Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_I20
         (491 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC25B8.01 |dap1|SPAC26H5.15|cytochrome P450 regulator Dap1|Sch...    63   2e-11
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar...    29   0.29 
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p...    27   2.0  
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|...    26   2.7  
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    26   2.7  
SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces...    26   3.5  
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|...    26   3.5  
SPBC19C7.12c |||alpha-1,2-mannosyltransferase|Schizosaccharomyce...    25   4.7  
SPBP35G2.02 |||DUF1000 family protein|Schizosaccharomyces pombe|...    25   6.2  
SPAC343.09 |ubx3|mug39|UBX domain protein Ubx3|Schizosaccharomyc...    25   8.2  

>SPAC25B8.01 |dap1|SPAC26H5.15|cytochrome P450 regulator
           Dap1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 166

 Score = 63.3 bits (147), Expect = 2e-11
 Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
 Frame = +2

Query: 191 KDLTVSELRKYDGTQSDGRVLLAVNGIIFDVTKGRRXXXXXXXXXXXXXRDSTRGLATGQ 370
           +D T +EL++Y+G+++   V LA+ G +++VT G +              D++RGLA   
Sbjct: 41  RDYTPAELKEYNGSKNS-LVFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNS 99

Query: 371 -----VAAADNEEYDPCNDLTPDEIASAKEWEEQFREEYDIVGRL 490
                +  +D EE D C+DL  +E  +  +W+  F ++Y  VGRL
Sbjct: 100 FDDEFIPDSDAEELDDCSDLNDEERQALNDWKAFFDQKYQAVGRL 144


>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
            |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1131

 Score = 29.5 bits (63), Expect = 0.29
 Identities = 28/97 (28%), Positives = 42/97 (43%)
 Frame = -3

Query: 486  RPTMSYSSLNCSSHSFAEAISSGVKSLHGSYSSLSAAATCPVAKPRVESLPAKAAYXXXX 307
            +PT  +S+ N  S S++   SS       SYSS +   T    KP + S  + A+     
Sbjct: 887  KPTFKFSTSNSGSTSYSIPSSSSRNEGTTSYSS-NITVTSSTLKPSLTSSVSTASSYIAS 945

Query: 306  X*NRRPFVTSKIIPFTASKTLPSLCVPSYFLNSETVR 196
              +     T     F++S TL S  + S   NS TV+
Sbjct: 946  SASSNTLSTEP-KTFSSSSTL-SESISSINTNSLTVK 980


>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 584

 Score = 26.6 bits (56), Expect = 2.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 447 HSFAEAISSGVKSLHGSYSSLSAAATCPVAKPRVESLP 334
           H++++A S  + +   S+SSL   +  P+ KP + S P
Sbjct: 510 HNYSQAQSPNLATPSPSFSSLPDVSLPPIVKPNLMSEP 547


>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1036

 Score = 26.2 bits (55), Expect = 2.7
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = -2

Query: 298 PTSLCNIKNNSVYS**NSPIALCA--IVFPQLRNGEILPQFW*RRWC 164
           P+++C I    +     S +  CA  IV   L NG I P  W R WC
Sbjct: 209 PSNICLIVTGCINE---SRLLSCASGIVKEILANGIITPPTWTRPWC 252


>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1036

 Score = 26.2 bits (55), Expect = 2.7
 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
 Frame = -3

Query: 489 RRPTMSYSSLNCSSHSFAEAISSGVKSLHGSYSSLSAAAT--CPVAKPRVESLPAKAAYX 316
           +R T SY+    S+ S +   SS   S   S SSL++++T     A P   SL + +A  
Sbjct: 57  KRATTSYNYNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATS 116

Query: 315 XXXX*NRRPFVTSKIIPFTASKTLPSLCVPSYFLNSETVRS 193
                +     +      T+S    S    S   +S T  S
Sbjct: 117 SSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSS 157


>SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 497

 Score = 25.8 bits (54), Expect = 3.5
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -3

Query: 417 VKSLHGSYSSLSAAATCPVAKPRVESLPAKAAYXXXXX*NRRPF-VTSKIIPFTASKTLP 241
           ++S H   ++ S++AT    KP V+S+  +A+Y      +  P    S++ PF     +P
Sbjct: 160 LQSNHNVPTNNSSSATSST-KPSVQSV-GQASYPFLSSVSNFPSNFNSELFPFYFHDVVP 217

Query: 240 SLC 232
           S+C
Sbjct: 218 SIC 220



 Score = 25.0 bits (52), Expect = 6.2
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 465 SLNCSSHSFAEAISSGVKSLHGSYSSLSAAATCPVAKP 352
           S+ C ++S     S     + G+YS L+ A  CP+  P
Sbjct: 243 SMPCIANSLMAFASIKKLDVFGAYSHLTRALRCPMPGP 280


>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1184

 Score = 25.8 bits (54), Expect = 3.5
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -3

Query: 489 RRPTMSYSSLNCSSHSFAEAISSGVKSLHGS-YSSLSAAATCPVAK-PRVESLPA 331
           +RPT SY++ + +S  +         S++GS Y S S  +T    K P   S+PA
Sbjct: 377 KRPTSSYTAKDATSKVYRSNTYKPKSSVNGSVYRSKSVKSTTSHNKVPERNSVPA 431


>SPBC19C7.12c |||alpha-1,2-mannosyltransferase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 390

 Score = 25.4 bits (53), Expect = 4.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 383 DNEEYDPCNDLTPDEIASAKEWEEQFREEY 472
           D E Y+ C+  T  EIA    WE +   +Y
Sbjct: 265 DGETYNGCHFWTNFEIAKVDFWESEVYSKY 294


>SPBP35G2.02 |||DUF1000 family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 207

 Score = 25.0 bits (52), Expect = 6.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 82  FSFTLSYSVPHLQNYKIKFRIGCCLAACTTFFTKTE 189
           F F L++   H+  + +K R+   L     FFTK++
Sbjct: 121 FEFPLTFEGSHIFEFPVKTRLYQNLQNLNIFFTKSD 156


>SPAC343.09 |ubx3|mug39|UBX domain protein Ubx3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 410

 Score = 24.6 bits (51), Expect = 8.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 197 DPSSVLVKKVVQAARQHPIRNL 132
           DP   LV+ +++ ARQH I  L
Sbjct: 137 DPKKQLVRDILEKARQHTISPL 158


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,807,862
Number of Sequences: 5004
Number of extensions: 31206
Number of successful extensions: 114
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 192109570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)