Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_I24
(373 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0691 - 22195142-22196197 31 0.38
12_02_0526 - 20032206-20033106,20034853-20035181 29 0.88
09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76... 28 2.0
08_02_0408 - 16829483-16829545,16830359-16830467,16830650-168308... 28 2.0
06_03_1244 - 28643570-28643946,28644041-28644200,28644345-28644752 28 2.0
08_02_0661 - 19780036-19781002,19781244-19781298,19782760-19783099 28 2.7
02_05_0975 + 33227431-33227730,33228556-33228636,33228883-332296... 28 2.7
06_03_1455 + 30264023-30264174,30265930-30266070,30266328-302664... 27 3.6
03_02_0089 + 5561622-5561855,5562748-5563247,5563411-5563501 27 3.6
03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785,688... 27 3.6
09_06_0245 - 21833622-21833901,21833988-21834059,21834152-218342... 27 4.7
07_01_0370 + 2749353-2749786,2749949-2750346,2750435-2750519,275... 27 4.7
04_04_1427 + 33491847-33491888,33493504-33493623,33493740-334939... 27 4.7
01_01_0381 - 2961422-2963917 27 4.7
08_02_0658 - 19755757-19756986 27 6.2
06_03_1243 + 28638140-28638508,28638959-28639118,28639213-28639589 27 6.2
04_04_1592 - 34649484-34649547,34650118-34650186,34650325-346504... 27 6.2
10_01_0263 - 2759479-2759534,2761002-2761299,2761382-2762134 26 8.2
07_01_0529 - 3922868-3923143,3924019-3924141 26 8.2
03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409... 26 8.2
02_05_0215 + 26833213-26833599 26 8.2
02_01_0443 + 3204142-3204674,3205446-3206178 26 8.2
>12_02_0691 - 22195142-22196197
Length = 351
Score = 30.7 bits (66), Expect = 0.38
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 90 ACVFMAFTLLRVLVLGVIAAATDDVSITWSSSSRAGSRV-CCLT 218
AC A L VL V A DDV++ W++++ A + + CLT
Sbjct: 81 ACAVAAPAALLAAVLAVPVLAADDVALAWAANASAAAALWWCLT 124
>12_02_0526 - 20032206-20033106,20034853-20035181
Length = 409
Score = 29.5 bits (63), Expect = 0.88
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 187 DDDDHVMETSSVAAAITPSTNTRSNVNAIKTQA 89
DDDDH +T S A T S+N N N+ K +
Sbjct: 304 DDDDHPNKTGSNTTAATLSSNITDNSNSNKNNS 336
>09_01_0042 +
764349-764763,764853-764902,765096-765172,766179-766236,
767481-767607,768665-768769,768842-769424,769470-769775,
770048-770139,770391-770440
Length = 620
Score = 28.3 bits (60), Expect = 2.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 100 LWRSHYCEYWCLVLSRRLP 156
+W YCEYW +V S +P
Sbjct: 182 VWGEMYCEYWTIVFSLGVP 200
>08_02_0408 -
16829483-16829545,16830359-16830467,16830650-16830874,
16832033-16832046
Length = 136
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 70 FRVFVQMLVFLWRSHYCEYWCLVLSRRL 153
F F+ +LVFL H+C W L S+RL
Sbjct: 11 FTYFLIILVFLTVPHFCVLWKLNASQRL 38
>06_03_1244 - 28643570-28643946,28644041-28644200,28644345-28644752
Length = 314
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 92 SICTNTRNITISGLRRDMQRSPL-PPAYCR 6
SIC N NI ++R MQ+SP+ PA R
Sbjct: 32 SICPNLENIVRGSVQRSMQQSPIAAPATLR 61
>08_02_0661 - 19780036-19781002,19781244-19781298,19782760-19783099
Length = 453
Score = 27.9 bits (59), Expect = 2.7
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +2
Query: 179 VVIEGGLPCVLPDAEKLVPRRPPPTLDAEDKIKSKAFVWRRDNEEIKRVPW---NGTLDG 349
VV EGG P + P PPP A + VW + E++R W NG ++
Sbjct: 357 VVQEGG-PQEVDGVMWFRPAAPPPNSGAAGGVGVDMVVWEKMKWELERGGWVDGNGDVES 415
Query: 350 VTR 358
+ R
Sbjct: 416 IER 418
>02_05_0975 +
33227431-33227730,33228556-33228636,33228883-33229680,
33230829-33231005,33231159-33231274,33231422-33231520,
33231598-33232040,33232147-33232184,33232343-33232600,
33233378-33233525,33233989-33234108,33234884-33234984,
33235090-33235213,33235386-33235498,33236103-33236214,
33236298-33236432,33236527-33236593,33236685-33236741,
33236774-33236900,33237221-33237338,33237418-33237929
Length = 1347
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 140 YRGGYRRCLHNMVVV-IEGGLPCVLPDA 220
Y YR+CL+ M+++ +EGGL V DA
Sbjct: 478 YEEAYRQCLYAMLLISVEGGLSNVQLDA 505
>06_03_1455 +
30264023-30264174,30265930-30266070,30266328-30266430,
30266510-30266659,30267184-30267229,30267383-30267738
Length = 315
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 113 CERHKNTSICTNTRNITISGLRRDMQRSPLPPAY 12
C ++ N S+ RNIT+ RR R+P P +Y
Sbjct: 164 CIKYLNQSVMEG-RNITVEKSRRGRPRTPTPGSY 196
>03_02_0089 + 5561622-5561855,5562748-5563247,5563411-5563501
Length = 274
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -3
Query: 218 RQAAHTGARPR*RRPCYGDIVGSRRDNT 135
RQ HTGA P RR Y D V S DN+
Sbjct: 61 RQHLHTGAPPSRRRASYTDRVLSYIDNS 88
>03_01_0006 +
65675-65808,66385-66457,68290-68526,68648-68785,
68871-69005,69131-69310,69495-69701,69821-69943,
70240-70359,70758-70880,72067-72171,72254-72398,
73443-73607,73669-73907,74452-74484,74977-75058,
75200-75360,75739-75951,76789-76971,77051-77220,
77375-77474
Length = 1021
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 83 CKCLCFYGVHITASIGAWCYRGGYRRCLHNMVVVIEGGLPCVLP 214
C C G+ I + + YR+ + N++V++ GG+P +P
Sbjct: 308 CICSIAAGMVIELLVMYAVHERKYRQIVDNLLVLLIGGIPIAMP 351
>09_06_0245 -
21833622-21833901,21833988-21834059,21834152-21834231,
21834366-21835109,21835212-21835547
Length = 503
Score = 27.1 bits (57), Expect = 4.7
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 236 RRPPPTLDAEDKIKSKAFV--WR-RDNEEI 316
R PPP A DK K KAFV W+ R +E+
Sbjct: 176 RDPPPAAAASDKPKHKAFVPPWKSRGKKEL 205
>07_01_0370 +
2749353-2749786,2749949-2750346,2750435-2750519,
2751200-2751314,2751538-2751591
Length = 361
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 176 VVVIEGGLPCVLPDAEKLVPRRPP 247
VV GG+PC+LP A P PP
Sbjct: 54 VVAAGGGVPCLLPRAAFPSPTLPP 77
>04_04_1427 +
33491847-33491888,33493504-33493623,33493740-33493976,
33494754-33495638,33495733-33495837,33495920-33496064,
33496146-33496310,33496391-33496629,33496724-33496756,
33496840-33496921,33497017-33497177,33497282-33497455,
33497549-33497731,33497832-33498019,33498155-33498251
Length = 951
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 83 CKCLCFYGVHITASIGAWCYRGGYRRCLHNMVVVIEGGLPCVLP 214
C C G+ I + YR + N++V++ GG+P +P
Sbjct: 247 CICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMP 290
>01_01_0381 - 2961422-2963917
Length = 831
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 107 VHITASIGAWCYRGGY--RRCLHNMVVVIEGGLPCVLPDAEKLVPR 238
V IG WC + R + +V ++EG L C +P +L+ R
Sbjct: 762 VERVCKIGCWCIQEDEVDRPTMGQVVQILEGVLDCDMPPLPRLLQR 807
>08_02_0658 - 19755757-19756986
Length = 409
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +2
Query: 185 IEGGLPCVLPDAEKLVPRRPPPTLDAEDKIKSKAFVWRRDNEEIKRVPW---NGTLDGVT 355
+ GG P ++ P PP + VW + E++R W NG ++ +
Sbjct: 300 VRGGGPQMVDGVMWFRPAAPPTNSGTAGGVGLDMVVWEKMKWELERGGWVAGNGDVESIE 359
Query: 356 RG 361
RG
Sbjct: 360 RG 361
>06_03_1243 + 28638140-28638508,28638959-28639118,28639213-28639589
Length = 301
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 89 ICTNTRNITISGLRRDMQRSPL-PPAYCR 6
IC N NI ++R MQ+SP+ PA R
Sbjct: 20 ICPNLENIVRGSVQRSMQQSPIAAPATLR 48
>04_04_1592 -
34649484-34649547,34650118-34650186,34650325-34650444,
34650630-34650742,34650824-34650898,34651224-34651346,
34651427-34651446,34652354-34652410,34652922-34653860,
34653961-34654189,34654296-34654439,34654527-34654601,
34655363-34655433,34656103-34656205,34656407-34656633,
34656791-34656908,34657239-34657369,34657709-34657802
Length = 923
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 181 DDHVMETSSVAAAITPSTNTRSNV 110
+D E+S VAAA+ P TN+R+ +
Sbjct: 491 NDSRKESSDVAAAVVPRTNSRTEM 514
>10_01_0263 - 2759479-2759534,2761002-2761299,2761382-2762134
Length = 368
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +2
Query: 203 CVLPDAEKLVPRRPPPTL-DAED 268
C+LP ++ P PPP+L AED
Sbjct: 3 CMLPSPQRACPGAPPPSLPPAED 25
>07_01_0529 - 3922868-3923143,3924019-3924141
Length = 132
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 221 PRQAAHTGARPR*RRPCYGDIVGSRRDNTK 132
P + H G R R PC ++ G R+ N K
Sbjct: 99 PAEDLHLGRLGRRRSPCLREVAGDRQRNWK 128
>03_06_0642 +
35239658-35240083,35240167-35240238,35240305-35240919,
35241253-35241435,35241604-35241663,35241733-35241936,
35242497-35242745,35243609-35243707,35243760-35243858,
35244463-35244480,35244668-35244862,35244981-35245073,
35245265-35245531,35245884-35246102
Length = 932
Score = 26.2 bits (55), Expect = 8.2
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 149 GYRRCLHNMVVVIEGGLPCVLPDAEKLVPRRPPPTLDAEDKIKSKAFVWRRDNEE-IKRV 325
G+RR + +M+VV+ G LP + +VP+ P L WRRD E+ I
Sbjct: 626 GWRRDIDDMIVVMRGYLP-----KDFVVPKSPERILFCG---------WRRDMEDMIMAC 671
Query: 326 PWNGTLD 346
P+ LD
Sbjct: 672 PFENVLD 678
>02_05_0215 + 26833213-26833599
Length = 128
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 139 TPSTNTRSNVNAIKTQAFAQTLGIL 65
TPS NT+ NA+K A A LG++
Sbjct: 39 TPSYNTKCPKNALKFAACADVLGLV 63
>02_01_0443 + 3204142-3204674,3205446-3206178
Length = 421
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 308 HYLGAIRRLSI*SYLRHRGSAADDAVLASPRQAAHTGAR 192
HY+G + L I +++ G D A A+P +A R
Sbjct: 114 HYIGMVNMLDILAHIAEAGDDNDAAADAAPSEAVDLDRR 152
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,196,723
Number of Sequences: 37544
Number of extensions: 222383
Number of successful extensions: 849
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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