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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_I22
         (566 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_29525| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.22 
SB_43557| Best HMM Match : Pentapeptide (HMM E-Value=8.1e-11)          31   0.50 
SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.66 
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)         29   2.6  
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.1  
SB_7240| Best HMM Match : OMPdecase (HMM E-Value=0)                    28   6.1  
SB_1853| Best HMM Match : RVT_1 (HMM E-Value=5.99994e-41)              27   8.1  

>SB_29525| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 511

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +2

Query: 260 ALDFYQTALRDPAFYQLYXRIVGYINAFKHYLKPYPQEKLHFVGVKINDVVVEKLVTFFD 439
           AL +   ALR P   ++Y   +  ++ FK  LK YP    H   +       + L+ + D
Sbjct: 180 ALRYVLDALRKPYGSKMYMFGIAALDRFKTRLKDYPHYCQHLASIPHFKEFPQSLIEYID 239

Query: 440 YSQ 448
           Y Q
Sbjct: 240 YGQ 242


>SB_43557| Best HMM Match : Pentapeptide (HMM E-Value=8.1e-11)
          Length = 129

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
 Frame = +3

Query: 300 SISYXTGLWVTLTHSSIT*SLILKRNFISSALKSMMLSLRN*SHS-LTIANLMPLTVYS* 476
           ++++ T + +TLTHS++T   +   N   S L    L+  N +HS LT + L  LT+   
Sbjct: 1   TLTHPTLIHLTLTHSNLTHLTLTHSNLTHSTLTHSNLTHLNLTHSTLTYSTLTHLTLTYS 60

Query: 477 PKKRLRLVTHT-TSRFVNHDSTTSLSVLPST 566
               L +   T T   + H + T L++  ST
Sbjct: 61  TLTHLTITYSTITHSTLTHLTLTHLTLTYST 91



 Score = 30.7 bits (66), Expect = 0.87
 Identities = 25/97 (25%), Positives = 41/97 (42%)
 Frame = +3

Query: 222 HLNHSTSTPSCPVRLTFTKPHFETLHSISYXTGLWVTLTHSSIT*SLILKRNFISSALKS 401
           +L HST T S    L  T     T  ++++ T  + TLTH +IT S I         L  
Sbjct: 26  NLTHSTLTHSNLTHLNLTHSTL-TYSTLTHLTLTYSTLTHLTITYSTITHSTLTHLTLTH 84

Query: 402 MMLSLRN*SHSLTIANLMPLTVYS*PKKRLRLVTHTT 512
           + L+    +HS    + +  +  +        +TH+T
Sbjct: 85  LTLTYSTLTHSTLTHSTLTHSTLTHSTLTHSTITHST 121



 Score = 29.9 bits (64), Expect = 1.5
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = +3

Query: 186 LMKLSLAMCSVQHLN--HSTSTPSCPVRLTFTKPHFETLHSISYXTGLWVTLTHSSIT*S 359
           L  L+L   ++ HL   +ST T S    LT T  H     +++Y T    TLTHS++T S
Sbjct: 52  LTHLTLTYSTLTHLTITYSTITHSTLTHLTLT--HL----TLTYSTLTHSTLTHSTLTHS 105

Query: 360 LILKRNFISSALKSMMLSLRN*SH 431
            +       S +    L+  N +H
Sbjct: 106 TLTHSTLTHSTITHSTLTHSNLTH 129



 Score = 27.9 bits (59), Expect = 6.1
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
 Frame = +3

Query: 189 MKLSLAMCSVQHLNHSTSTPSCPVRLTFTKP---HFETLH-SISYXTGLWVTLTHSSIT* 356
           + L+ +  +   L H T T S    LT T     H    H ++++ T  + TLTHS++T 
Sbjct: 40  LNLTHSTLTYSTLTHLTLTYSTLTHLTITYSTITHSTLTHLTLTHLTLTYSTLTHSTLTH 99

Query: 357 SLILKRNFISSALKSMMLSLRN*SHS 434
           S +       S L    ++    +HS
Sbjct: 100 STLTHSTLTHSTLTHSTITHSTLTHS 125


>SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1548

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 201  LAMCSVQHLNHSTSTPSCPVRLTFTKPHFET 293
            L+ CS+Q L  +T T   P+R++F++PH  T
Sbjct: 1421 LSTCSLQSLTDNT-TSERPIRISFSEPHLHT 1450


>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
          Length = 2269

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
 Frame = +2

Query: 50   LQKGKFE-----SYGKKIDFHDEKAINFVGNYWQENADL--YEEEVTKDYQ 181
            L+KGKF+     S  K ID   E+   F+G+ W ++ DL  +++E  K+ Q
Sbjct: 1093 LEKGKFQVKQWCSNSKTIDKSCERYCTFLGHKWDKDRDLLTFKKEKIKETQ 1143


>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6119

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = +3

Query: 369  KRNFISSALKSMMLSLRN*SHSLTIANLMPLT--VYS*PKKRLRLVTHTTSRFVNHDSTT 542
            K  F++   K +MLS+R+  +SLT+ +++P    VY    K  ++ T T S  V+ ++  
Sbjct: 3076 KDEFLAMESKKLMLSVRDRKNSLTLYHVIPKDSGVYKCVLKN-KVGTATKSFTVDVEAKK 3134

Query: 543  SLSVLP 560
            S  ++P
Sbjct: 3135 SKGIIP 3140


>SB_7240| Best HMM Match : OMPdecase (HMM E-Value=0)
          Length = 474

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 377 LHFVGVKINDVVVEKLVTFFDYSQFDATNSV 469
           LH  G K++D VVE +  F + +QF AT+ V
Sbjct: 181 LHAQG-KVDDAVVESVREFLEANQFKATSDV 210


>SB_1853| Best HMM Match : RVT_1 (HMM E-Value=5.99994e-41)
          Length = 1069

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +2

Query: 65  FESYGKKIDFHDEKAINFVGNYWQENADLYEEEVTKDYQRSYEIVAR 205
           FE Y    ++ DEKA  ++  Y ++ A  +  E     +RSY  + +
Sbjct: 138 FEIYVSLNEWQDEKAGQYLAVYLKDEAKAFYHEQEDSVRRSYRALCK 184


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,378,142
Number of Sequences: 59808
Number of extensions: 346218
Number of successful extensions: 1052
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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