVGVDGPRRIAPGGG 78 PC S + GGG GV G A GGG Sbjct: 236 PCPPRSGAIAGGGGGGDAGVSGGSDSAVGGG 266 >AY347577-1|AAP97871.1| 322|Caenorhabditis elegans COLlagen structural gene, probablya critical component of the embryonically derived outerlayer of the L1 cuticle (31.8 kD) (col-59) protein. Length = 322 Score = 27.5 bits (58), Expect = 5.0 Identities = 15/48 (31%), Positives = 19/48 (39%) Frame = -3 Query: 149 PVNSAHGGGLVGVDGPRRIAPGGGAQRADDGRSPSRAPRQHEPSARPG 6 P G ++ V+GP PG G GR R P+ S PG Sbjct: 232 PGKKGDDGRVINVNGP----PGAGGAPGPQGRKGERGPKGVPGSVHPG 275 >AC006665-1|AAF39908.1| 322|Caenorhabditis elegans Dumpy : shorter than wild-typeprotein 14 protein. Length = 322 Score = 27.5 bits (58), Expect = 5.0 Identities = 15/48 (31%), Positives = 19/48 (39%) Frame = -3 Query: 149 PVNSAHGGGLVGVDGPRRIAPGGGAQRADDGRSPSRAPRQHEPSARPG 6 P G ++ V+GP PG G GR R P+ S PG Sbjct: 232 PGKKGDDGRVINVNGP----PGAGGAPGPQGRKGERGPKGVPGSVHPG 275 >Z77663-6|CAB01207.1| 360|Caenorhabditis elegans Hypothetical protein F53F4.7 protein. Length = 360 Score = 27.1 bits (57), Expect = 6.6 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -2 Query: 393 GVQSTVYGLVPRSLHRNRNRQCAY*KL 313 GVQ V G VPR + +++NR+ Y KL Sbjct: 306 GVQHMVDGTVPRIMTQSKNREQFYLKL 332 >Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical protein F44E5.5 protein. Length = 645 Score = 26.6 bits (56), Expect = 8.8 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 87 GRDPSRSINADEAATMGAVYRAAALA 164 G++ + SIN DEA GA +AA L+ Sbjct: 357 GKELNCSINPDEAVAFGAAVQAAVLS 382 >Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical protein F44E5.4 protein. Length = 645 Score = 26.6 bits (56), Expect = 8.8 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 87 GRDPSRSINADEAATMGAVYRAAALA 164 G++ + SIN DEA GA +AA L+ Sbjct: 357 GKELNCSINPDEAVAFGAAVQAAVLS 382 >Z81119-3|CAB03334.1| 550|Caenorhabditis elegans Hypothetical protein T10H4.4 protein. Length = 550 Score = 26.6 bits (56), Expect = 8.8 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Frame = +3 Query: 285 MNPYPQKKVITFNKHTDDFD---FYVNYAELDHIPSTELQYIGTLNLTKVSLVGVATA 449 +NP+ +I D F F+VN+A + TE + + NLT+++ G T+ Sbjct: 466 LNPFANNFLIIERSTNDKFSRWKFFVNFAVRVELFYTENLTLDSGNLTEITATGAGTS 523 >Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical protein C15A11.6 protein. Length = 316 Score = 26.6 bits (56), Expect = 8.8 Identities = 17/48 (35%), Positives = 18/48 (37%) Frame = -3 Query: 149 PVNSAHGGGLVGVDGPRRIAPGGGAQRADDGRSPSRAPRQHEPSARPG 6 P SA G G G +PG QR PS AP P PG Sbjct: 176 PAGSAGSPGQAGAPGNPG-SPGKSGQRGRGLPGPSGAPGSQGPPGAPG 222 >Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical protein W03G11.1b protein. Length = 279 Score = 26.6 bits (56), Expect = 8.8 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Frame = -3 Query: 125 GLVGVDGPR-RIAPGGGAQRADDGRSPSRAPRQHEPSARPGA 3 G G DGP ++ P GG+ A AP P PGA Sbjct: 180 GNPGADGPAGQLGPQGGSNVAPSPAGEPGAPGAQGPKGPPGA 221 >Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical protein W03G11.1a protein. Length = 332 Score = 26.6 bits (56), Expect = 8.8 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Frame = -3 Query: 125 GLVGVDGPR-RIAPGGGAQRADDGRSPSRAPRQHEPSARPGA 3 G G DGP ++ P GG+ A AP P PGA Sbjct: 233 GNPGADGPAGQLGPQGGSNVAPSPAGEPGAPGAQGPKGPPGA 274 >U58746-7|AAB00628.2| 461|Caenorhabditis elegans Hypothetical protein R05G6.10 protein. Length = 461 Score = 26.6 bits (56), Expect = 8.8 Identities = 10/38 (26%), Positives = 22/38 (57%) Frame = -2 Query: 306 SFVGMDSLVRKVSSSPIDRYHRHAA*KRLELARLPHHV 193 S VG+D +V+ ++S P+ RH+ K ++ + ++ Sbjct: 214 SMVGVDEIVQSLASDPLSEIGRHSKNKEGTISSISFYI 251 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,776,604 Number of Sequences: 27780 Number of extensions: 209810 Number of successful extensions: 710 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 674 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 709 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 829055604 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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