Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_I21
         (565 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   3.7  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   8.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.6  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +3

Query: 273 PWSLRPTYTRLSDSGAIVTACPWGYKLTPEKRC 371
           P + +P   RL+++    +  P G+K   +K+C
Sbjct: 738 PPTAQPRMERLAEAVRTASQIPQGFKDLVQKKC 770


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 356 CEFVTPRTGSDDGS 315
           C+  TPRTG++  S
Sbjct: 7   CDLATPRTGTNCSS 20


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 102  DCVNYDGGFRCVCGSRCRAEN 164
            D + Y+GG   VCG    AE+
Sbjct: 1060 DMLVYEGGHFYVCGDCTMAED 1080


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,768
Number of Sequences: 438
Number of extensions: 3681
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)