BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_I24 (373 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 27 3.7 SB_35358| Best HMM Match : 7tm_1 (HMM E-Value=0.016) 27 3.7 SB_8728| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.44) 27 4.9 SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9 >SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) Length = 812 Score = 27.5 bits (58), Expect = 3.7 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +3 Query: 27 RAALHVSTQPANRNIPSVCANAC 95 R ++HVS P N PS+C + C Sbjct: 734 RPSVHVSDLPYNSACPSICKDVC 756 >SB_35358| Best HMM Match : 7tm_1 (HMM E-Value=0.016) Length = 133 Score = 27.5 bits (58), Expect = 3.7 Identities = 10/20 (50%), Positives = 16/20 (80%) Frame = +1 Query: 55 PLIVIFRVFVQMLVFLWRSH 114 PL++IF +V+M++ L RSH Sbjct: 81 PLLIIFPAYVKMIITLKRSH 100 >SB_8728| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.44) Length = 273 Score = 27.1 bits (57), Expect = 4.9 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +3 Query: 33 ALHVSTQPANRNIPSVCANACVFMAFTLLRVLVLGVIAAATDDVSIT 173 +LHV P+ R + S +A T++ +GV+AA V+ T Sbjct: 62 SLHVRPAPSEREVESTDNLGVAVVAATVIVAATVGVVAATVGVVAAT 108 >SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2529 Score = 27.1 bits (57), Expect = 4.9 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = +2 Query: 290 VWRRDNEEIKRVPWNGTLDG--VTRGRTV 370 +WR N IKR W G+ G +RGR + Sbjct: 304 IWRLRNPTIKRYTWRGSAQGKRSSRGRYI 332 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,330,349 Number of Sequences: 59808 Number of extensions: 244991 Number of successful extensions: 717 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 658 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 717 length of database: 16,821,457 effective HSP length: 74 effective length of database: 12,395,665 effective search space used: 607387585 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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