BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_I22 (566 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_29525| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22 SB_43557| Best HMM Match : Pentapeptide (HMM E-Value=8.1e-11) 31 0.50 SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66 SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) 29 2.6 SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1 SB_7240| Best HMM Match : OMPdecase (HMM E-Value=0) 28 6.1 SB_1853| Best HMM Match : RVT_1 (HMM E-Value=5.99994e-41) 27 8.1 >SB_29525| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 511 Score = 32.7 bits (71), Expect = 0.22 Identities = 18/63 (28%), Positives = 28/63 (44%) Frame = +2 Query: 260 ALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 439 AL + ALR P ++Y + ++ FK LK YP H + + L+ + D Sbjct: 180 ALRYVLDALRKPYGSKMYMFGIAALDRFKTRLKDYPHYCQHLASIPHFKEFPQSLIEYID 239 Query: 440 YSQ 448 Y Q Sbjct: 240 YGQ 242 >SB_43557| Best HMM Match : Pentapeptide (HMM E-Value=8.1e-11) Length = 129 Score = 31.5 bits (68), Expect = 0.50 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 2/91 (2%) Frame = +3 Query: 300 SISYXTGLWVTLTHSSIT*SLILKRNFISSALKSMMLSLRN*SHS-LTIANLMPLTVYS* 476 ++++ T + +TLTHS++T + N S L L+ N +HS LT + L LT+ Sbjct: 1 TLTHPTLIHLTLTHSNLTHLTLTHSNLTHSTLTHSNLTHLNLTHSTLTYSTLTHLTLTYS 60 Query: 477 PKKRLRLVTHT-TSRFVNHDSTTSLSVLPST 566 L + T T + H + T L++ ST Sbjct: 61 TLTHLTITYSTITHSTLTHLTLTHLTLTYST 91 Score = 30.7 bits (66), Expect = 0.87 Identities = 25/97 (25%), Positives = 41/97 (42%) Frame = +3 Query: 222 HLNHSTSTPSCPVRLTFTKPHFETLHSISYXTGLWVTLTHSSIT*SLILKRNFISSALKS 401 +L HST T S L T T ++++ T + TLTH +IT S I L Sbjct: 26 NLTHSTLTHSNLTHLNLTHSTL-TYSTLTHLTLTYSTLTHLTITYSTITHSTLTHLTLTH 84 Query: 402 MMLSLRN*SHSLTIANLMPLTVYS*PKKRLRLVTHTT 512 + L+ +HS + + + + +TH+T Sbjct: 85 LTLTYSTLTHSTLTHSTLTHSTLTHSTLTHSTITHST 121 Score = 29.9 bits (64), Expect = 1.5 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = +3 Query: 186 LMKLSLAMCSVQHLN--HSTSTPSCPVRLTFTKPHFETLHSISYXTGLWVTLTHSSIT*S 359 L L+L ++ HL +ST T S LT T H +++Y T TLTHS++T S Sbjct: 52 LTHLTLTYSTLTHLTITYSTITHSTLTHLTLT--HL----TLTYSTLTHSTLTHSTLTHS 105 Query: 360 LILKRNFISSALKSMMLSLRN*SH 431 + S + L+ N +H Sbjct: 106 TLTHSTLTHSTITHSTLTHSNLTH 129 Score = 27.9 bits (59), Expect = 6.1 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%) Frame = +3 Query: 189 MKLSLAMCSVQHLNHSTSTPSCPVRLTFTKP---HFETLH-SISYXTGLWVTLTHSSIT* 356 + L+ + + L H T T S LT T H H ++++ T + TLTHS++T Sbjct: 40 LNLTHSTLTYSTLTHLTLTYSTLTHLTITYSTITHSTLTHLTLTHLTLTYSTLTHSTLTH 99 Query: 357 SLILKRNFISSALKSMMLSLRN*SHS 434 S + S L ++ +HS Sbjct: 100 STLTHSTLTHSTLTHSTITHSTLTHS 125 >SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1548 Score = 31.1 bits (67), Expect = 0.66 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = +3 Query: 201 LAMCSVQHLNHSTSTPSCPVRLTFTKPHFET 293 L+ CS+Q L +T T P+R++F++PH T Sbjct: 1421 LSTCSLQSLTDNT-TSERPIRISFSEPHLHT 1450 >SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) Length = 2269 Score = 29.1 bits (62), Expect = 2.6 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 7/51 (13%) Frame = +2 Query: 50 LQKGKFE-----SYGKKIDFHDEKAINFVGNYWQENADL--YEEEVTKDYQ 181 L+KGKF+ S K ID E+ F+G+ W ++ DL +++E K+ Q Sbjct: 1093 LEKGKFQVKQWCSNSKTIDKSCERYCTFLGHKWDKDRDLLTFKKEKIKETQ 1143 >SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 6119 Score = 27.9 bits (59), Expect = 6.1 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Frame = +3 Query: 369 KRNFISSALKSMMLSLRN*SHSLTIANLMPLT--VYS*PKKRLRLVTHTTSRFVNHDSTT 542 K F++ K +MLS+R+ +SLT+ +++P VY K ++ T T S V+ ++ Sbjct: 3076 KDEFLAMESKKLMLSVRDRKNSLTLYHVIPKDSGVYKCVLKN-KVGTATKSFTVDVEAKK 3134 Query: 543 SLSVLP 560 S ++P Sbjct: 3135 SKGIIP 3140 >SB_7240| Best HMM Match : OMPdecase (HMM E-Value=0) Length = 474 Score = 27.9 bits (59), Expect = 6.1 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +2 Query: 377 LHFVGVKINDVVVEKLVTFFDYSQFDATNSV 469 LH G K++D VVE + F + +QF AT+ V Sbjct: 181 LHAQG-KVDDAVVESVREFLEANQFKATSDV 210 >SB_1853| Best HMM Match : RVT_1 (HMM E-Value=5.99994e-41) Length = 1069 Score = 27.5 bits (58), Expect = 8.1 Identities = 13/47 (27%), Positives = 23/47 (48%) Frame = +2 Query: 65 FESYGKKIDFHDEKAINFVGNYWQENADLYEEEVTKDYQRSYEIVAR 205 FE Y ++ DEKA ++ Y ++ A + E +RSY + + Sbjct: 138 FEIYVSLNEWQDEKAGQYLAVYLKDEAKAFYHEQEDSVRRSYRALCK 184 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,378,142 Number of Sequences: 59808 Number of extensions: 346218 Number of successful extensions: 1052 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 928 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1042 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1337207630 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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