Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_I24
(373 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative ... 29 0.75
At1g69870.1 68414.m08041 proton-dependent oligopeptide transport... 29 1.3
At5g57350.1 68418.m07165 ATPase 3, plasma membrane-type / proton... 28 2.3
At2g46980.2 68415.m05869 expressed protein 27 4.0
At2g46980.1 68415.m05868 expressed protein 27 4.0
At2g24520.1 68415.m02929 ATPase, plasma membrane-type, putative ... 27 4.0
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 27 4.0
At4g30190.1 68417.m04292 ATPase 2, plasma membrane-type, putativ... 27 5.3
At5g64550.1 68418.m08112 loricrin-related contains weak similari... 26 7.0
At1g80660.1 68414.m09465 ATPase 9, plasma membrane-type, putativ... 26 7.0
At1g50410.1 68414.m05650 SNF2 domain-containing protein / helica... 26 7.0
At5g35792.1 68418.m04296 hypothetical protein 26 9.2
At3g06630.1 68416.m00770 protein kinase family protein contains ... 26 9.2
>At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative /
proton pump, putative similar to P-type
H(+)-transporting ATPase from Nicotiana plumbaginifolia
[SP|Q08435, SP|Q08436], Lycopersicon esculentum
[GI:5901757, SP|P22180], Solanum tuberosum [GI:435003];
contains InterPro accession IPR001757: ATPase, E1-E2
type
Length = 961
Score = 29.5 bits (63), Expect = 0.75
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 77 CLCKCLCFYGVHITASIGAWCYRGGYRRCLHNMVVVIEGGLPCVLP 214
C+C + I G + GYR + N++V++ GG+P +P
Sbjct: 250 CICSIAVGMAIEIVVIYGL--QKRGYRVGIDNLLVLLIGGIPIAMP 293
>At1g69870.1 68414.m08041 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 620
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 98 FYGVHITASIGAWCYRGGYRRCLHNMVVVIEGGLPCVLPDAEK 226
+Y I +S+ + +R RCL VVIEG L P A+K
Sbjct: 304 YYDPAIKSSVLSKLHRSNQFRCLDKAAVVIEGDLTPEGPPADK 346
>At5g57350.1 68418.m07165 ATPase 3, plasma membrane-type / proton
pump 3 nearly identical to SP|P20431 ATPase 3, plasma
membrane-type (EC 3.6.3.6) (Proton pump 3) {Arabidopsis
thaliana}; contains InterPro accession IPR001757:
ATPase, E1-E2 type
Length = 949
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 83 CKCLCFYGVHITASIGAWCYRGGYRRCLHNMVVVIEGGLPCVLP 214
C C G+ I + R YR + N++V++ GG+P +P
Sbjct: 248 CICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMP 291
>At2g46980.2 68415.m05869 expressed protein
Length = 516
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 200 PCVLPDAEKLVPRRPPPTLD 259
PC P+A L PR PTLD
Sbjct: 462 PCCSPEASPLQPRNISPTLD 481
>At2g46980.1 68415.m05868 expressed protein
Length = 516
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 200 PCVLPDAEKLVPRRPPPTLD 259
PC P+A L PR PTLD
Sbjct: 462 PCCSPEASPLQPRNISPTLD 481
>At2g24520.1 68415.m02929 ATPase, plasma membrane-type, putative /
proton pump, putative strong similarity to P-type
H(+)-transporting ATPase from [Phaseolus vulgaris]
GI:758250, [Lycopersicon esculentum] GI:1621440,
SP|Q03194 {Nicotiana plumbaginifolia}, [Solanum
tuberosum] GI:435001; contains InterPro accession
IPR001757: ATPase, E1-E2 type
Length = 931
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 83 CKCLCFYGVHITASIGAWCYRGGYRRCLHNMVVVIEGGLPCVLP 214
C C G+ + + R YR + N++V++ GG+P +P
Sbjct: 229 CICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMP 272
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 27.1 bits (57), Expect = 4.0
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 24 QRAALHVSTQPANRNIPSVCANACVFMAFTLLRVLVLGVIAAATDDVSITWSSSSRAG 197
+RAAL + + RN P NA +A + +VLG + DD +T S SR G
Sbjct: 19 KRAALRIQRENRRRNDPDEDKNAETKLALKHCKDMVLG-SSKFGDDRPLTGCSLSRDG 75
>At4g30190.1 68417.m04292 ATPase 2, plasma membrane-type, putative /
proton pump 2, putative / proton-exporting ATPase,
putative strong similarity to SP|P19456 ATPase 2, plasma
membrane-type (EC 3.6.3.6) (Proton pump 2) {Arabidopsis
thaliana}; contains InterPro accession IPR001757:
ATPase, E1-E2 type; contains Pfam profile PF00690:
Cation transporter/ATPase, N-terminus
Length = 948
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 83 CKCLCFYGVHITASIGAWCYRGGYRRCLHNMVVVIEGGLPCVLP 214
C C G+ I + R YR + N++V++ GG+P +P
Sbjct: 247 CICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMP 290
>At5g64550.1 68418.m08112 loricrin-related contains weak similarity
to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
Length = 634
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -3
Query: 104 HKNTSICTNTRNITISGLRRDMQRSPLPPAY 12
H N +C++ N G R + P PP+Y
Sbjct: 44 HHNHKLCSDVSNCPDGGCRLVLGLGPTPPSY 74
>At1g80660.1 68414.m09465 ATPase 9, plasma membrane-type, putative /
proton pump 9, putative / proton-exporting ATPase,
putative strong similarity to SP|Q42556 ATPase 9, plasma
membrane-type (EC 3.6.3.6) (Proton pump 9) {Arabidopsis
thaliana}; contains InterPro accession IPR001757:
ATPase, E1-E2 type
Length = 954
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 83 CKCLCFYGVHITASIGAWCYRGGYRRCLHNMVVVIEGGLPCVLP 214
C C G+ I + + YR + N++V++ GG+P +P
Sbjct: 252 CICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMP 295
>At1g50410.1 68414.m05650 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 981
Score = 26.2 bits (55), Expect = 7.0
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -1
Query: 205 TREPALDDDDHVMETSSVAAAITPSTNTRSNVNAIKTQAFAQTLGILRL 59
+++P DDDD + + V T +T SN IKT F+Q G+L L
Sbjct: 795 SQQPNDDDDDDDDDVTIVEK--TSLKSTPSNGGPIKTIIFSQWTGMLDL 841
>At5g35792.1 68418.m04296 hypothetical protein
Length = 132
Score = 25.8 bits (54), Expect = 9.2
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 176 PCYGDIVGSRRDNTKHQYSQ*CERHK-NTSICTNTRNI 66
PC G IV +R+D K Y CE+ K N + C + R +
Sbjct: 38 PCGGSIVDTRKDE-KRYYQ--CEKFKDNRTDCMHIRKL 72
>At3g06630.1 68416.m00770 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain,
PF00989 PAS domain, and PF00785 PAC motif
Length = 671
Score = 25.8 bits (54), Expect = 9.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 205 TREPALDDDDHVMETSSVAAAITPSTNTRSNVNAIKTQAFAQTLGI 68
T P DD+ V+ S+ + I P N R ++ +K Q + LG+
Sbjct: 154 TCSPFYDDNGTVVGIISITSDIAPYLNPRLSLPRLKPQEPERKLGL 199
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,301,614
Number of Sequences: 28952
Number of extensions: 153827
Number of successful extensions: 482
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 497853200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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