Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_I21
(565 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 42 5e-06
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 23 1.4
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 22 3.2
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 22 4.2
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 21 7.3
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 21 7.3
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 9.6
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 9.6
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 21 9.6
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 21 9.6
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 21 9.6
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 41.5 bits (93), Expect = 5e-06
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 315 GAIVTACPWGYKLTPEKRC-LDIDECERNVSDCGPQQRCENFYGGYSCQCPAGHRLVGQN 491
G+ CP G++ + C L++D+C+ N C C + +SC CP+G +G
Sbjct: 204 GSYSCKCPKGFQ---GQNCELNVDDCKPN--PCQNGGTCHDLVNSFSCSCPSG--TLGYI 256
Query: 492 GCDDIDDCMHGSPCSYNSECVNTV 563
++DDC G+ C N C++ V
Sbjct: 257 CEINVDDCRPGA-CHNNGTCLDKV 279
Score = 40.7 bits (91), Expect = 8e-06
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 375 DIDECERNVSDCGPQQRCENFYGGYSCQCPAGHRLVGQNGCDDIDDCMHGSPCSYNSECV 554
+I+EC+ + C C + G YSC+CP G + GQN ++DDC +PC C
Sbjct: 184 EINECDS--APCQNGGTCLDLIGSYSCKCPKGFQ--GQNCELNVDDC-KPNPCQNGGTCH 238
Query: 555 NTV 563
+ V
Sbjct: 239 DLV 241
Score = 40.7 bits (91), Expect = 8e-06
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Frame = +3
Query: 387 CERNVSDCGP-----QQRCENFYGGYSCQCPAGHRLVGQNGCDDIDDCMHGSPCSY--NS 545
CE NV DC P C + GG+ C+CP G VG DI++C+ +PCS
Sbjct: 257 CEINVDDCRPGACHNNGTCLDKVGGFECKCPPG--FVGPRCEGDINECL-SNPCSNAGTL 313
Query: 546 ECVNTV 563
+CV V
Sbjct: 314 DCVQLV 319
Score = 35.9 bits (79), Expect = 2e-04
Identities = 43/179 (24%), Positives = 64/179 (35%), Gaps = 12/179 (6%)
Frame = +3
Query: 39 VGKCVDINECTTNRATCSINEDCVNYDGGFRCVC-----GSRCRAENEKPTYEXXXXXXX 203
+G +IN C N C++ GGF C C G RC + +
Sbjct: 253 LGYICEINVDDCRPGACHNNGTCLDKVGGFECKCPPGFVGPRCEGDINECLSNPCSNAGT 312
Query: 204 XXXXXXXGNTNVITVGAQYGQRGPWSLRPTYTRLSDSGAIVTACPWGYKLT-PE----KR 368
+ + G+ + T +G + T G+K T PE K
Sbjct: 313 LDCVQLVNDYHCNCKLGFMGRHCESKVNFCATSPCQNGGVCTTIHAGHKCTCPEGFYGKN 372
Query: 369 C-LDIDECERNVSDCGPQQRCENFYGGYSCQCPAGHRLVGQN-GCDDIDDCMHGSPCSY 539
C +C+ N G R + GGY C CP+G G N D I++C +PC +
Sbjct: 373 CEFSGYDCDSNPCQNGGVCRISD-GGGYICDCPSGTN--GTNCEIDTINEC-DSNPCKH 427
Score = 34.7 bits (76), Expect = 6e-04
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +3
Query: 300 RLSDSGAIVTACPWGYKLTPEKRC-LD-IDECERNVSDCGPQQR-CENFYGGYSCQCPAG 470
R+SD G + CP G T C +D I+EC+ N C C++ G Y+C CP
Sbjct: 392 RISDGGGYICDCPSG---TNGTNCEIDTINECDSN--PCKHLDAICQDKLGDYACYCPPK 446
Query: 471 HRLVGQNGCDDID 509
H G+N C+ D
Sbjct: 447 H--TGKN-CEIYD 456
Score = 31.9 bits (69), Expect = 0.004
Identities = 40/178 (22%), Positives = 59/178 (33%), Gaps = 12/178 (6%)
Frame = +3
Query: 54 DINECTTNRATCSINEDCVNYDGGFRCVCGSRCRAENEKPTYEXXXXXXXXXXXXXXGNT 233
+INEC + A C C++ G + C C + +N + +
Sbjct: 184 EINECDS--APCQNGGTCLDLIGSYSCKCPKGFQGQNCELNVDDCKPNPCQNGGTCHDLV 241
Query: 234 NVITVGAQYGQRG-----------PWSLRPTYTRLSDSGAIVTACPWGYKLTPEKRCL-D 377
N + G G P + T L G CP G+ + P RC D
Sbjct: 242 NSFSCSCPSGTLGYICEINVDDCRPGACHNNGTCLDKVGGFECKCPPGF-VGP--RCEGD 298
Query: 378 IDECERNVSDCGPQQRCENFYGGYSCQCPAGHRLVGQNGCDDIDDCMHGSPCSYNSEC 551
I+EC N C Y C C G +G++ C+ + SPC C
Sbjct: 299 INECLSNPCSNAGTLDCVQLVNDYHCNCKLG--FMGRH-CESKVNFCATSPCQNGGVC 353
Score = 29.9 bits (64), Expect = 0.016
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 402 SDCGPQQRCENFYGGYSCQCPAGHRLVGQNGCDDIDDCMHGSPCSYNSECV 554
S C C++ Y+C CP G+ G++ C + D +PC + CV
Sbjct: 68 SPCLNGATCQDHTTHYTCHCPYGY--TGKD-CGEYVDWCSTNPCENQATCV 115
Score = 29.5 bits (63), Expect = 0.021
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 9 CELGYTFNDKVGKCVDINECTTNRATCSINEDCVNYDGGFRCVCG 143
C GYT D G+ VD C+TN C CV ++C+CG
Sbjct: 87 CPYGYTGKD-CGEYVDW--CSTN--PCENQATCVQNKNQYQCLCG 126
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 23.4 bits (48), Expect = 1.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 345 YKLTPEKRCLDIDECERNVSDCG 413
++LT E C D+ C++N + G
Sbjct: 43 FRLTTEGDCRDVVRCDKNSDNNG 65
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +3
Query: 51 VDINECTTNRATCSINEDCVNYDGGFRCVC 140
++ ++C+ N C N CV+ F C C
Sbjct: 105 INTDDCSPN--PCRNNGSCVDRIADFECNC 132
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 21.8 bits (44), Expect = 4.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 87 CSINEDCVNYDGGFRCVCGSRCRA 158
CSI C+ Y+GGF RC A
Sbjct: 434 CSIFYYCLAYNGGF-VPLEQRCNA 456
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.0 bits (42), Expect = 7.3
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2
Query: 507 RYHRIRFVPLVDVR 466
R+H IR++ +D+R
Sbjct: 384 RFHEIRYMSTIDLR 397
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 9 CELGYTFNDKVGKC 50
C G +NDK G C
Sbjct: 138 CPNGLVYNDKAGIC 151
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 20.6 bits (41), Expect = 9.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 225 GNTNVITVGAQYGQRGPWSLRPTYT 299
GNT + V + G ++LRP T
Sbjct: 942 GNTERVLVPGDQTEAGVFTLRPATT 966
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 20.6 bits (41), Expect = 9.6
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = +3
Query: 495 CDDIDDCMHGSPCSY 539
CD C+HG P +
Sbjct: 488 CDKYYRCVHGKPTEF 502
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 462 PAGHRLVGQNGC 497
P H LVG+ GC
Sbjct: 129 PHPHNLVGREGC 140
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 432 NFYGGYSCQCPAGHRLVG 485
N+ G+SCQ G VG
Sbjct: 226 NYQEGFSCQYYQGKNCVG 243
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 432 NFYGGYSCQCPAGHRLVG 485
N+ G+SCQ G VG
Sbjct: 246 NYQEGFSCQYYQGKNCVG 263
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,043
Number of Sequences: 336
Number of extensions: 3017
Number of successful extensions: 23
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -