Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_I20
(491 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g24940.1 68415.m02982 cytochrome b5 domain-containing protein... 57 6e-09
At3g48890.1 68416.m05341 cytochrome b5 domain-containing protein... 49 1e-06
At5g52240.1 68418.m06484 cytochrome b5 domain-containing protein... 47 6e-06
At4g14965.1 68417.m02300 cytochrome b5 domain-containing protein... 46 1e-05
At4g11250.1 68417.m01821 MADS-box family protein contains Pfam p... 30 0.74
At4g18000.1 68417.m02678 hypothetical protein 29 1.3
At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identic... 29 2.2
At2g14120.2 68415.m01573 dynamin-like protein 2b (ADL2b) identic... 29 2.2
At2g14120.1 68415.m01572 dynamin-like protein 2b (ADL2b) identic... 29 2.2
At5g16300.2 68418.m01906 expressed protein 28 3.9
At5g16300.1 68418.m01905 expressed protein 28 3.9
At1g35350.1 68414.m04383 EXS family protein / ERD1/XPR1/SYG1 fam... 27 6.9
At5g65330.1 68418.m08218 MADS-box family protein contains Pfam p... 27 9.1
At1g78080.1 68414.m09099 AP2 domain-containing transcription fac... 27 9.1
At1g67430.1 68414.m07675 60S ribosomal protein L17 (RPL17B) simi... 27 9.1
At1g27400.1 68414.m03340 60S ribosomal protein L17 (RPL17A) simi... 27 9.1
>At2g24940.1 68415.m02982 cytochrome b5 domain-containing protein
similar to SP|P70580 Membrane associated progesterone
receptor component 1 {Rattus norvegicus}; contains Pfam
profile PF00173: Heme/Steroid binding domain
Length = 100
Score = 57.2 bits (132), Expect = 6e-09
Identities = 27/99 (27%), Positives = 50/99 (50%)
Frame = +2
Query: 194 DLTVSELRKYDGTQSDGRVLLAVNGIIFDVTKGRRXXXXXXXXXXXXXRDSTRGLATGQV 373
+ T +L +Y+GT + +A+ G +FDVT G+ +D++R L G++
Sbjct: 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRAL--GKM 59
Query: 374 AAADNEEYDPCNDLTPDEIASAKEWEEQFREEYDIVGRL 490
+ + + LT EI + +WE +F +Y +VGR+
Sbjct: 60 SKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRV 98
>At3g48890.1 68416.m05341 cytochrome b5 domain-containing protein
similar to SP|O00264 Membrane associated progesterone
receptor component (mPR) {Homo sapiens}; contains Pfam
profile PF00173: Heme/Steroid binding domain
Length = 233
Score = 49.2 bits (112), Expect = 1e-06
Identities = 27/99 (27%), Positives = 52/99 (52%)
Frame = +2
Query: 194 DLTVSELRKYDGTQSDGRVLLAVNGIIFDVTKGRRXXXXXXXXXXXXXRDSTRGLATGQV 373
++T EL+ YDG+ S +L+A+ G I+DV++ R +D++R LA ++
Sbjct: 70 EITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALA--KM 127
Query: 374 AAADNEEYDPCNDLTPDEIASAKEWEEQFREEYDIVGRL 490
+ D + + L E+ + ++WE +F +Y VG +
Sbjct: 128 SFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTI 166
>At5g52240.1 68418.m06484 cytochrome b5 domain-containing protein
similar to SP|P70580 Membrane associated progesterone
receptor component 1 {Rattus norvegicus}; contains Pfam
profile PF00173: Heme/Steroid binding domain
Length = 220
Score = 47.2 bits (107), Expect = 6e-06
Identities = 26/97 (26%), Positives = 51/97 (52%)
Frame = +2
Query: 194 DLTVSELRKYDGTQSDGRVLLAVNGIIFDVTKGRRXXXXXXXXXXXXXRDSTRGLATGQV 373
++T EL++YDG+ +L+A+ I+DVT+ R +D++R LA ++
Sbjct: 74 EITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRALA--KM 131
Query: 374 AAADNEEYDPCNDLTPDEIASAKEWEEQFREEYDIVG 484
+ + + + L P E+ + ++WE +F +Y VG
Sbjct: 132 SFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVG 168
>At4g14965.1 68417.m02300 cytochrome b5 domain-containing protein
similar to SP|O15173 Membrane associated progesterone
receptor component 2 (Steroid receptor protein DG6)
{Homo sapiens}; contains Pfam profile PF00173:
Heme/Steroid binding domain
Length = 245
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/97 (27%), Positives = 42/97 (43%)
Frame = +2
Query: 200 TVSELRKYDGTQSDGRVLLAVNGIIFDVTKGRRXXXXXXXXXXXXXRDSTRGLATGQVAA 379
+ EL Y+GT +LL + G +FDVTKG+ RD++R +G
Sbjct: 43 SAEELALYNGTDETLPILLGILGSVFDVTKGKFHYGSGGGYNHFAGRDASRAFVSGNFTG 102
Query: 380 ADNEEYDPCNDLTPDEIASAKEWEEQFREEYDIVGRL 490
+ D L+ E+ S +W + Y VG+L
Sbjct: 103 --DGLTDSLQGLSSSEVKSIVDWRGFYSRTYTPVGKL 137
>At4g11250.1 68417.m01821 MADS-box family protein contains Pfam
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain); MADS-box protein
AGL52
Length = 329
Score = 30.3 bits (65), Expect = 0.74
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 401 DHTLRYQLQPLVQSLNHE*SPCQRKLRTVLRVRKTDVPL*HQ 276
DH QL L+QSL S Q++LR V +K + L HQ
Sbjct: 109 DHYSPQQLSQLIQSLERTLSTLQKRLRIVESQKKQNTNLVHQ 150
>At4g18000.1 68417.m02678 hypothetical protein
Length = 46
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +2
Query: 380 ADNEEYDPCNDLTPDEIASAKEWEEQFREEYDI 478
++N++ + +TP+EI S K+W +F +EY++
Sbjct: 7 SENKKVFSRSPMTPNEINSYKKWIIEFDDEYEV 39
>At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identical
to dynamin like protein 2a (ADL2a) [Arabidopsis
thaliana] GI:19032337; supported by cDNA gi:19032336
Length = 808
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 389 EEYDPCNDLTPDEIASA 439
EE DPC DLT D+I +A
Sbjct: 410 EEVDPCEDLTDDDIRTA 426
>At2g14120.2 68415.m01573 dynamin-like protein 2b (ADL2b) identical
to dynamin like protein 2b (ADL2b) [Arabidopsis
thaliana] GI:19032339
Length = 780
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 389 EEYDPCNDLTPDEIASA 439
EE DPC DLT D+I +A
Sbjct: 395 EEVDPCEDLTADDIRTA 411
>At2g14120.1 68415.m01572 dynamin-like protein 2b (ADL2b) identical
to dynamin like protein 2b (ADL2b) [Arabidopsis
thaliana] GI:19032339
Length = 780
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 389 EEYDPCNDLTPDEIASA 439
EE DPC DLT D+I +A
Sbjct: 395 EEVDPCEDLTADDIRTA 411
>At5g16300.2 68418.m01906 expressed protein
Length = 1034
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 444 SFAEAISSGVKSLHGSYSSLSAAATCPVAK 355
S E+IS+ + S+HG+ SLS+++ K
Sbjct: 81 SLCESISANISSIHGNIRSLSSSSVAETPK 110
>At5g16300.1 68418.m01905 expressed protein
Length = 1068
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 444 SFAEAISSGVKSLHGSYSSLSAAATCPVAK 355
S E+IS+ + S+HG+ SLS+++ K
Sbjct: 81 SLCESISANISSIHGNIRSLSSSSVAETPK 110
>At1g35350.1 68414.m04383 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 747
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 18 KIWLK*KLAVPHFGMNYLALLI 83
K WL+ KL VPH + Y+A+++
Sbjct: 650 KSWLREKLLVPHKSVYYVAMVV 671
>At5g65330.1 68418.m08218 MADS-box family protein contains Pfam
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain); MADS-box protein
AGL78
Length = 341
Score = 26.6 bits (56), Expect = 9.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 401 DHTLRYQLQPLVQSLNHE*SPCQRKLRTVLRVRKTDVPL*HQ 276
DH QL L+QSL S Q +LR V + + L HQ
Sbjct: 104 DHYSPQQLSQLIQSLERTLSTLQERLRIVEAQKLQNTNLVHQ 145
>At1g78080.1 68414.m09099 AP2 domain-containing transcription factor
RAP2.4 identical to AP2 domain containing protein
GI:2281633 from [Arabidopsis thaliana]
Length = 334
Score = 26.6 bits (56), Expect = 9.1
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = -3
Query: 465 SLNCSSHSFAEAISSGVKSLHGSYSSLSAAATCPVAKPRVESLPAKAAYXXXXX*NRRPF 286
S S +A+ +KS+ S SS SAA+ P SLP Y +PF
Sbjct: 13 SFQDSGGELMDALVPFIKSVSDSPSSSSAASASAFLHPSAFSLPPLPGYYPDSTFLTQPF 72
>At1g67430.1 68414.m07675 60S ribosomal protein L17 (RPL17B) similar
to ribosomal protein GI:19101 from [Hordeum vulgare]
Length = 175
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 430 RFCKRMGRTIQRRIRHS 480
RFC+ +GRT Q + RHS
Sbjct: 62 RFCRGVGRTAQAKNRHS 78
>At1g27400.1 68414.m03340 60S ribosomal protein L17 (RPL17A) similar
to GB:P51413 from [Arabidopsis thaliana]; similar to
ESTs gb|L33542 and gb|AA660016
Length = 176
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 430 RFCKRMGRTIQRRIRHS 480
RFC+ +GRT Q + RHS
Sbjct: 62 RFCRGVGRTAQAKNRHS 78
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,235,514
Number of Sequences: 28952
Number of extensions: 161427
Number of successful extensions: 438
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 858708096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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