Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_I19
(468 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone] flavopr... 181 8e-45
UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 144 1e-33
UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I, NUHM... 143 1e-33
UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone... 139 3e-32
UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 137 1e-31
UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11; P... 137 1e-31
UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium ... 132 4e-30
UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase... 129 3e-29
UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E; ... 128 5e-29
UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, who... 126 2e-28
UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase, mitocho... 120 1e-26
UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1; N... 118 8e-26
UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kD... 117 1e-25
UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-... 117 1e-25
UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;... 116 3e-25
UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=... 115 6e-25
UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;... 109 3e-23
UniRef50_A5CES4 Cluster: NADH dehydrogenase I chain E; n=1; Orie... 109 3e-23
UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1; ... 101 6e-21
UniRef50_A7DLV4 Cluster: NADH-quinone oxidoreductase, E subunit;... 100 1e-20
UniRef50_Q83BQ9 Cluster: NADH dehydrogenase I, E subunit; n=3; C... 98 1e-19
UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4; Alphaprote... 98 1e-19
UniRef50_Q5FGV2 Cluster: NADH-quinone oxidoreductase chain E; n=... 97 2e-19
UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9; R... 96 4e-19
UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2; Bact... 93 4e-18
UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1... 92 6e-18
UniRef50_A6H1R0 Cluster: NADH dehydrogenase I, E subunit; n=2; B... 91 1e-17
UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1... 90 3e-17
UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9; Alphaprote... 88 1e-16
UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24... 85 6e-16
UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=... 83 4e-15
UniRef50_P56910 Cluster: NADH-quinone oxidoreductase subunit E 2... 79 6e-14
UniRef50_Q9PGJ1 Cluster: NADH-ubiquinone oxidoreductase, NQO2 su... 78 8e-14
UniRef50_Q0PQQ4 Cluster: NADH dehydrogenase I E subunit; n=1; En... 78 8e-14
UniRef50_Q82TU7 Cluster: Respiratory-chain NADH dehydrogenase 24... 77 1e-13
UniRef50_A1WXW3 Cluster: NADH-quinone oxidoreductase, E subunit;... 77 1e-13
UniRef50_Q6MIR6 Cluster: NADH dehydrogenase I chain E; n=1; Bdel... 76 3e-13
UniRef50_A5UZH6 Cluster: NADH-quinone oxidoreductase, E subunit;... 75 6e-13
UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;... 74 1e-12
UniRef50_A6FCN2 Cluster: NuoE2 NADH I CHAIN E; n=1; Moritella sp... 74 1e-12
UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1; Sy... 73 2e-12
UniRef50_A7CUG1 Cluster: NADH-quinone oxidoreductase, E subunit;... 72 7e-12
UniRef50_A4SXP9 Cluster: NADH-quinone oxidoreductase, E subunit;... 71 1e-11
UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;... 70 3e-11
UniRef50_Q092T1 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 69 4e-11
UniRef50_Q6MDR2 Cluster: Putative NADH-ubiquinone oxidoreductase... 68 9e-11
UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=... 67 2e-10
UniRef50_A3THI9 Cluster: ATP synthase subunit E; n=3; Actinomyce... 66 4e-10
UniRef50_A1AVR6 Cluster: NADH-quinone oxidoreductase, E subunit;... 66 5e-10
UniRef50_Q0EZQ5 Cluster: NADH dehydrogenase I chain E; n=1; Mari... 64 1e-09
UniRef50_P0AFD3 Cluster: NADH-quinone oxidoreductase subunit E; ... 64 1e-09
UniRef50_Q0AZ71 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 64 1e-09
UniRef50_A7HII1 Cluster: NADH-quinone oxidoreductase, E subunit;... 63 3e-09
UniRef50_Q6A6G2 Cluster: NADH dehydrogenase I chain E; n=1; Prop... 63 3e-09
UniRef50_A7HLQ9 Cluster: NADH-quinone oxidoreductase, E subunit;... 63 3e-09
UniRef50_Q746S5 Cluster: NADH dehydrogenase I, E subunit; n=4; D... 62 8e-09
UniRef50_Q2LYE8 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 62 8e-09
UniRef50_A3ERJ3 Cluster: NADH ubiquinone oxidoreductase 24 kD su... 62 8e-09
UniRef50_Q5JIQ1 Cluster: NADH:ubiquinone oxidoreductase, subunit... 62 8e-09
UniRef50_Q9WXM7 Cluster: NADP-reducing hydrogenase, subunit A; n... 61 1e-08
UniRef50_Q8ABI7 Cluster: NADH-ubiquinone oxidoreductase subunit;... 61 1e-08
UniRef50_Q3ZXM4 Cluster: Hydrogenase subunit HymA; n=13; cellula... 61 1e-08
UniRef50_A6PRE1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 61 1e-08
UniRef50_A4J528 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 61 1e-08
UniRef50_P65574 Cluster: NADH-quinone oxidoreductase subunit E; ... 60 2e-08
UniRef50_Q608Y0 Cluster: NADH dehydrogenase I, E subunit; n=5; B... 59 4e-08
UniRef50_A4J9N9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 59 4e-08
UniRef50_Q3A640 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 58 7e-08
UniRef50_Q1EVZ9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 58 1e-07
UniRef50_A0UV12 Cluster: NADH-quinone oxidoreductase, E subunit;... 58 1e-07
UniRef50_O27591 Cluster: NADP-reducing hydrogenase, subunit A; n... 58 1e-07
UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase... 58 1e-07
UniRef50_Q1PYY2 Cluster: Similar to nuoE subunit of the NADH:ubi... 57 2e-07
UniRef50_Q67JG1 Cluster: Putative iron hydrogenase small subunit... 57 2e-07
UniRef50_A5FSK9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 56 3e-07
UniRef50_Q9S5X7 Cluster: Fe-hydrogenase, subunit gamma; n=5; The... 56 4e-07
UniRef50_Q1NQY7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 56 4e-07
UniRef50_A5FS13 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 56 4e-07
UniRef50_Q7NZH7 Cluster: NADH-ubiquinone oxidoreductase, chain E... 56 5e-07
UniRef50_Q1PWG7 Cluster: Similar to to proton-translocating NADH... 56 5e-07
UniRef50_A1HP41 Cluster: NADH-quinone oxidoreductase, E subunit;... 56 5e-07
UniRef50_Q8YYU5 Cluster: NADH dehydrogenase I chain E; n=4; Bact... 55 9e-07
UniRef50_Q1PW48 Cluster: Similar to NADH:ubiquinone oxidoreducta... 54 1e-06
UniRef50_A5D2H5 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 54 1e-06
UniRef50_Q9RU91 Cluster: NADH dehydrogenase I, E subunit; n=2; D... 54 2e-06
UniRef50_Q8RBD2 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 54 2e-06
UniRef50_Q6FE68 Cluster: NADH dehydrogenase I chain E; n=5; Mora... 54 2e-06
UniRef50_Q0AWA4 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 54 2e-06
UniRef50_Q89AU3 Cluster: NADH-quinone oxidoreductase subunit E; ... 54 2e-06
UniRef50_Q1IS36 Cluster: NADH-quinone oxidoreductase, E subunit;... 53 3e-06
UniRef50_Q01WJ0 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 53 4e-06
UniRef50_A0UVM6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 53 4e-06
UniRef50_Q2FP98 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 53 4e-06
UniRef50_A5V6C3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 52 5e-06
UniRef50_Q3A461 Cluster: NADP-reducing hydrogenase chain A; n=5;... 52 6e-06
UniRef50_A0LJN9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 52 6e-06
UniRef50_Q2RHR8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 52 8e-06
UniRef50_Q2AG84 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 52 8e-06
UniRef50_Q4AMU5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 51 1e-05
UniRef50_Q0PIE2 Cluster: NAD(P)H-quinone oxidoreductase 24 kDa s... 51 1e-05
UniRef50_A0LLS9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 51 1e-05
UniRef50_A7IL17 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 50 2e-05
UniRef50_A5UZ48 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 50 2e-05
UniRef50_A1ALP3 Cluster: NADH-quinone oxidoreductase, E subunit;... 50 2e-05
UniRef50_Q4AHT8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 50 3e-05
UniRef50_O66842 Cluster: NADH-quinone oxidoreductase subunit E; ... 50 3e-05
UniRef50_Q749M0 Cluster: NAD-reducing hydrogenase, putative; n=4... 49 4e-05
UniRef50_Q2C5T5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 49 4e-05
UniRef50_Q98BW7 Cluster: NAD-dependent formate dehydrogenase gam... 49 6e-05
UniRef50_Q835I9 Cluster: NAD-dependent formate dehydrogenase, ga... 48 8e-05
UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=... 48 8e-05
UniRef50_Q6SGN4 Cluster: NADH-quinone oxidoreductase, E subunit;... 48 8e-05
UniRef50_Q89QJ0 Cluster: NADH dehydrogenase I chain E; n=16; Alp... 48 1e-04
UniRef50_A3JB74 Cluster: ATP synthase subunit E; n=1; Marinobact... 48 1e-04
UniRef50_A0QNT7 Cluster: Formate dehydrogenase, gamma subunit; n... 48 1e-04
UniRef50_Q6N1Z1 Cluster: NADH-ubiquinone dehydrogenase chain E; ... 47 2e-04
UniRef50_A0LGJ1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 47 2e-04
UniRef50_Q74GA4 Cluster: NADH dehydrogenase I, E subunit; n=6; G... 46 3e-04
UniRef50_Q0AVX7 Cluster: Fe-hydrogenase, gamma subunit; n=4; Syn... 46 3e-04
UniRef50_A6PPY8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 46 4e-04
UniRef50_A3YBB2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 46 4e-04
UniRef50_Q47WZ1 Cluster: Formate dehydrogenase, gamma subunit; n... 46 5e-04
UniRef50_A4M6K3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 46 5e-04
UniRef50_A3ETZ6 Cluster: NADH ubiquinone oxidoreductase; n=1; Le... 45 0.001
UniRef50_A1AP34 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 45 0.001
UniRef50_A0J5R7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 45 0.001
UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreducta... 44 0.002
UniRef50_Q2S5I9 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 44 0.002
UniRef50_Q608U6 Cluster: Formate dehydrogenase, gamma subunit; n... 44 0.002
UniRef50_A1FMP2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 44 0.002
UniRef50_A3DCI7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 43 0.003
UniRef50_Q057X2 Cluster: NADH dehydrogenase I chain E; n=1; Buch... 42 0.005
UniRef50_A6PMG8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 42 0.005
UniRef50_A0RMD2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kD... 42 0.005
UniRef50_UPI0000E87F9D Cluster: ATP synthase subunit E; n=1; Met... 42 0.009
UniRef50_Q28P85 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 42 0.009
UniRef50_A6VXL9 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 42 0.009
UniRef50_A3Z0U6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 40 0.021
UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=... 38 0.083
UniRef50_Q483I3 Cluster: Formate dehydrogenase, gamma subunit; n... 38 0.11
UniRef50_Q0AL75 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 38 0.14
UniRef50_A4XP94 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 37 0.19
UniRef50_Q63RZ3 Cluster: NAD-dependent formate dehydrogenase gam... 36 0.33
UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,... 36 0.58
UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 36 0.58
UniRef50_A7RRZ0 Cluster: Predicted protein; n=1; Nematostella ve... 33 3.1
UniRef50_Q5NPV1 Cluster: Two-component response regulator; n=3; ... 32 5.4
UniRef50_Q9Z5S2 Cluster: Torf protein; n=2; Zymomonas mobilis|Re... 32 5.4
UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;... 32 7.2
UniRef50_Q55Y42 Cluster: Putative uncharacterized protein; n=1; ... 32 7.2
UniRef50_A5I5J7 Cluster: Sensor protein; n=4; Clostridium botuli... 31 9.5
>UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor; n=64; cellular
organisms|Rep: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor - Homo sapiens
(Human)
Length = 249
Score = 181 bits (440), Expect = 8e-45
Identities = 79/111 (71%), Positives = 95/111 (85%)
Frame = +2
Query: 134 SLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPI 313
+LFVHRDTPE+NP PF+FT N KR+EA++ YPEGHK A++P+LDLAQR NG WLPI
Sbjct: 37 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPI 95
Query: 314 SAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
SAM+KVAE+L +P MRVYEVATFYTM+ R+P+GKYH+QVCTTTPC LR SD
Sbjct: 96 SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSD 146
>UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor; n=8;
Viridiplantae|Rep: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 255
Score = 144 bits (348), Expect = 1e-33
Identities = 60/110 (54%), Positives = 86/110 (78%)
Frame = +2
Query: 134 SLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPI 313
+L H D+P++ P +P+EF+ NQ +V+ +L+ YP +K+ A+IPLLDLAQ+ NGGWLP+
Sbjct: 31 ALNYHLDSPDNKPDLPWEFSEANQSKVKEILSYYPSNYKQSAVIPLLDLAQQQNGGWLPV 90
Query: 314 SAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
SAM+ VA+++ + +RVYEVATFY+MF R +GKYH+ VC TTPC +RGS
Sbjct: 91 SAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGS 140
>UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I,
NUHM_24kd subunit; n=5; Saccharomycetales|Rep: Potential
mitochondrial Complex I, NUHM_24kd subunit - Candida
albicans (Yeast)
Length = 243
Score = 143 bits (347), Expect = 1e-33
Identities = 67/108 (62%), Positives = 85/108 (78%)
Frame = +2
Query: 143 VHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAM 322
VHRDT EDNP+I FEF + N+KR E ++A YP +K+GA +PLLDL QR G + IS M
Sbjct: 31 VHRDTKEDNPNIAFEFNSENKKRAEEIIAKYPPQYKKGACMPLLDLGQRQLG-FTSISVM 89
Query: 323 HKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
+ VA++L++P MRVYEVATFYTM+ R P+GKY++QVCTTTPC L GSD
Sbjct: 90 NYVAKLLDMPPMRVYEVATFYTMYNRHPMGKYNLQVCTTTPCQLCGSD 137
>UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone
Oxidoreductase; n=3; Fungi/Metazoa group|Rep: Subunit
NUHM of protein NADH:Ubiquinone Oxidoreductase -
Yarrowia lipolytica (Candida lipolytica)
Length = 243
Score = 139 bits (336), Expect = 3e-32
Identities = 63/108 (58%), Positives = 83/108 (76%)
Frame = +2
Query: 143 VHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAM 322
VHR+T +NPSIPFEF+ N KR E ++A YP +K+ A++PLLD+ QR G + IS M
Sbjct: 32 VHRNTENNNPSIPFEFSPENMKRAEEVIAKYPPQYKKAAVMPLLDIGQRQLG-YTSISVM 90
Query: 323 HKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
+ VA++L +P MRVYEVATFYTM+ R P+G+YH+Q+CTTTPC L GSD
Sbjct: 91 NYVAKLLEMPPMRVYEVATFYTMYNRTPMGRYHLQICTTTPCQLCGSD 138
>UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=2; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit - Chlamydomonas reinhardtii
Length = 282
Score = 137 bits (332), Expect = 1e-31
Identities = 60/111 (54%), Positives = 84/111 (75%)
Frame = +2
Query: 131 DSLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLP 310
D +H+DTPE+N + FEF+ K V ++A YP +K+ A+IP+LD+ Q+ NGGWL
Sbjct: 46 DIFNIHKDTPENNAATSFEFSEATLKVVNDIIARYPPNYKQSAIIPVLDVTQQENGGWLS 105
Query: 311 ISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
++AM++VA++L++ +RVYEVATFYTMF R IGKYHVQ+C TTPC L+GS
Sbjct: 106 LAAMNRVAKLLDMAPIRVYEVATFYTMFNRTKIGKYHVQICGTTPCRLQGS 156
>UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11;
Pezizomycotina|Rep: NADH:ubiquinone oxidoreductase -
Aspergillus oryzae
Length = 270
Score = 137 bits (331), Expect = 1e-31
Identities = 63/110 (57%), Positives = 82/110 (74%)
Frame = +2
Query: 131 DSLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLP 310
DSL VHR+ P +NPSIPF F NQ+ ++ +L YP +K+ A++PLLDL QR +G +
Sbjct: 37 DSLSVHRNKPTNNPSIPFTFNEQNQRLIDEILKRYPPQYKKAAVMPLLDLGQRQHG-FTS 95
Query: 311 ISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRG 460
IS M++VA +L +P MRVYEVATFYTM+ R P+GKY VQ+CTTTPC L G
Sbjct: 96 ISVMNEVARLLEMPPMRVYEVATFYTMYNREPVGKYFVQLCTTTPCQLGG 145
>UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium
discoideum AX4|Rep: NADH dehydrogenase - Dictyostelium
discoideum AX4
Length = 247
Score = 132 bits (319), Expect = 4e-30
Identities = 62/111 (55%), Positives = 79/111 (71%)
Frame = +2
Query: 131 DSLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLP 310
D+L H +T ++N PF+FT N +VE +LA YP+ +++ A+IPLLDLAQR NGGW+
Sbjct: 35 DALSRHVETEDNNEHTPFDFTQENLVKVEKILAKYPKQYRQSALIPLLDLAQRQNGGWIS 94
Query: 311 ISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
+ AM KVA I + M YEVA+FYTMF R IG+ VQVCTTTPC LRGS
Sbjct: 95 LRAMDKVAHICGIAPMTAYEVASFYTMFNRTKIGENFVQVCTTTPCMLRGS 145
>UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase;
n=1; Ostreococcus tauri|Rep: Putative NADH-ubiquinone
oxidoreductase - Ostreococcus tauri
Length = 265
Score = 129 bits (311), Expect = 3e-29
Identities = 59/107 (55%), Positives = 79/107 (73%)
Frame = +2
Query: 143 VHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAM 322
VHRD PEDN ++ + F A + +V+A+L YP +KR AMIPLLDLAQ+ N G L ++ M
Sbjct: 26 VHRDVPEDNSTMTWTFEASVRPKVDAILRRYPSNYKRSAMIPLLDLAQQQNKGHLTLAMM 85
Query: 323 HKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
+ +A++L + +RVYEVATFY+MF R+ +GK HV VC TTPC LRGS
Sbjct: 86 NHIADVLEVAPIRVYEVATFYSMFNRQKMGKLHVMVCGTTPCMLRGS 132
>UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E;
n=18; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit E - Rickettsia felis (Rickettsia
azadi)
Length = 167
Score = 128 bits (310), Expect = 5e-29
Identities = 57/98 (58%), Positives = 69/98 (70%)
Frame = +2
Query: 173 SIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLP 352
S F F N E ++ YP KR A++PLLDLAQR NGGWLP+ A+ VA +L +P
Sbjct: 2 STNFTFDKKNLNLAEDIIKKYPPHGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLEMP 61
Query: 353 RMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
MR YEVATFY+MF + +GKYH+QVCTTTPCWL GSD
Sbjct: 62 YMRAYEVATFYSMFNLKRVGKYHIQVCTTTPCWLHGSD 99
>UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=5; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_8, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 263
Score = 126 bits (304), Expect = 2e-28
Identities = 57/111 (51%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Frame = +2
Query: 134 SLFV-HRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLP 310
++FV HR+ +++ S+PF+FT N K++EA+LA +P K+ IPLL LAQ+ N +L
Sbjct: 19 NIFVAHRNRDDNSDSVPFDFTDENYKKIEAILAKFPSNEKKSGTIPLLMLAQKQNNNFLS 78
Query: 311 ISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
+SAM K+A+IL +P M VYE A+FY+MF R +GK+H+QVC TTPC L GS
Sbjct: 79 LSAMKKIAKILEIPEMDVYETASFYSMFNRERVGKFHLQVCGTTPCQLCGS 129
>UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase,
mitochondrial, putative; n=6; Trypanosomatidae|Rep:
NADH-ubiquinone oxidoreductase, mitochondrial, putative
- Leishmania major
Length = 273
Score = 120 bits (290), Expect = 1e-26
Identities = 51/108 (47%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
Frame = +2
Query: 146 HRDTPEDNPSIPFEFTAPNQKRVE-ALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAM 322
H++T DN IP++FT + +++ +L +P G + A IPLL LAQ+ GG++P++AM
Sbjct: 40 HQNTDYDNTRIPWDFTTSSYEKIHNEILPKFPRGRRISATIPLLHLAQQQQGGYIPVTAM 99
Query: 323 HKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
+K+A+I +P M V+E TFY+MF R P+GKYH+Q C TTPC L G+D
Sbjct: 100 YKIAKICEVPPMHVFETVTFYSMFNRHPVGKYHIQFCRTTPCMLCGAD 147
>UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: NADH
dehydrogenase I, E subunit - Neorickettsia sennetsu
(strain Miyayama)
Length = 181
Score = 118 bits (283), Expect = 8e-26
Identities = 51/95 (53%), Positives = 69/95 (72%)
Frame = +2
Query: 182 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMR 361
F F+ N + V +LA YP KR A++PLL L QR + W+PI+AM VA++L LP ++
Sbjct: 24 FCFSEENSREVARILAKYPASRKRSAVLPLLHLVQRQHENWIPIAAMDHVAQLLGLPVIK 83
Query: 362 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
VYEVA+FY+MF P+GK+ ++VC TTPCWLRGSD
Sbjct: 84 VYEVASFYSMFNTAPVGKHTIRVCRTTPCWLRGSD 118
>UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit; n=1; Nyctotherus ovalis|Rep: Hydrogenosomal
NADH dehydrogenase 24 kDa subunit - Nyctotherus ovalis
Length = 259
Score = 117 bits (282), Expect = 1e-25
Identities = 53/109 (48%), Positives = 75/109 (68%)
Frame = +2
Query: 137 LFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPIS 316
L H +TPE+N FEFT N K + +LL YP+ +K+ A++ LL LAQ+ NG +L ++
Sbjct: 26 LVTHHETPENNDDTYFEFTPENYKIINSLLKRYPDNYKKSAVLYLLHLAQKQNGNFLTLA 85
Query: 317 AMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
AM+KVA+IL + + VYEVA FY+MF R +GK +Q+C TTPC L G+
Sbjct: 86 AMNKVAKILEMTNLNVYEVAAFYSMFNREKVGKIRLQICGTTPCLLCGA 134
>UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-PA
- Drosophila melanogaster (Fruit fly)
Length = 238
Score = 117 bits (281), Expect = 1e-25
Identities = 55/102 (53%), Positives = 71/102 (69%)
Frame = +2
Query: 161 EDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEI 340
E ++ FEF+ NQ+RV+ALLA YP+ +GA++PLLD+AQR G WL ISA+ VAE
Sbjct: 27 EIRKALKFEFSKDNQRRVKALLAWYPQAEWKGALLPLLDIAQRQQG-WLSISAVQAVAET 85
Query: 341 LNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
+ + M +E A FYTMF +P GKY V VCT+TPC LRG D
Sbjct: 86 IKIDPMEAFEAAQFYTMFFMKPRGKYVVSVCTSTPCKLRGGD 127
>UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;
n=8; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase, E subunit - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 222
Score = 116 bits (279), Expect = 3e-25
Identities = 55/101 (54%), Positives = 72/101 (71%), Gaps = 6/101 (5%)
Frame = +2
Query: 182 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNG------GWLPISAMHKVAEIL 343
F +TA N ++ +A++A YP G +R A++PLLDLAQR G GWLP+ + VA L
Sbjct: 20 FAWTAENAEKAKAVIARYPAGRQRSAVMPLLDLAQRQVGAETQTQGWLPVPVIEYVAAQL 79
Query: 344 NLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
++P +R YEVATFYTM+ P+G+YHVQVC TTPC LRGSD
Sbjct: 80 DMPFIRAYEVATFYTMYNLAPVGRYHVQVCGTTPCLLRGSD 120
>UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=5;
Rhodospirillales|Rep: NADH-quinone oxidoreductase chain
E - Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 227
Score = 115 bits (276), Expect = 6e-25
Identities = 51/100 (51%), Positives = 71/100 (71%), Gaps = 5/100 (5%)
Frame = +2
Query: 182 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNG-----GWLPISAMHKVAEILN 346
F F +++R+E +LA YP + A++PLLDLAQR G W+P +AM ++A L
Sbjct: 20 FSFDVQSEQRIEIILAKYPPARRASAVMPLLDLAQRQMGRETGSAWIPRAAMDEIARRLG 79
Query: 347 LPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
+ +RVYEVATFY M+ RP+G++H+Q+CTTTPCWLRGSD
Sbjct: 80 MAPIRVYEVATFYFMYNTRPVGRHHLQLCTTTPCWLRGSD 119
>UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Methylobacterium sp. 4-46|Rep: NADH-quinone
oxidoreductase, E subunit - Methylobacterium sp. 4-46
Length = 394
Score = 109 bits (262), Expect = 3e-23
Identities = 52/105 (49%), Positives = 66/105 (62%)
Frame = +2
Query: 149 RDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHK 328
R P + F FT N + EA +A YPEG + A+IPLL AQ NGGWLP A+
Sbjct: 5 RLAPAEQQPAAFAFTPENARWAEAQIAKYPEGRQASAVIPLLWRAQEQNGGWLPQKAIEA 64
Query: 329 VAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
VA+ L +P +RV EVATFYTMF P+G+Y +QVC T PC + G+
Sbjct: 65 VADELGMPHIRVLEVATFYTMFALEPVGRYWIQVCGTVPCDVCGA 109
>UniRef50_A5CES4 Cluster: NADH dehydrogenase I chain E; n=1;
Orientia tsutsugamushi Boryong|Rep: NADH dehydrogenase I
chain E - Orientia tsutsugamushi (strain Boryong)
(Rickettsia tsutsugamushi)
Length = 192
Score = 109 bits (262), Expect = 3e-23
Identities = 49/96 (51%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Frame = +2
Query: 185 EFTAPNQKRVEALLAI--YPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRM 358
EF+ N+ V A I YP G + A++ +LDLAQ N WL S + VA +L +P +
Sbjct: 8 EFSFSNETLVIAKKIINNYPAGKEASAVLAILDLAQNQNNNWLSNSCIEYVANLLKMPYI 67
Query: 359 RVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
+VYE+A+FYTMF +P+GKYH+Q+C TTPCWLRGSD
Sbjct: 68 KVYEIASFYTMFNLQPVGKYHIQICGTTPCWLRGSD 103
>UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 312
Score = 101 bits (243), Expect = 6e-21
Identities = 47/88 (53%), Positives = 65/88 (73%)
Frame = +2
Query: 131 DSLFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLP 310
DSL VHR+ P +NPSIPF+F N K ++ +L YP +K+ A++P+LDL QR + G+
Sbjct: 134 DSLSVHRNKPNNNPSIPFKFNEQNLKLIDEILKRYPPQYKKAAVMPILDLGQRQH-GFTS 192
Query: 311 ISAMHKVAEILNLPRMRVYEVATFYTMF 394
IS M++VA +L +P MRVYEVATFYTM+
Sbjct: 193 ISVMNEVARLLEMPPMRVYEVATFYTMY 220
>UniRef50_A7DLV4 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Methylobacterium extorquens PA1|Rep: NADH-quinone
oxidoreductase, E subunit - Methylobacterium extorquens
PA1
Length = 412
Score = 100 bits (240), Expect = 1e-20
Identities = 46/89 (51%), Positives = 57/89 (64%)
Frame = +2
Query: 182 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMR 361
F FT N +A YPEG + A+IPLL AQ NGGWLP A+ VA+ L +P +R
Sbjct: 16 FAFTPENADWARGQIAKYPEGRQASAVIPLLWKAQEQNGGWLPQKAIEAVADELGMPHIR 75
Query: 362 VYEVATFYTMFIRRPIGKYHVQVCTTTPC 448
V EVATFYTMF P+G++ +QVC T PC
Sbjct: 76 VLEVATFYTMFALEPVGRFWIQVCGTVPC 104
>UniRef50_Q83BQ9 Cluster: NADH dehydrogenase I, E subunit; n=3;
Coxiella burnetii|Rep: NADH dehydrogenase I, E subunit -
Coxiella burnetii
Length = 174
Score = 97.9 bits (233), Expect = 1e-19
Identities = 42/87 (48%), Positives = 59/87 (67%)
Frame = +2
Query: 206 KRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFY 385
K ++ LA YP KR A++P L Q+ N GWL +AM+ +A+ L LPR+ VYEVATFY
Sbjct: 16 KEIDRWLAKYPTDQKRSAVVPALLFVQKQNNGWLSKAAMNALADYLQLPRIWVYEVATFY 75
Query: 386 TMFIRRPIGKYHVQVCTTTPCWLRGSD 466
M+ +P+GK+ + +C PC+LRGSD
Sbjct: 76 DMYNLKPMGKHKISICQNVPCFLRGSD 102
>UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicaulis alexandrii HTCC2633
Length = 346
Score = 97.9 bits (233), Expect = 1e-19
Identities = 47/95 (49%), Positives = 63/95 (66%)
Frame = +2
Query: 182 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMR 361
F F ++ +V+ LA YPE K A+IPLL +AQ+ + W+ AM ++A +P +R
Sbjct: 14 FAFNEKSEAKVKFWLAKYPEERKASAVIPLLWIAQKQDN-WVSEPAMREIAARCGMPYIR 72
Query: 362 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
VYEVATFYTMF GK+ +QVC TTPCWLRG+D
Sbjct: 73 VYEVATFYTMFNLEQTGKHLIQVCGTTPCWLRGAD 107
>UniRef50_Q5FGV2 Cluster: NADH-quinone oxidoreductase chain E; n=5;
canis group|Rep: NADH-quinone oxidoreductase chain E -
Ehrlichia ruminantium (strain Gardel)
Length = 183
Score = 96.7 bits (230), Expect = 2e-19
Identities = 45/95 (47%), Positives = 62/95 (65%)
Frame = +2
Query: 182 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMR 361
F+F + K+ L YP K A++PLL +AQ+ GG +PI+AM+ +A+ L++ +
Sbjct: 18 FKFNKESLKQANDALNRYPSDRKSSAVMPLLHIAQKQCGGLIPIAAMNYIADFLDMKPIH 77
Query: 362 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
VYEVA FY+M+ GKY VQVC TTPCWL GSD
Sbjct: 78 VYEVAKFYSMYNLSVTGKYLVQVCRTTPCWLCGSD 112
>UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9;
Rhizobiales|Rep: NADH dehydrogenase I, E subunit -
Brucella suis
Length = 237
Score = 95.9 bits (228), Expect = 4e-19
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Frame = +2
Query: 182 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMR 361
F F A N+ +A YPEG ++ A+IPLL AQ G W+ +++ VA +LN+P +R
Sbjct: 16 FAFNAENEAWAHKTIAKYPEGRQQSAVIPLLMRAQEQEG-WVTKASIEYVAAMLNMPLIR 74
Query: 362 VYEVATFYTMFIRRPIG-KYHVQVCTTTPCWLRGSD 466
V EVATFYT F +P+G + H+QVC TTPC LRGS+
Sbjct: 75 VLEVATFYTQFQLKPVGSRAHIQVCGTTPCMLRGSE 110
>UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2;
Bacteroidetes|Rep: NADH dehydrogenase I chain E -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 177
Score = 92.7 bits (220), Expect = 4e-18
Identities = 39/93 (41%), Positives = 62/93 (66%)
Frame = +2
Query: 182 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMR 361
F+F+ + K+++ + A YPEG ++ A++P+L +AQ GGWLP M VA +L++ +
Sbjct: 8 FQFSEASLKKIQEMKARYPEGRQKSALLPVLHMAQDELGGWLPAPLMDYVASLLDITPIE 67
Query: 362 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRG 460
VYEVA+FY+M+ +P+GK + C T PC L G
Sbjct: 68 VYEVASFYSMYNLKPVGKCMFEFCQTGPCCLNG 100
>UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1;
n=21; Rhizobiales|Rep: NADH-quinone oxidoreductase
subunit E 1 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 275
Score = 91.9 bits (218), Expect = 6e-18
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Frame = +2
Query: 182 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMR 361
F F+ N EA + YPEG ++ A+IPLL AQ +G W+ +A+ VA++L + +R
Sbjct: 16 FAFSKENAAWAEATIKKYPEGREQSAVIPLLMRAQEQDG-WVTRAAIESVADMLGMAYIR 74
Query: 362 VYEVATFYTMFIRRPIG-KYHVQVCTTTPCWLRGSD 466
V EVATFYT F +P+G + HVQVC TTPC LRG++
Sbjct: 75 VLEVATFYTQFQLQPVGTRAHVQVCGTTPCMLRGAE 110
>UniRef50_A6H1R0 Cluster: NADH dehydrogenase I, E subunit; n=2;
Bacteroidetes|Rep: NADH dehydrogenase I, E subunit -
Flavobacterium psychrophilum (strain JIP02/86 / ATCC
49511)
Length = 176
Score = 91.1 bits (216), Expect = 1e-17
Identities = 40/86 (46%), Positives = 57/86 (66%)
Frame = +2
Query: 209 RVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYT 388
R+E L + YPE ++ A++P+L Q + WL I KVAEIL++ + VYEV +FYT
Sbjct: 19 RIEELCSHYPEDKRKSALLPVLHEVQDAHENWLSIELQDKVAEILHIKPVEVYEVVSFYT 78
Query: 389 MFIRRPIGKYHVQVCTTTPCWLRGSD 466
M+ RRPIGKY + C T+PC L G++
Sbjct: 79 MYNRRPIGKYMFEFCQTSPCCLNGTE 104
>UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1;
n=3; Bacteria|Rep: NADH-ubiquinone dehydrogenase chain E
1 - Rhizobium loti (Mesorhizobium loti)
Length = 424
Score = 89.8 bits (213), Expect = 3e-17
Identities = 42/98 (42%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +2
Query: 176 IPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPR 355
+ F F N + + YP+G ++ A+IPLL LAQ G W+ +A+ ++++L +PR
Sbjct: 14 VSFAFNRANAAAAKQWIKKYPKGREQSAIIPLLMLAQEQEG-WVTKAAIETISDMLGMPR 72
Query: 356 MRVYEVATFYTMFIRRPIG-KYHVQVCTTTPCWLRGSD 466
+R EVATFYT + P+G + H+QVC TTPC LRGS+
Sbjct: 73 IRGLEVATFYTQYQLNPVGTRAHIQVCGTTPCMLRGSE 110
>UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicola batsensis HTCC2597
Length = 460
Score = 87.8 bits (208), Expect = 1e-16
Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = +2
Query: 143 VHRDTPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAM 322
+H+D PE F FT NQK EA + YPEG + A+IPLL AQ GWL A+
Sbjct: 5 LHKDQPES-----FAFTPENQKWAEAQMTKYPEGRQASAIIPLLWRAQEQE-GWLTRPAI 58
Query: 323 HKVAEILNLPRMRVYEVATFYTMFIRRPIGKY-HVQVCTTTPCWLRGSD 466
+A +L++ +R EVATFY MF P+G HVQ+C TT C + G++
Sbjct: 59 EHIAAMLDMAYIRALEVATFYFMFQLAPVGSVAHVQICGTTSCMICGAE 107
>UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24 Kd
subunit family protein; n=2; Trichomonas vaginalis|Rep:
Respiratory-chain NADH dehydrogenase 24 Kd subunit
family protein - Trichomonas vaginalis G3
Length = 201
Score = 85.4 bits (202), Expect = 6e-16
Identities = 40/94 (42%), Positives = 60/94 (63%)
Frame = +2
Query: 185 EFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRV 364
+F +Q +V+A+LA YP+ +KR A IPLL L QR NGG+L + +++I+ + RV
Sbjct: 24 DFKFSDQSKVDAILAKYPKENKRAATIPLLHLGQRENGGYLTTGVLQAISKIVGVTAGRV 83
Query: 365 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
+E A FY+MF +P + V+VC C+L GSD
Sbjct: 84 HETACFYSMFRFQPPNNHIVEVCKGLSCYLTGSD 117
>UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=22;
Alphaproteobacteria|Rep: NADH-quinone oxidoreductase
chain 2 - Paracoccus denitrificans
Length = 239
Score = 82.6 bits (195), Expect = 4e-15
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = +2
Query: 182 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMR 361
FEFT N + A + YPEG ++ A+IP+L AQ G WL A+ A++L +P +R
Sbjct: 13 FEFTPANLEWARAQMTKYPEGRQQSAIIPVLWRAQEQEG-WLSRPAIEYCADLLGMPYIR 71
Query: 362 VYEVATFYTMFIRRPIGKY-HVQVCTTTPCWLRGSD 466
EVATFY MF +P+G H+Q+C TT C + G++
Sbjct: 72 ALEVATFYFMFQLQPVGSVAHIQICGTTTCMICGAE 107
>UniRef50_P56910 Cluster: NADH-quinone oxidoreductase subunit E 2;
n=3; Rhizobiaceae|Rep: NADH-quinone oxidoreductase
subunit E 2 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 168
Score = 78.6 bits (185), Expect = 6e-14
Identities = 38/88 (43%), Positives = 60/88 (68%)
Frame = +2
Query: 203 QKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATF 382
++ +EA A YP+ +R A++P L +AQ+ +G LP + +VA+IL + R+ VYE+ATF
Sbjct: 4 REEIEAAAARYPD--RRSAIMPALMIAQKEHGH-LPGPVLEEVAQILGVERVWVYELATF 60
Query: 383 YTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
YT+F PIG++H+Q+C C L GS+
Sbjct: 61 YTLFHTEPIGRFHLQLCDNVSCMLCGSE 88
>UniRef50_Q9PGJ1 Cluster: NADH-ubiquinone oxidoreductase, NQO2
subunit; n=13; Gammaproteobacteria|Rep: NADH-ubiquinone
oxidoreductase, NQO2 subunit - Xylella fastidiosa
Length = 175
Score = 78.2 bits (184), Expect = 8e-14
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +2
Query: 212 VEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTM 391
++ LA +P KR A++ L AQ N GWL + VA+ L++P + YEVATFY+M
Sbjct: 27 IDHWLAKFPADQKRSALLQGLYAAQEQNQGWLTDELIAAVAKYLDIPSVWAYEVATFYSM 86
Query: 392 FIRRPIGKYHVQVCTTTPCWLRGSD 466
F R +G+++V CT CWL G++
Sbjct: 87 FETRKVGRHNVAFCTNVSCWLNGAE 111
>UniRef50_Q0PQQ4 Cluster: NADH dehydrogenase I E subunit; n=1;
Endoriftia persephone 'Hot96_1+Hot96_2'|Rep: NADH
dehydrogenase I E subunit - Endoriftia persephone
'Hot96_1+Hot96_2'
Length = 123
Score = 78.2 bits (184), Expect = 8e-14
Identities = 36/104 (34%), Positives = 61/104 (58%)
Frame = +2
Query: 155 TPEDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVA 334
T E N + F++ ++ ++ +A YP ++ A++ L + Q NGGWL + M VA
Sbjct: 3 TTEANNKVEL-FSSEVREEIDRWVAKYPAEWRQSAVMAALRIVQDANGGWLTTALMDDVA 61
Query: 335 EILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
L++ + VYEVATFY+M+ +P+GK+ + +CT C + SD
Sbjct: 62 AYLDMAPIAVYEVATFYSMYELKPVGKHKICICTNVSCMINNSD 105
>UniRef50_Q82TU7 Cluster: Respiratory-chain NADH dehydrogenase 24 Kd
subunit; n=27; Proteobacteria|Rep: Respiratory-chain
NADH dehydrogenase 24 Kd subunit - Nitrosomonas europaea
Length = 162
Score = 77.4 bits (182), Expect = 1e-13
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = +2
Query: 206 KRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFY 385
++++ +A YP K+ A++ L +AQ G WL M +A+ L +P + VYEVATFY
Sbjct: 12 RKIDREVAKYPADRKQSAVMSALAIAQDEKG-WLATETMDFIADYLEMPAIAVYEVATFY 70
Query: 386 TMFIRRPIGKYHVQVCTTTPCWLRGSD 466
M+ +P+GKY + VCT PC L G +
Sbjct: 71 NMYNLKPVGKYKLTVCTNLPCALSGGN 97
>UniRef50_A1WXW3 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Halorhodospira halophila SL1|Rep: NADH-quinone
oxidoreductase, E subunit - Halorhodospira halophila
(strain DSM 244 / SL1) (Ectothiorhodospirahalophila
(strain DSM 244 / SL1))
Length = 170
Score = 77.4 bits (182), Expect = 1e-13
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +2
Query: 194 APNQKRVEALLAIYPEGH--KRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVY 367
A ++R++ LA YP+ + A+IP L + Q NGGWL S + A+ + +PR +
Sbjct: 13 ADQRRRIDHWLAKYPDDEQGRASAIIPALHILQDDNGGWLERSHVAAAADYIGMPRASAF 72
Query: 368 EVATFYTMF-IRRPIGKYHVQVCTTTPCWLRGSD 466
EVATFY+MF + P+G++ V CT C L G+D
Sbjct: 73 EVATFYSMFHLDEPVGRHKVNFCTNISCCLNGAD 106
>UniRef50_Q6MIR6 Cluster: NADH dehydrogenase I chain E; n=1;
Bdellovibrio bacteriovorus|Rep: NADH dehydrogenase I
chain E - Bdellovibrio bacteriovorus
Length = 159
Score = 76.2 bits (179), Expect = 3e-13
Identities = 36/93 (38%), Positives = 57/93 (61%)
Frame = +2
Query: 182 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMR 361
F+ + V++ LA Y K A+IP L +AQ+ N G++ + +++++++P R
Sbjct: 4 FKLSDSGLAAVKSELARYEA--KESAIIPSLYIAQKENNGFITPEIIRTLSQVMDIPEAR 61
Query: 362 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRG 460
+ EV FYTMF ++P+GKYHVQVCT C L G
Sbjct: 62 INEVFKFYTMFNQKPVGKYHVQVCTNISCALEG 94
>UniRef50_A5UZH6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=5; Chloroflexi (class)|Rep: NADH-quinone
oxidoreductase, E subunit - Roseiflexus sp. RS-1
Length = 174
Score = 75.4 bits (177), Expect = 6e-13
Identities = 37/85 (43%), Positives = 58/85 (68%)
Frame = +2
Query: 212 VEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTM 391
+EA++A YP HK A++PLL +AQ G+L +AM +VAE+L++P V+EVA FY++
Sbjct: 11 IEAIIARYP--HKPSAVLPLLFIAQ-DEYGYLTEAAMREVAELLDMPPTDVFEVAGFYSL 67
Query: 392 FIRRPIGKYHVQVCTTTPCWLRGSD 466
+P+GK+ +QVC PC G++
Sbjct: 68 LYEQPVGKWVLQVCDDVPCAFCGAE 92
>UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Solibacter usitatus Ellin6076|Rep: NADH-quinone
oxidoreductase, E subunit - Solibacter usitatus (strain
Ellin6076)
Length = 160
Score = 74.1 bits (174), Expect = 1e-12
Identities = 38/88 (43%), Positives = 52/88 (59%)
Frame = +2
Query: 203 QKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATF 382
+ R E LL YP G +R AMIP+L AQ G + + +VA + + ++V EV T+
Sbjct: 8 EARFEKLLTSYPPGRQRSAMIPMLMYAQ-DELGCVSDELIAEVARRIGVTPLQVNEVLTY 66
Query: 383 YTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
Y+M R+P+GKYHVQVCT C L D
Sbjct: 67 YSMLHRKPLGKYHVQVCTNISCLLHDGD 94
>UniRef50_A6FCN2 Cluster: NuoE2 NADH I CHAIN E; n=1; Moritella sp.
PE36|Rep: NuoE2 NADH I CHAIN E - Moritella sp. PE36
Length = 207
Score = 74.1 bits (174), Expect = 1e-12
Identities = 39/93 (41%), Positives = 61/93 (65%)
Frame = +2
Query: 185 EFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRV 364
E TAP + ++ YP +R A++P L LAQ G+L +A +AEIL++P + V
Sbjct: 13 ELTAP----IADIVKCYPT--QRSAIMPALYLAQ-DTYGFLDETAYRAIAEILDIPEIWV 65
Query: 365 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
+E+A+FYT++ + IGKY++Q+CT PC LRG+
Sbjct: 66 FELASFYTLYKNKKIGKYNLQLCTNVPCMLRGA 98
>UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1;
Symbiobacterium thermophilum|Rep: NADH dehydrogenase I
subunit E - Symbiobacterium thermophilum
Length = 274
Score = 73.3 bits (172), Expect = 2e-12
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +2
Query: 212 VEALLAIYPEGHKRGAMIPLLDLAQRXNGG-WLPISAMHKVAEILNLPRMRVYEVATFYT 388
VEA+L YPEG +R A++PLL LA R G ++ S + VAEI + V V +FYT
Sbjct: 18 VEAILRRYPEGRERSAILPLLHLAMREREGRYIAQSDIEAVAEICGVAPSYVQSVCSFYT 77
Query: 389 MFIRRPIGKYHVQVCTTTPCWL 454
MF R+P+GKY + VC C L
Sbjct: 78 MFRRQPVGKYLITVCGNMACHL 99
>UniRef50_A7CUG1 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Opitutaceae bacterium TAV2|Rep: NADH-quinone
oxidoreductase, E subunit - Opitutaceae bacterium TAV2
Length = 163
Score = 71.7 bits (168), Expect = 7e-12
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +2
Query: 206 KRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFY 385
+R++ ++ YP KR A +PLL L Q + G++ AM +A+ L + R+ V EV TFY
Sbjct: 9 QRIDEVITHYPV--KRSATLPLLHLIQE-DAGYISDEAMEWIADKLGIERIHVLEVVTFY 65
Query: 386 TMFIRRPIGKYHVQVCTTTPCWLRG 460
MF R+PIG+ H++VC T C L G
Sbjct: 66 PMFRRKPIGRRHIKVCRTLSCALMG 90
>UniRef50_A4SXP9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=51; Burkholderiales|Rep: NADH-quinone oxidoreductase,
E subunit - Polynucleobacter sp. QLW-P1DMWA-1
Length = 168
Score = 70.9 bits (166), Expect = 1e-11
Identities = 33/77 (42%), Positives = 48/77 (62%)
Frame = +2
Query: 224 LAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRR 403
+A YP HK+ A++ L +A + GW+ + VA+IL +P + V EVATFY M+ +
Sbjct: 19 IAKYPAEHKQSAVMACL-IAAQTEVGWVSPEVIEAVAQILEMPTIAVDEVATFYNMYNTK 77
Query: 404 PIGKYHVQVCTTTPCWL 454
PIGKY + +CT PC L
Sbjct: 78 PIGKYKLVICTNLPCQL 94
>UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=5; Actinomycetales|Rep: NADH-quinone oxidoreductase, E
subunit - Frankia sp. (strain CcI3)
Length = 262
Score = 69.7 bits (163), Expect = 3e-11
Identities = 35/93 (37%), Positives = 49/93 (52%)
Frame = +2
Query: 188 FTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVY 367
F+ + ++A YP G R A++PLL L Q G + + A++L + R V
Sbjct: 3 FSPETHAAAQEIIARYPAGRSRSALLPLLHLVQAEQG-CVTAQGVAFCADVLGITRAEVG 61
Query: 368 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
VATFYTM+ R P+G Y V VCT C L G +
Sbjct: 62 AVATFYTMYKRHPVGDYLVSVCTNLSCALLGGE 94
>UniRef50_Q092T1 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit; n=2; Cystobacterineae|Rep: NADH-ubiquinone
oxidoreductase 24 kDa subunit - Stigmatella aurantiaca
DW4/3-1
Length = 162
Score = 69.3 bits (162), Expect = 4e-11
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +2
Query: 188 FTAPNQKRVEA----LLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPR 355
FT QK+ +A +L+ YP K M+P L L Q G W P + VA+ L +
Sbjct: 6 FTPEEQKKFDAGISEILSHYPPDRKSAGMLPALRLLQDLKG-WCPPEGIRLVAKNLEVTP 64
Query: 356 MRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
R YEVA+FY M+ + GKY + VCT C LRG++
Sbjct: 65 ERAYEVASFYVMYHLKKPGKYTIDVCTNLSCSLRGAE 101
>UniRef50_Q6MDR2 Cluster: Putative NADH-ubiquinone oxidoreductase
chain E; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Putative NADH-ubiquinone oxidoreductase chain
E - Protochlamydia amoebophila (strain UWE25)
Length = 159
Score = 68.1 bits (159), Expect = 9e-11
Identities = 33/79 (41%), Positives = 47/79 (59%)
Frame = +2
Query: 230 IYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPI 409
+YP +KR A+IP L LAQ G +LPI +++A + +L V + TFY MF P+
Sbjct: 4 LYP--NKRSALIPALHLAQAEKG-YLPIEVQNELAFLFDLEPSEVNSIVTFYDMFFEEPV 60
Query: 410 GKYHVQVCTTTPCWLRGSD 466
GK+ + VC C LRG+D
Sbjct: 61 GKHVIHVCKNISCMLRGAD 79
>UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=1;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 574
Score = 66.9 bits (156), Expect = 2e-10
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +2
Query: 212 VEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTM 391
+ LL YPE K+ A++P L LAQ+ N L + VAE++++P + Y +AT+Y+M
Sbjct: 10 IHRLLGRYPE--KQSALMPALMLAQKENANRLDQDDIRTVAELVDVPFGKAYGLATYYSM 67
Query: 392 F-IRRPIGKYHVQVCTTTPCWLRGS 463
+ + +P+G+YH+QV T P L G+
Sbjct: 68 YNVEKPVGRYHLQVDTNIPATLMGA 92
>UniRef50_A3THI9 Cluster: ATP synthase subunit E; n=3;
Actinomycetales|Rep: ATP synthase subunit E - Janibacter
sp. HTCC2649
Length = 417
Score = 66.1 bits (154), Expect = 4e-10
Identities = 37/84 (44%), Positives = 50/84 (59%)
Frame = +2
Query: 215 EALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMF 394
E ++A YP+ KR A++PLL L Q +G ++ + AE+L L R V VATFYT +
Sbjct: 36 ELVVAKYPQ--KRSALLPLLHLVQSVDG-YVTGRGIDFCAEVLELSRAEVSGVATFYTQY 92
Query: 395 IRRPIGKYHVQVCTTTPCWLRGSD 466
R P G+Y V VCT T C + G D
Sbjct: 93 KRHPNGEYTVGVCTNTLCAIMGGD 116
>UniRef50_A1AVR6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=2; sulfur-oxidizing symbionts|Rep: NADH-quinone
oxidoreductase, E subunit - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 157
Score = 65.7 bits (153), Expect = 5e-10
Identities = 30/88 (34%), Positives = 50/88 (56%)
Frame = +2
Query: 203 QKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATF 382
+K+++A +A YP+ K A++ L + Q N L + VA+ L++P + V EVATF
Sbjct: 7 KKQIDAWIAKYPKDRKSSAVMQTLKIIQAENENKLSADTIQAVADYLDMPDIAVQEVATF 66
Query: 383 YTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
Y + + +GKY ++ C C L G+D
Sbjct: 67 YENYNHKKVGKYVIRFCHNISCMLNGAD 94
>UniRef50_Q0EZQ5 Cluster: NADH dehydrogenase I chain E; n=1;
Mariprofundus ferrooxydans PV-1|Rep: NADH dehydrogenase
I chain E - Mariprofundus ferrooxydans PV-1
Length = 170
Score = 64.5 bits (150), Expect = 1e-09
Identities = 34/93 (36%), Positives = 53/93 (56%)
Frame = +2
Query: 188 FTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVY 367
F+ + L+ YP + A++P+L +AQ + G+L + VA++L L M+V
Sbjct: 12 FSEARLAEIAELVKRYPGA--QSALMPVLYMAQE-DFGYLSMDVQQHVADVLGLRLMQVR 68
Query: 368 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
EV TFYTMF +P G Y ++VCT C L G++
Sbjct: 69 EVVTFYTMFREKPCGTYLLEVCTNAGCMLNGAN 101
>UniRef50_P0AFD3 Cluster: NADH-quinone oxidoreductase subunit E;
n=66; Gammaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit E - Shigella flexneri
Length = 166
Score = 64.5 bits (150), Expect = 1e-09
Identities = 30/93 (32%), Positives = 53/93 (56%)
Frame = +2
Query: 182 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMR 361
FE +A ++ +E + Y + R A I L + Q+ G W+P A+H +A++L +P
Sbjct: 12 FELSAAEREAIEHEMHHYED--PRAASIEALKIVQKQRG-WVPDGAIHAIADVLGIPASD 68
Query: 362 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRG 460
V VATFY+ R+P+G++ ++ C + C + G
Sbjct: 69 VEGVATFYSQIFRQPVGRHVIRYCDSVVCHING 101
>UniRef50_Q0AZ71 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit-like protein precursor; n=4; Clostridiales|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit-like
protein precursor - Syntrophomonas wolfei subsp. wolfei
(strain Goettingen)
Length = 182
Score = 64.1 bits (149), Expect = 1e-09
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +2
Query: 221 LLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIR 400
L I + H++G++I +L AQ G +LP+S + +A L + +VY +ATFYT F
Sbjct: 26 LKIIEEKRHEKGSLIAILQQAQDIYG-YLPLSVLKCIARELGIKPAKVYGIATFYTQFRL 84
Query: 401 RPIGKYHVQVCTTTPCWLRGSD 466
+P GKY + C T C + GS+
Sbjct: 85 QPAGKYQIMFCQGTACHVNGSE 106
>UniRef50_A7HII1 Cluster: NADH-quinone oxidoreductase, E subunit;
n=2; Anaeromyxobacter|Rep: NADH-quinone oxidoreductase,
E subunit - Anaeromyxobacter sp. Fw109-5
Length = 188
Score = 63.3 bits (147), Expect = 3e-09
Identities = 36/97 (37%), Positives = 48/97 (49%)
Frame = +2
Query: 176 IPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPR 355
+P E + + +L YP K AM+P L + Q G +L + A+ L
Sbjct: 30 LPREKVEHFDRDLAEVLRRYPPDRKAAAMLPALRIGQEIFG-YLTPAVQRLAADRLGTSP 88
Query: 356 MRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
R EVATFY MF RPIG++ V+VCT C L G D
Sbjct: 89 ARAEEVATFYVMFNTRPIGRHLVEVCTNVSCCLTGGD 125
>UniRef50_Q6A6G2 Cluster: NADH dehydrogenase I chain E; n=1;
Propionibacterium acnes|Rep: NADH dehydrogenase I chain
E - Propionibacterium acnes
Length = 261
Score = 62.9 bits (146), Expect = 3e-09
Identities = 30/78 (38%), Positives = 47/78 (60%)
Frame = +2
Query: 233 YPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIG 412
YP+ R A++P+L L Q +G P+ + AE+L + +V VATFYTM+ + P G
Sbjct: 51 YPDS--RSALLPILHLVQSVDGRISPVG-IETAAEVLGITTAQVSGVATFYTMYKKHPAG 107
Query: 413 KYHVQVCTTTPCWLRGSD 466
++H+ VCTT C + G +
Sbjct: 108 QHHIGVCTTALCAVMGGE 125
>UniRef50_A7HLQ9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=3; Thermotogaceae|Rep: NADH-quinone oxidoreductase, E
subunit - Fervidobacterium nodosum Rt17-B1
Length = 161
Score = 62.9 bits (146), Expect = 3e-09
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +2
Query: 248 KRGAMIPLLDLAQ-RXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 424
+R ++ LL Q ++P +AE LN+P +VYEV TFYTMF +P GKY +
Sbjct: 20 ERDMLVYLLHRVQDHYQSHYIPPEVGEMIAEELNIPSSKVYEVLTFYTMFSTKPRGKYII 79
Query: 425 QVCTTTPCWLRG 460
+VCT+ PC + G
Sbjct: 80 RVCTSLPCHVPG 91
>UniRef50_Q746S5 Cluster: NADH dehydrogenase I, E subunit; n=4;
Desulfuromonadales|Rep: NADH dehydrogenase I, E subunit
- Geobacter sulfurreducens
Length = 162
Score = 61.7 bits (143), Expect = 8e-09
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = +2
Query: 251 RGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQV 430
R A + ++ QR + GWL A+ + AE+L L ++V E+ATFY M RRP+GK + V
Sbjct: 21 REAAVDVMKALQR-HYGWLTDEAVGEAAELLGLTPLQVEELATFYEMIYRRPVGKRVIHV 79
Query: 431 CTTTPCWLRGSD 466
C + CW G +
Sbjct: 80 CDSISCWALGGE 91
>UniRef50_Q2LYE8 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit NuoE; n=1; Syntrophus aciditrophicus SB|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit NuoE -
Syntrophus aciditrophicus (strain SB)
Length = 173
Score = 61.7 bits (143), Expect = 8e-09
Identities = 30/84 (35%), Positives = 51/84 (60%)
Frame = +2
Query: 209 RVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYT 388
++ +++ Y +G K A+ L DL + +LP A+ V++ L +P R+YE+ATFY
Sbjct: 22 KIREIISKY-DGEKSAAVAVLQDLQEEFR--YLPKEALTIVSDELQVPLSRIYEIATFYN 78
Query: 389 MFIRRPIGKYHVQVCTTTPCWLRG 460
+F +P GKY ++VC T C ++G
Sbjct: 79 VFSLKPRGKYLIEVCAGTACHVQG 102
>UniRef50_A3ERJ3 Cluster: NADH ubiquinone oxidoreductase 24 kD
subunit; n=2; Leptospirillum|Rep: NADH ubiquinone
oxidoreductase 24 kD subunit - Leptospirillum sp. Group
II UBA
Length = 168
Score = 61.7 bits (143), Expect = 8e-09
Identities = 26/73 (35%), Positives = 46/73 (63%)
Frame = +2
Query: 245 HKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 424
++ GA++ +L Q G ++P A+ V EIL +P+ ++Y V TFY+ F + P GK+ +
Sbjct: 23 NREGAVVQILQKVQEKYG-YVPADALEFVGEILEIPKSKMYGVLTFYSQFYQEPRGKFVL 81
Query: 425 QVCTTTPCWLRGS 463
++C T C +RG+
Sbjct: 82 KICVGTACHVRGA 94
>UniRef50_Q5JIQ1 Cluster: NADH:ubiquinone oxidoreductase, subunit E;
n=2; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase, subunit E - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 154
Score = 61.7 bits (143), Expect = 8e-09
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +2
Query: 257 AMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCT 436
++IPLL Q G+LP + ++A L +P RVY VATFY F P+GKY V+VC
Sbjct: 17 SLIPLLQRTQE-RFGYLPREVLEEIANYLGIPLSRVYGVATFYAQFRFEPLGKYVVKVCH 75
Query: 437 TTPCWLRGS 463
T C + G+
Sbjct: 76 GTACHVNGA 84
>UniRef50_Q9WXM7 Cluster: NADP-reducing hydrogenase, subunit A; n=4;
Thermotogaceae|Rep: NADP-reducing hydrogenase, subunit A
- Thermotoga maritima
Length = 176
Score = 61.3 bits (142), Expect = 1e-08
Identities = 27/73 (36%), Positives = 46/73 (63%)
Frame = +2
Query: 248 KRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 427
K+ A+I +L AQ G +LP + +++ L++P +VY V TFY F +P GK+ ++
Sbjct: 38 KKDALIQVLHKAQELFG-YLPADVLEYISDKLDVPLSKVYGVVTFYNFFSTKPKGKHQIK 96
Query: 428 VCTTTPCWLRGSD 466
VC T C+++G+D
Sbjct: 97 VCLGTACYVKGAD 109
>UniRef50_Q8ABI7 Cluster: NADH-ubiquinone oxidoreductase subunit;
n=3; Bacteroides|Rep: NADH-ubiquinone oxidoreductase
subunit - Bacteroides thetaiotaomicron
Length = 158
Score = 61.3 bits (142), Expect = 1e-08
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = +2
Query: 242 GHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYH 421
G+ G +I +L AQ +G +LP +A L +P +VY V TFYT F P GK+
Sbjct: 22 GNNAGELINILHEAQHLHG-YLPEEMQRIIASKLRIPVSKVYGVVTFYTFFTMTPKGKHP 80
Query: 422 VQVCTTTPCWLRGSD 466
+ VC T C++RGS+
Sbjct: 81 ISVCMGTACYVRGSE 95
>UniRef50_Q3ZXM4 Cluster: Hydrogenase subunit HymA; n=13; cellular
organisms|Rep: Hydrogenase subunit HymA -
Dehalococcoides sp. (strain CBDB1)
Length = 161
Score = 61.3 bits (142), Expect = 1e-08
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +2
Query: 269 LLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPC 448
LL + + N WLP A++KV++ LN+P RVY VATFY +F P GK++V VC T C
Sbjct: 35 LLKIQKEYN--WLPKEALYKVSQTLNVPVNRVYHVATFYKLFSVIPKGKHNVSVCVGTAC 92
Query: 449 WLRGS 463
+ G+
Sbjct: 93 HVFGA 97
>UniRef50_A6PRE1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Victivallis vadensis ATCC BAA-548|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Victivallis vadensis ATCC BAA-548
Length = 176
Score = 61.3 bits (142), Expect = 1e-08
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = +2
Query: 248 KRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 427
+RG++I +L AQ G +L VA LN+ R VY V +FY+ FI +PIG+Y +
Sbjct: 41 RRGSLIQILHRAQHLFG-YLSEEVQSFVAARLNISRAEVYGVISFYSYFIDQPIGRYKIN 99
Query: 428 VCTTTPCWLRGS 463
VCT T C+++G+
Sbjct: 100 VCTGTACFVKGA 111
>UniRef50_A4J528 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Desulfotomaculum reducens MI-1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Desulfotomaculum reducens MI-1
Length = 158
Score = 61.3 bits (142), Expect = 1e-08
Identities = 31/88 (35%), Positives = 53/88 (60%)
Frame = +2
Query: 200 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVAT 379
NQ +++AL A Y +G+ G ++ + + + + G+LP + + AE L +P VY VAT
Sbjct: 10 NQSKLDALFAQY-KGNPNGLIVVMAAIQE--SQGYLPKDLLVRTAEELGVPLSDVYGVAT 66
Query: 380 FYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
FY F RP G++ V +C T C+++G+
Sbjct: 67 FYAAFSLRPRGRHSVNLCLGTACYVKGA 94
>UniRef50_P65574 Cluster: NADH-quinone oxidoreductase subunit E;
n=23; Actinomycetales|Rep: NADH-quinone oxidoreductase
subunit E - Mycobacterium bovis
Length = 252
Score = 60.5 bits (140), Expect = 2e-08
Identities = 36/98 (36%), Positives = 54/98 (55%)
Frame = +2
Query: 173 SIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLP 352
S P + A + + ++ YP+ +R A++PLL L Q + +L + + A+ L L
Sbjct: 31 SYPPDVLARLEVDAKEIIGRYPD--RRSALLPLLHLVQGEDS-YLTPAGLRFCADQLGLT 87
Query: 353 RMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
V VA+FYTM+ RRP G+Y V VCT T C + G D
Sbjct: 88 GAEVSAVASFYTMYRRRPTGEYLVGVCTNTLCAVMGGD 125
>UniRef50_Q608Y0 Cluster: NADH dehydrogenase I, E subunit; n=5;
Bacteria|Rep: NADH dehydrogenase I, E subunit -
Methylococcus capsulatus
Length = 157
Score = 59.3 bits (137), Expect = 4e-08
Identities = 23/74 (31%), Positives = 42/74 (56%)
Frame = +2
Query: 245 HKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 424
H A I L++ QR +G W+ + ++AE+L + + +ATFY + RRP+G+ +
Sbjct: 20 HPSAAAIEALNIVQRSHG-WISDELLQEIAELLGMSPAELDSIATFYNLIYRRPVGRRVI 78
Query: 425 QVCTTTPCWLRGSD 466
C + CW+ G++
Sbjct: 79 HYCNSVSCWMLGAE 92
>UniRef50_A4J9N9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=11; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Desulfotomaculum reducens
MI-1
Length = 177
Score = 59.3 bits (137), Expect = 4e-08
Identities = 34/96 (35%), Positives = 49/96 (51%)
Frame = +2
Query: 179 PFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRM 358
P E P +K E I +GA+I +L AQ G +LP +A L +P
Sbjct: 12 PVEQEFPKEKYDELESFINSLETTKGALIEILHKAQHIFG-YLPRDVQLFIARKLGIPGA 70
Query: 359 RVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
VY V +FY+ F +P GK+ + VC T C++RG+D
Sbjct: 71 EVYGVVSFYSYFTTKPSGKHTISVCMGTACFVRGAD 106
>UniRef50_Q3A640 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=1; Pelobacter carbinolicus DSM 2380|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 159
Score = 58.4 bits (135), Expect = 7e-08
Identities = 32/94 (34%), Positives = 51/94 (54%)
Frame = +2
Query: 185 EFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRV 364
EFT V+ L+ Y H G +IPLL+ Q G +LP+S ++E ++ R+
Sbjct: 6 EFTKEQIDEVDGLIDRYG-AHPSG-LIPLLEKVQELLG-YLPLSIQEYISEKTHISPNRI 62
Query: 365 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
Y V TFY+ F ++ VQ+C T C+++G+D
Sbjct: 63 YGVVTFYSFFTMEARARHRVQLCLGTACYVKGAD 96
>UniRef50_Q1EVZ9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Clostridium oremlandii OhILAs|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Clostridium
oremlandii OhILAs
Length = 166
Score = 58.0 bits (134), Expect = 1e-07
Identities = 31/88 (35%), Positives = 51/88 (57%)
Frame = +2
Query: 200 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVAT 379
N ++A A+ GA+IP L Q G +LP A+ V+E L++P ++Y VA+
Sbjct: 15 NSTMLKAKEALQDIKGTEGALIPALHKIQSIYG-YLPEEALILVSEELDIPITQIYGVAS 73
Query: 380 FYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
FY++F P G++ + VC T C+++GS
Sbjct: 74 FYSLFSLEPKGQHVISVCLGTACYVKGS 101
>UniRef50_A0UV12 Cluster: NADH-quinone oxidoreductase, E subunit;
n=8; Bacteria|Rep: NADH-quinone oxidoreductase, E
subunit - Clostridium cellulolyticum H10
Length = 163
Score = 58.0 bits (134), Expect = 1e-07
Identities = 26/71 (36%), Positives = 42/71 (59%)
Frame = +2
Query: 251 RGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQV 430
RGA+IP+L Q G +L + +++E LN+ +Y V TFYT F P G++ + +
Sbjct: 29 RGALIPVLHEVQEVYG-YLSEDVLKEISEKLNVSLAEIYGVVTFYTQFSLNPKGRFKINI 87
Query: 431 CTTTPCWLRGS 463
C T C+++GS
Sbjct: 88 CMGTACYVKGS 98
>UniRef50_O27591 Cluster: NADP-reducing hydrogenase, subunit A; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
NADP-reducing hydrogenase, subunit A - Methanobacterium
thermoautotrophicum
Length = 149
Score = 58.0 bits (134), Expect = 1e-07
Identities = 30/75 (40%), Positives = 43/75 (57%)
Frame = +2
Query: 242 GHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYH 421
GHK +IP+L Q G +LP A+ +VA + R +Y VATFY F +P G+ H
Sbjct: 14 GHK-SEIIPILQDIQDAYG-YLPEDALEEVASFTGVSRAHLYGVATFYAQFRFKPRGRKH 71
Query: 422 VQVCTTTPCWLRGSD 466
+ VCT T C + G++
Sbjct: 72 IMVCTGTACHVSGAE 86
>UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase 24
kDa subunit, mitochondrial precursor; n=1;
Schizosaccharomyces pombe|Rep: Probable NADH-ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 162
Score = 58.0 bits (134), Expect = 1e-07
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +2
Query: 179 PFEFTAP-NQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPR 355
P F P N + +A+LA YP + A++PLLDLAQR +G W+P +AM+++A + +
Sbjct: 3 PIRFFKPENLQLAKAILARYPLRFQSAALVPLLDLAQRQHGTWIPPTAMYEIASLAGVSI 62
Query: 356 MRVYEVATFY-TMFIRRPIGKYHVQVCTTTPC 448
V+ + Y F RP K V++C + C
Sbjct: 63 DYVHSLILAYPNDFFWRP-KKPRVRICNSWMC 93
>UniRef50_Q1PYY2 Cluster: Similar to nuoE subunit of the
NADH:ubiquinone oxidoreductase; n=2; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to nuoE subunit of the
NADH:ubiquinone oxidoreductase - Candidatus Kuenenia
stuttgartiensis
Length = 162
Score = 57.2 bits (132), Expect = 2e-07
Identities = 26/68 (38%), Positives = 44/68 (64%)
Frame = +2
Query: 260 MIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTT 439
+IP+L Q G +LP++AM +V+ ++P R+Y V TFY+ F + P GK+ V++C
Sbjct: 33 LIPILQEMQEEYG-YLPLTAMEEVSVRTDIPLSRIYGVVTFYSQFSQVPRGKHTVRLCAG 91
Query: 440 TPCWLRGS 463
T C ++G+
Sbjct: 92 TACHIKGA 99
>UniRef50_Q67JG1 Cluster: Putative iron hydrogenase small subunit
gamma; n=3; Firmicutes|Rep: Putative iron hydrogenase
small subunit gamma - Symbiobacterium thermophilum
Length = 186
Score = 56.8 bits (131), Expect = 2e-07
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 197 PNQKRVEALLAIYPEGHKRGA-MIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEV 373
P+ R L A +G +I +L AQ G +LP VA L++P VY V
Sbjct: 12 PDDPRFAELDAFIQDGRSSADHLIAVLHKAQEIFG-FLPEEVQRHVAAALHVPPSEVYGV 70
Query: 374 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
TFY F P+GKY + VC T C+++G+
Sbjct: 71 VTFYNYFTLTPVGKYPINVCMGTACYVQGA 100
>UniRef50_A5FSK9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Dehalococcoides|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Dehalococcoides sp. BAV1
Length = 155
Score = 56.4 bits (130), Expect = 3e-07
Identities = 24/79 (30%), Positives = 47/79 (59%)
Frame = +2
Query: 230 IYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPI 409
I G R +++P L+ Q G++P A++ + E L++P + +Y + TFY++
Sbjct: 13 ITQSGSSRLSLLPCLEAVQE-ECGYIPHEAVNYLRECLSIPSIDIYGMITFYSLLSTNQK 71
Query: 410 GKYHVQVCTTTPCWLRGSD 466
GKY +++C + PC+L G++
Sbjct: 72 GKYVIRLCNSLPCYLNGTE 90
>UniRef50_Q9S5X7 Cluster: Fe-hydrogenase, subunit gamma; n=5;
Thermotogaceae|Rep: Fe-hydrogenase, subunit gamma -
Thermotoga maritima
Length = 164
Score = 56.0 bits (129), Expect = 4e-07
Identities = 31/86 (36%), Positives = 48/86 (55%)
Frame = +2
Query: 206 KRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFY 385
++VE +L Y G+KR +I +L Q +LP ++ V+ + +P ++Y VATFY
Sbjct: 9 EKVEEILKKY--GYKRENLIKILLEIQEIYR-YLPEDVINYVSTAMGIPPAKIYGVATFY 65
Query: 386 TMFIRRPIGKYHVQVCTTTPCWLRGS 463
F +P GKY + VC T C + GS
Sbjct: 66 AQFSLKPKGKYTIMVCDGTACHMAGS 91
>UniRef50_Q1NQY7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - delta proteobacterium
MLMS-1
Length = 200
Score = 56.0 bits (129), Expect = 4e-07
Identities = 31/91 (34%), Positives = 50/91 (54%)
Frame = +2
Query: 191 TAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYE 370
T P + VE A+ G++ G +I L Q+ + G++ AM ++A L LP +VY
Sbjct: 16 TEPRWRPVET--AMRRNGYQAGGLIEALHAVQQ-SYGYIDEEAMGRLATALTLPLSKVYG 72
Query: 371 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
V TFY F +P G++ VC T C+++G+
Sbjct: 73 VVTFYHFFHLKPKGRHSCVVCLGTACYIKGA 103
>UniRef50_A5FS13 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Dehalococcoides|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Dehalococcoides sp. BAV1
Length = 154
Score = 56.0 bits (129), Expect = 4e-07
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +2
Query: 197 PNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVA 376
P K +L++Y K+ +IP+L LA + N +L M KVA + +P VY +A
Sbjct: 4 PVNKTYTPVLSLYEA--KKENLIPIL-LAFQRNFSYLSRDMMQKVAAYVGVPESSVYNIA 60
Query: 377 TFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
TFY+ F P G + V VC T C + G++
Sbjct: 61 TFYSQFRLEPPGIHRVHVCRGTACHVMGAE 90
>UniRef50_Q7NZH7 Cluster: NADH-ubiquinone oxidoreductase, chain E;
n=8; Betaproteobacteria|Rep: NADH-ubiquinone
oxidoreductase, chain E - Chromobacterium violaceum
Length = 166
Score = 55.6 bits (128), Expect = 5e-07
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Frame = +2
Query: 212 VEALLAIYPEGHKRGAMIPLLDLA--QRXNGGWLPISA------MHKVAEILNLPRMRVY 367
++ +A YP KR A++ L +A +R G P + + VA L + + Y
Sbjct: 10 IDREVAKYPADQKRSAVMGALRIALDERRAAGETPEARCLNPELIEFVANYLGIAPVAAY 69
Query: 368 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRG 460
EVATFY M+ +P+GK+ + VCT PC L G
Sbjct: 70 EVATFYNMYDMKPVGKFKITVCTNLPCALSG 100
>UniRef50_Q1PWG7 Cluster: Similar to to proton-translocating NADH
dehydrogenase I, 24 kDa subunit; n=1; Candidatus
Kuenenia stuttgartiensis|Rep: Similar to to
proton-translocating NADH dehydrogenase I, 24 kDa
subunit - Candidatus Kuenenia stuttgartiensis
Length = 164
Score = 55.6 bits (128), Expect = 5e-07
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +2
Query: 245 HKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 424
H RG++IP+L Q G +LP + V+E LN+ + VATFY F RP G++ +
Sbjct: 28 HGRGSLIPILQTIQTAYG-YLPEKVVDFVSERLNISVNEIIGVATFYAQFHMRPRGRHII 86
Query: 425 QVCTTTPCWLRGS 463
+ C+ T C ++G+
Sbjct: 87 KACSGTACHVKGA 99
>UniRef50_A1HP41 Cluster: NADH-quinone oxidoreductase, E subunit;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase, E
subunit - Thermosinus carboxydivorans Nor1
Length = 166
Score = 55.6 bits (128), Expect = 5e-07
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +2
Query: 209 RVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYT 388
+++ +LA Y +G K GA+IP+L AQ G +L + +AE L++P ++Y V TFY
Sbjct: 21 QLDEILAKY-QGVK-GALIPVLQEAQNAYG-YLSKEVIEYIAEKLDIPVSQIYGVVTFYA 77
Query: 389 MFIRRPIGKYHVQVCTTTPCWLRGS 463
F P G+ ++VC T C +RG+
Sbjct: 78 QFHLNPRGRNIIRVCQGTACHVRGA 102
>UniRef50_Q8YYU5 Cluster: NADH dehydrogenase I chain E; n=4;
Bacteria|Rep: NADH dehydrogenase I chain E - Anabaena
sp. (strain PCC 7120)
Length = 164
Score = 54.8 bits (126), Expect = 9e-07
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +2
Query: 206 KRVEAL-LAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATF 382
KR++ L AI +++ A+I +L AQ G +L + +A L LP RVY VATF
Sbjct: 15 KRLKMLDAAIKRHQYQQDALIEILHKAQELFG-YLENDLLLYIAHSLKLPPSRVYGVATF 73
Query: 383 YTMFIRRPIGKYHVQVCTTTPCWLRGS 463
Y +F P G + VCT T C+++GS
Sbjct: 74 YHLFSLAPQGVHSCVVCTGTACYVKGS 100
>UniRef50_Q1PW48 Cluster: Similar to NADH:ubiquinone oxidoreductase
24 kDa subunit, mitochondrial; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to NADH:ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial -
Candidatus Kuenenia stuttgartiensis
Length = 152
Score = 54.4 bits (125), Expect = 1e-06
Identities = 30/89 (33%), Positives = 48/89 (53%)
Frame = +2
Query: 200 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVAT 379
+Q V+ L I G+ + A IP+L Q G +LP+ + +V E + + +Y VAT
Sbjct: 2 SQSNVKKYLEIC--GNTKEASIPILQSIQEEYG-YLPLDVLDQVCEESEITKSHLYGVAT 58
Query: 380 FYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
FY F P G+ ++VC T C ++G+D
Sbjct: 59 FYAQFKLTPKGRNAIKVCKGTACHVKGAD 87
>UniRef50_A5D2H5 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=1; Pelotomaculum thermopropionicum SI|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit -
Pelotomaculum thermopropionicum SI
Length = 192
Score = 54.4 bits (125), Expect = 1e-06
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = +2
Query: 251 RGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQV 430
+G +I +L AQ G +LP +AE L +P V V TFY++F RP GKY + V
Sbjct: 49 KGQLIRILQKAQDIFG-YLPDDVQAFIAERLRVPVAEVNGVVTFYSLFSTRPKGKYIINV 107
Query: 431 CTTTPCWLRGS 463
C T C+++G+
Sbjct: 108 CMGTACYVKGA 118
>UniRef50_Q9RU91 Cluster: NADH dehydrogenase I, E subunit; n=2;
Deinococcus|Rep: NADH dehydrogenase I, E subunit -
Deinococcus radiodurans
Length = 207
Score = 54.0 bits (124), Expect = 2e-06
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = +2
Query: 236 PEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGK 415
P+G +R A++PLL Q G ++ + ++AE+ V V +FY+ + P G+
Sbjct: 22 PQG-RRSALMPLLREVQDAEG-FVAAPRLAEIAELCGTTATEVRSVMSFYSTYHTVPTGR 79
Query: 416 YHVQVCTTTPCWLRGSD 466
YH+QVC+T C L GSD
Sbjct: 80 YHLQVCSTLMCALAGSD 96
>UniRef50_Q8RBD2 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=3; Thermoanaerobacter|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit - Thermoanaerobacter
tengcongensis
Length = 169
Score = 54.0 bits (124), Expect = 2e-06
Identities = 22/70 (31%), Positives = 44/70 (62%)
Frame = +2
Query: 254 GAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 433
G++I +++ AQ G +LPI +++ + +P ++ ++TFY+ F +P GKY + +C
Sbjct: 37 GSLIAVMNDAQEIFG-YLPIEVQLFISQEMKVPLTEIFGISTFYSRFTLKPSGKYKINLC 95
Query: 434 TTTPCWLRGS 463
T C++RG+
Sbjct: 96 MGTACYVRGA 105
>UniRef50_Q6FE68 Cluster: NADH dehydrogenase I chain E; n=5;
Moraxellaceae|Rep: NADH dehydrogenase I chain E -
Acinetobacter sp. (strain ADP1)
Length = 170
Score = 54.0 bits (124), Expect = 2e-06
Identities = 28/92 (30%), Positives = 51/92 (55%)
Frame = +2
Query: 191 TAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYE 370
TA +E + YP + R A + L QR NG W+ + M+ +A++L++ +
Sbjct: 19 TADEIHEIEHHIHHYP--YPRAASLDALKCVQRRNG-WVDDAQMNAIAQMLSISVADLEG 75
Query: 371 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
VATFY R+P+G++ + +C + C+L G++
Sbjct: 76 VATFYNRIYRQPVGRHVILLCDSIACFLMGAE 107
>UniRef50_Q0AWA4 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit NuoE precursor; n=1; Syntrophomonas wolfei
subsp. wolfei str. Goettingen|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit NuoE precursor -
Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
Length = 166
Score = 53.6 bits (123), Expect = 2e-06
Identities = 22/55 (40%), Positives = 37/55 (67%)
Frame = +2
Query: 302 WLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
+LP SA+ AE + +P +VY +ATFY F +P G+++++VC T C ++GS+
Sbjct: 40 YLPRSALELTAEYVGVPFSQVYSMATFYRAFSLQPRGRFNIKVCDGTTCHIKGSN 94
>UniRef50_Q89AU3 Cluster: NADH-quinone oxidoreductase subunit E;
n=1; Buchnera aphidicola (Baizongia pistaciae)|Rep:
NADH-quinone oxidoreductase subunit E - Buchnera
aphidicola subsp. Baizongia pistaciae
Length = 171
Score = 53.6 bits (123), Expect = 2e-06
Identities = 27/102 (26%), Positives = 54/102 (52%)
Frame = +2
Query: 161 EDNPSIPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEI 340
E + I +F Q+++E I R ++I +L Q+ + GW+ + ++A I
Sbjct: 8 EMSKKIDIKFKLTIQEKIEIFNIIKNYRTVRSSLIEILKFVQK-SYGWISNELITELACI 66
Query: 341 LNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
L + + + E+ATFY+ R+PIG+ ++ C + C++ G +
Sbjct: 67 LKISKCDIEEIATFYSQIFRQPIGRNIIKYCDSVVCYVNGCE 108
>UniRef50_Q1IS36 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Acidobacteria bacterium Ellin345|Rep: NADH-quinone
oxidoreductase, E subunit - Acidobacteria bacterium
(strain Ellin345)
Length = 160
Score = 53.2 bits (122), Expect = 3e-06
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Frame = +2
Query: 239 EGH---KRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPI 409
+GH KR ++P L L + G+L A+ ++A + L + V V ++Y+M +PI
Sbjct: 15 QGHYPTKRSPLVPFL-LYVQDEVGYLSDEAIVEIANRVELTPLEVRNVISYYSMLRTKPI 73
Query: 410 GKYHVQVCTTTPCWLRGSD 466
GKY+VQVCT C RG +
Sbjct: 74 GKYNVQVCTNICCLQRGGE 92
>UniRef50_Q01WJ0 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Solibacter usitatus
(strain Ellin6076)
Length = 170
Score = 52.8 bits (121), Expect = 4e-06
Identities = 27/74 (36%), Positives = 41/74 (55%)
Frame = +2
Query: 242 GHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYH 421
G + A+I L Q G +L + + VA +L +P RVY ATFY F +P G++
Sbjct: 28 GREPHALIETLHTVQECFG-YLDEAGLRFVASVLRVPLSRVYGAATFYHFFTLKPKGRHT 86
Query: 422 VQVCTTTPCWLRGS 463
VCT T C+++G+
Sbjct: 87 CVVCTGTACYIKGA 100
>UniRef50_A0UVM6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Clostridium cellulolyticum H10|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Clostridium
cellulolyticum H10
Length = 163
Score = 52.8 bits (121), Expect = 4e-06
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +2
Query: 269 LLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPC 448
+L+L LP + VAE L++P +VY V TFY+MF P G+Y V+VC + PC
Sbjct: 29 MLELQSMSGTNSLPHEWVVFVAEALDMPVSKVYSVITFYSMFGTEPRGRYLVEVCKSGPC 88
Query: 449 WLRGS 463
+ G+
Sbjct: 89 HVSGA 93
>UniRef50_Q2FP98 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Methanospirillum hungatei JF-1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 160
Score = 52.8 bits (121), Expect = 4e-06
Identities = 25/89 (28%), Positives = 52/89 (58%)
Frame = +2
Query: 200 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVAT 379
++KR++ ++ YP + G + +L Q +P+ + V+E L+LP ++ + T
Sbjct: 2 DEKRLDEIIEKYP--YPAGRTLGVLREIQ-IQERHIPMDTLKLVSEKLDLPLSELFALVT 58
Query: 380 FYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
FY+ F +P+G++ + VC TPC ++G++
Sbjct: 59 FYSFFSLKPVGEHLITVCMGTPCHVKGAE 87
>UniRef50_A5V6C3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Sphingomonadaceae|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Sphingomonas wittichii
RW1
Length = 159
Score = 52.4 bits (120), Expect = 5e-06
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Frame = +2
Query: 191 TAPNQKRVEALLA--IYPEGHKRGAMIPLL-DLAQRXNGGWLPISAMHKVAEILNLPRMR 361
T ++ VEA++A + +G +RGA++PLL DL + G++ + VA +NL R
Sbjct: 2 TMERREPVEAMVARLLAAQGERRGALLPLLHDLQEEL--GFVGEETVAAVAAAMNLSRAE 59
Query: 362 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRG 460
V+ V +FY F + P G++ V+ C C RG
Sbjct: 60 VHGVVSFYHDFRKAPAGRHVVKYCRAESCRSRG 92
>UniRef50_Q3A461 Cluster: NADP-reducing hydrogenase chain A; n=5;
Deltaproteobacteria|Rep: NADP-reducing hydrogenase chain
A - Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 173
Score = 52.0 bits (119), Expect = 6e-06
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +2
Query: 248 KRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 427
K G ++ +L AQ G +LP VA+ + + +VY V +FYT F P GK+ +
Sbjct: 39 KEGHLVTVLHKAQSLFG-YLPKEVQEFVADHMEVSLAQVYGVVSFYTFFTMIPKGKHPIS 97
Query: 428 VCTTTPCWLRGSD 466
VC T C+++G+D
Sbjct: 98 VCMGTACFVKGAD 110
>UniRef50_A0LJN9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Deltaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 163
Score = 52.0 bits (119), Expect = 6e-06
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +2
Query: 299 GWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRG 460
G++ AM + A IL + + + E+ATFY R P+G+Y + VC + CW+ G
Sbjct: 36 GYMTDEAMEEAAGILGMTTLELEELATFYDHIYRSPVGRYVIHVCDSAVCWMEG 89
>UniRef50_Q2RHR8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Moorella thermoacetica ATCC 39073|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Moorella thermoacetica (strain ATCC 39073)
Length = 157
Score = 51.6 bits (118), Expect = 8e-06
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +2
Query: 257 AMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCT 436
A+I +L +Q G +LP + +A+ L L +VY V +FY F +P GKY V VC
Sbjct: 26 ALIEVLHQSQELVG-YLPRNVQVAIADGLGLSLSQVYSVVSFYNHFTTKPKGKYQVSVCM 84
Query: 437 TTPCWLRGS 463
T C+++G+
Sbjct: 85 GTACFVKGA 93
>UniRef50_Q2AG84 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Halothermothrix orenii H
168
Length = 167
Score = 51.6 bits (118), Expect = 8e-06
Identities = 28/78 (35%), Positives = 40/78 (51%)
Frame = +2
Query: 230 IYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPI 409
I G + +IP+L Q+ +LP + +A +++L VY VATFY F P
Sbjct: 18 IEKHGKDQSKLIPILQEVQKEYR-YLPEEILTYIATVMDLSPATVYGVATFYAQFSLDPK 76
Query: 410 GKYHVQVCTTTPCWLRGS 463
GKY + VC T C + GS
Sbjct: 77 GKYVINVCDGTACHVSGS 94
>UniRef50_Q4AMU5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Chlorobium phaeobacteroides BS1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Chlorobium
phaeobacteroides BS1
Length = 195
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Frame = +2
Query: 242 GHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYH 421
G A +PLL Q G +LP AM + ++ ++Y VATFY+ F P+G++
Sbjct: 23 GKSVSAAVPLLQAVQNEYG-YLPREAMDIIVAETDVGASQLYGVATFYSQFRLDPVGRHV 81
Query: 422 VQVCTTTPCWLRGSD 466
++VC T C + G+D
Sbjct: 82 IKVCHGTACHVSGAD 96
>UniRef50_Q0PIE2 Cluster: NAD(P)H-quinone oxidoreductase 24 kDa
subunit; n=1; Heliobacillus mobilis|Rep: NAD(P)H-quinone
oxidoreductase 24 kDa subunit - Heliobacillus mobilis
Length = 171
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/81 (32%), Positives = 45/81 (55%)
Frame = +2
Query: 221 LLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIR 400
+L YP+ +R + L D+ + ++P +M +A+ L LP ++Y +ATFY
Sbjct: 15 ILEGYPK-EQRYTLAMLQDIQKEFQ--FIPRESMELIADYLELPLSKIYSLATFYKALSL 71
Query: 401 RPIGKYHVQVCTTTPCWLRGS 463
RP GK+ +++C T C +R S
Sbjct: 72 RPKGKHVIKICDGTACHIRSS 92
>UniRef50_A0LLS9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Syntrophobacter fumaroxidans MPOB|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 151
Score = 50.8 bits (116), Expect = 1e-05
Identities = 28/71 (39%), Positives = 37/71 (52%)
Frame = +2
Query: 248 KRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 427
KR A+IP+L Q G+LP AM A + VY V+TFY F P+G++ V
Sbjct: 15 KRDALIPVLQDIQ-GEFGYLPPHAMQAAARHCRTSAVEVYGVSTFYAQFKFSPVGRHTVT 73
Query: 428 VCTTTPCWLRG 460
VC T C + G
Sbjct: 74 VCQGTACHVMG 84
>UniRef50_A7IL17 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=3; Alphaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Xanthobacter
sp. (strain Py2)
Length = 176
Score = 50.4 bits (115), Expect = 2e-05
Identities = 27/68 (39%), Positives = 37/68 (54%)
Frame = +2
Query: 245 HKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 424
H GA +P+L Q G++P A+ +AE LNL R VY V TFY F R G++ V
Sbjct: 33 HLEGATMPILHALQE-TFGFVPDPAVPMIAESLNLSRAEVYGVLTFYHDFRREAPGRHVV 91
Query: 425 QVCTTTPC 448
++C C
Sbjct: 92 KLCAAEAC 99
>UniRef50_A5UZ48 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=10; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Roseiflexus sp. RS-1
Length = 178
Score = 50.4 bits (115), Expect = 2e-05
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = +2
Query: 245 HKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 424
++ A+I +L AQ G +L + +A L+LP RVY VATFY F P G++
Sbjct: 35 YRPDALIEVLHRAQELFG-YLSTDLLLFIANSLHLPPSRVYGVATFYHFFSLAPKGEHSC 93
Query: 425 QVCTTTPCWLRGS 463
VC T C++RG+
Sbjct: 94 VVCLGTACYVRGA 106
>UniRef50_A1ALP3 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Pelobacter propionicus DSM 2379|Rep: NADH-quinone
oxidoreductase, E subunit - Pelobacter propionicus
(strain DSM 2379)
Length = 154
Score = 50.4 bits (115), Expect = 2e-05
Identities = 27/88 (30%), Positives = 44/88 (50%)
Frame = +2
Query: 203 QKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATF 382
+++ L A YP+ ++P L + A+ +A L LP M+V E T+
Sbjct: 5 EEKFAQLRATYPKELNSSLVMPFLRIMLDEKKSLGESDAVF-IANYLGLPAMQVKEALTW 63
Query: 383 YTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
YTMF R P+G + ++VC C L G++
Sbjct: 64 YTMFYRHPVGTHVIKVCRNIACSLMGAE 91
>UniRef50_Q4AHT8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Chlorobium phaeobacteroides BS1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Chlorobium
phaeobacteroides BS1
Length = 172
Score = 50.0 bits (114), Expect = 3e-05
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +2
Query: 248 KRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 427
K+G +IP+L Q G ++P A K+ E + L +Y VATFY F P+GK+ ++
Sbjct: 33 KKGNLIPVLQGVQSIFG-YVPREAFIKLNEEMGLQLSDMYGVATFYAQFRLNPVGKHIIK 91
Query: 428 VCTTTPCWLRGS 463
VC T C ++ +
Sbjct: 92 VCHGTACHVQSA 103
>UniRef50_O66842 Cluster: NADH-quinone oxidoreductase subunit E;
n=2; Aquifex aeolicus|Rep: NADH-quinone oxidoreductase
subunit E - Aquifex aeolicus
Length = 160
Score = 50.0 bits (114), Expect = 3e-05
Identities = 29/95 (30%), Positives = 50/95 (52%)
Frame = +2
Query: 182 FEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMR 361
FEF + +++ + +P+ KR A++ L Q G ++P ++ +A++L LP
Sbjct: 6 FEFPEELKTKLQEHINYFPK--KRQAILLCLHEIQNYYG-YIPPESLKPLADMLELPLNH 62
Query: 362 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
V V FY MF R KY ++VC + C L G++
Sbjct: 63 VEGVVAFYDMFDREDKAKYRIRVCVSIVCHLMGTN 97
>UniRef50_Q749M0 Cluster: NAD-reducing hydrogenase, putative; n=4;
Bacteria|Rep: NAD-reducing hydrogenase, putative -
Geobacter sulfurreducens
Length = 191
Score = 49.2 bits (112), Expect = 4e-05
Identities = 33/89 (37%), Positives = 45/89 (50%)
Frame = +2
Query: 197 PNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVA 376
P K VE L Y ++ A++ +L +AQ G L M VA L +P RVY VA
Sbjct: 20 PRFKVVERTLKQYQ--YRADALLEVLHVAQE-TFGCLSDELMTHVARQLRVPPSRVYGVA 76
Query: 377 TFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
TFY F G++ VCT T C+++ S
Sbjct: 77 TFYHFFTLEARGEHSCVVCTGTACYVKRS 105
>UniRef50_Q2C5T5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Vibrionaceae|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Photobacterium sp. SKA34
Length = 188
Score = 49.2 bits (112), Expect = 4e-05
Identities = 29/91 (31%), Positives = 50/91 (54%)
Frame = +2
Query: 191 TAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYE 370
T + +E +A YPE KR I L Q G++ +++ V+E+ +L ++ E
Sbjct: 3 TDQERAHLEEHIAHYPE--KRAGAIYCLYFMQ-DKYGYITKPSLNLVSELTDLSTTQLDE 59
Query: 371 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
+ TFYT+ RRP+G+ ++VC + C RG+
Sbjct: 60 LITFYTLLRRRPVGRNIMRVCDSISCHTRGA 90
>UniRef50_Q98BW7 Cluster: NAD-dependent formate dehydrogenase gamma
subunit; n=15; Proteobacteria|Rep: NAD-dependent formate
dehydrogenase gamma subunit - Rhizobium loti
(Mesorhizobium loti)
Length = 159
Score = 48.8 bits (111), Expect = 6e-05
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = +2
Query: 254 GAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 433
G ++P+L Q G +P +A+ +A+ LNL R V+ V TFY F RP G++ +++C
Sbjct: 26 GPLLPILHEIQ-DEFGHVPQAALPVIADGLNLSRAEVHGVVTFYHDFRARPAGRHVLKLC 84
Query: 434 TTTPCWLRGSD 466
C GSD
Sbjct: 85 QAEACQSMGSD 95
>UniRef50_Q835I9 Cluster: NAD-dependent formate dehydrogenase, gamma
subunit, putative; n=1; Enterococcus faecalis|Rep:
NAD-dependent formate dehydrogenase, gamma subunit,
putative - Enterococcus faecalis (Streptococcus
faecalis)
Length = 162
Score = 48.4 bits (110), Expect = 8e-05
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 269 LLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPC 448
L++L G++ VAE L+L RVYE+ +FY + P KY +++C +TPC
Sbjct: 27 LIELQFASEEGYIDQETAQLVAEHLHLTEARVYEIVSFYAILKTEPQAKYVLKICNSTPC 86
Query: 449 WLRG 460
G
Sbjct: 87 HYTG 90
>UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=2;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 638
Score = 48.4 bits (110), Expect = 8e-05
Identities = 25/68 (36%), Positives = 35/68 (51%)
Frame = +2
Query: 260 MIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTT 439
M L DL L ++ VAE +NLP+ V FYTMF RP K+ ++VC +
Sbjct: 52 MAILRDLENLSGNQQLSPETLNAVAEAMNLPQSTVAGFVGFYTMFSTRPRAKFLIRVCKS 111
Query: 440 TPCWLRGS 463
PC + G+
Sbjct: 112 GPCHVMGA 119
>UniRef50_Q6SGN4 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; uncultured bacterium 463|Rep: NADH-quinone
oxidoreductase, E subunit - uncultured bacterium 463
Length = 167
Score = 48.4 bits (110), Expect = 8e-05
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +2
Query: 191 TAPNQKRVEALLAIYPEGHKRGAM-IPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVY 367
+A +Q+ ++A+ A R A+ I L + Q G W+ ++ +A L++ +
Sbjct: 11 SALSQEELQAIDAEIAHVPYRDAVAIDALKIVQAHRG-WVSDESLSAIAAHLHMSADELD 69
Query: 368 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
+ATFY + RRP+G + +C + CW++G D
Sbjct: 70 GIATFYNLIYRRPVGDKVILLCNSISCWIKGCD 102
>UniRef50_Q89QJ0 Cluster: NADH dehydrogenase I chain E; n=16;
Alphaproteobacteria|Rep: NADH dehydrogenase I chain E -
Bradyrhizobium japonicum
Length = 162
Score = 47.6 bits (108), Expect = 1e-04
Identities = 26/79 (32%), Positives = 41/79 (51%)
Frame = +2
Query: 230 IYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPI 409
I + GA + +L Q G ++P +A+ VA+ LNL R V+ V TFY F +P
Sbjct: 21 IAEHARQEGATLVILHALQAAFG-YVPEAAIPMVAQALNLSRAEVHGVFTFYHDFRHKPA 79
Query: 410 GKYHVQVCTTTPCWLRGSD 466
G++ +++C C G D
Sbjct: 80 GRHVLKLCRAEACQAAGGD 98
>UniRef50_A3JB74 Cluster: ATP synthase subunit E; n=1; Marinobacter
sp. ELB17|Rep: ATP synthase subunit E - Marinobacter sp.
ELB17
Length = 178
Score = 47.6 bits (108), Expect = 1e-04
Identities = 25/72 (34%), Positives = 38/72 (52%)
Frame = +2
Query: 245 HKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 424
HK GA++P+L Q G++P A+ +AE+L R ++ V +FY F P G +
Sbjct: 36 HKPGALLPILHAIQ-DRVGYVPEDAVPIIAEMLQQTRADIHGVISFYHHFRTHPSGSNLL 94
Query: 425 QVCTTTPCWLRG 460
+VC C RG
Sbjct: 95 EVCRAEACQARG 106
>UniRef50_A0QNT7 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Mycobacterium smegmatis str. MC2 155|Rep: Formate
dehydrogenase, gamma subunit - Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155)
Length = 161
Score = 47.6 bits (108), Expect = 1e-04
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +2
Query: 191 TAPNQKRVEALLAIYPEGHK--RGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRV 364
T + V L+ H+ RG ++P+L Q G +P A+ +AE LNL R V
Sbjct: 4 TTTGETSVATLVREIAADHRDHRGPLLPILHAVQERLG-CVPAEAVPVLAEELNLSRADV 62
Query: 365 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
+ V TFY F P G+ V+VC C G+
Sbjct: 63 HGVITFYHDFRSEPAGRTTVRVCRAEACQALGA 95
>UniRef50_Q6N1Z1 Cluster: NADH-ubiquinone dehydrogenase chain E;
n=8; Alphaproteobacteria|Rep: NADH-ubiquinone
dehydrogenase chain E - Rhodopseudomonas palustris
Length = 162
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +2
Query: 242 GHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYH 421
G + AM+ L L Q G W+ + + + A++L + + +ATFY+ R P+G
Sbjct: 19 GGAKAAMVEALKLVQEAEG-WVSDAHLKEAADVLGVTPAEIDALATFYSQIFRSPVGDTV 77
Query: 422 VQVCTTTPCWLRGSD 466
+ +C C+L G D
Sbjct: 78 ILLCDGLSCYLCGGD 92
>UniRef50_A0LGJ1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 162
Score = 47.2 bits (107), Expect = 2e-04
Identities = 27/78 (34%), Positives = 41/78 (52%)
Frame = +2
Query: 230 IYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPI 409
I P + ++I +L AQ G +LP +VAE L L +Y V TFY F P
Sbjct: 21 IEPYRGQPNSLIQVLAKAQEYIG-YLPKWVQVQVAEGLGLSLQEIYGVTTFYAFFSLIPR 79
Query: 410 GKYHVQVCTTTPCWLRGS 463
G++ + VC T C+++G+
Sbjct: 80 GRHKLSVCAGTACYVKGT 97
>UniRef50_Q74GA4 Cluster: NADH dehydrogenase I, E subunit; n=6;
Geobacter|Rep: NADH dehydrogenase I, E subunit -
Geobacter sulfurreducens
Length = 173
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/70 (32%), Positives = 41/70 (58%)
Frame = +2
Query: 254 GAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 433
G ++P+L Q G++P + VAE LN+ +++ V TFY F +P G++ ++VC
Sbjct: 36 GNLMPVLQGIQ-DEYGYVPRPTIDLVAERLNVYPSQIFGVLTFYAQFHLKPRGRFIIRVC 94
Query: 434 TTTPCWLRGS 463
T C ++G+
Sbjct: 95 VGTACHVQGA 104
>UniRef50_Q0AVX7 Cluster: Fe-hydrogenase, gamma subunit; n=4;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
Fe-hydrogenase, gamma subunit - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 148
Score = 46.4 bits (105), Expect = 3e-04
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 302 WLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
++P A+ A++ ++P + Y VATFY+ P GK +++C + PC + G+D
Sbjct: 31 YIPEDAVVYAAQVFDIPEAKAYGVATFYSYLKVGPRGKNVIRICESAPCHIAGAD 85
>UniRef50_A6PPY8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Victivallis vadensis ATCC BAA-548|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Victivallis vadensis ATCC BAA-548
Length = 170
Score = 46.0 bits (104), Expect = 4e-04
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +2
Query: 245 HKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 424
+ +IP+L Q +L + VA + +P RVY VATFY F +P GKY +
Sbjct: 27 YSESKLIPILQEVQAVYK-YLSKDMISYVATSIGVPPSRVYGVATFYAHFSMQPKGKYII 85
Query: 425 QVCTTTPCWLRGS 463
++C T C ++ S
Sbjct: 86 KLCDGTACHVKKS 98
>UniRef50_A3YBB2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Marinomonas sp. MED121|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Marinomonas
sp. MED121
Length = 189
Score = 46.0 bits (104), Expect = 4e-04
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +2
Query: 254 GAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 433
G ++P+L Q G ++P S++ + + LN+ R V+ V TFY F +P G++ ++VC
Sbjct: 43 GPLLPILHEVQHQLG-YVPDSSLPIIGKALNISRAEVHGVVTFYHHFSSKPRGRHIIEVC 101
Query: 434 TTTPCWLRG 460
C G
Sbjct: 102 RAESCQSMG 110
>UniRef50_Q47WZ1 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Colwellia psychrerythraea 34H|Rep: Formate
dehydrogenase, gamma subunit - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 163
Score = 45.6 bits (103), Expect = 5e-04
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 191 TAPNQKRVEALLAIYPEGHKR--GAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRV 364
TA N K ++ + I E H+ GAM+P+L Q + ++P +A+ +A+ LN+ + V
Sbjct: 2 TATNDKGLQQIATII-EQHQTLPGAMLPILHAIQN-DLSFIPSNALPLIAKALNVSKAEV 59
Query: 365 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
+ V +FY F G + +++C C GS
Sbjct: 60 HGVISFYHHFRTEEPGAHVIEICRGESCQAMGS 92
>UniRef50_A4M6K3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Petrotoga mobilis SJ95
Length = 154
Score = 45.6 bits (103), Expect = 5e-04
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +2
Query: 299 GWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
G++ + ++A+ ++P+ R+Y V +FY+MF P GKY V+VC + C L S
Sbjct: 36 GFISEEDILRIAQKRDIPKARLYGVISFYSMFHLEPTGKYIVRVCDSVSCRLNES 90
>UniRef50_A3ETZ6 Cluster: NADH ubiquinone oxidoreductase; n=1;
Leptospirillum sp. Group II UBA|Rep: NADH ubiquinone
oxidoreductase - Leptospirillum sp. Group II UBA
Length = 627
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/68 (30%), Positives = 36/68 (52%)
Frame = +2
Query: 257 AMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCT 436
A++PLL ++ + + +++++ L + + TFY F+ P GK V+VC
Sbjct: 29 AVLPLLHYYMEKKN-YISEADVSRISQLTGLSVSDILGIGTFYQHFVFHPTGKNSVRVCL 87
Query: 437 TTPCWLRG 460
TTPC RG
Sbjct: 88 TTPCLFRG 95
>UniRef50_A1AP34 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit precursor - Pelobacter
propionicus (strain DSM 2379)
Length = 169
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +2
Query: 302 WLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
+LP+ + V E L++P +V+ V +FY F P GKY +++C T C + S
Sbjct: 45 YLPMEVLSHVIEELDIPATKVFGVVSFYAHFTLEPRGKYVIRLCDGTACHAKRS 98
>UniRef50_A0J5R7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Shewanella woodyi ATCC 51908|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Shewanella
woodyi ATCC 51908
Length = 179
Score = 44.8 bits (101), Expect = 0.001
Identities = 25/92 (27%), Positives = 46/92 (50%)
Frame = +2
Query: 191 TAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYE 370
++ Q+ ++ L++ P+ G I L L Q G W+ +++H ++ +P +
Sbjct: 22 SSKEQQGIDELISHSPQ--LAGITIDALKLIQAERG-WVSDASLHALSLYTQIPVADLDS 78
Query: 371 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
VATFY + R+P+GK + C C L G +
Sbjct: 79 VATFYNLIFRQPVGKVVLHPCDGISCDLMGGE 110
>UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreductase;
n=2; Streptomyces|Rep: Putative respiratory chain
oxidoreductase - Streptomyces coelicolor
Length = 646
Score = 44.0 bits (99), Expect = 0.002
Identities = 25/72 (34%), Positives = 33/72 (45%)
Frame = +2
Query: 248 KRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 427
+R ++P L A GW+ A+ V L +P Y VATFY MF RP +
Sbjct: 34 RRDQLLPALH-ALNDRVGWISEGALDYVCRRLTVPPAEAYGVATFYAMFSVRPRPATVLH 92
Query: 428 VCTTTPCWLRGS 463
VCT C G+
Sbjct: 93 VCTDLACTAAGA 104
>UniRef50_Q2S5I9 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit, putative; n=2; Sphingobacteriales genera
incertae sedis|Rep: NADH-ubiquinone oxidoreductase 24
kDa subunit, putative - Salinibacter ruber (strain DSM
13855)
Length = 249
Score = 44.0 bits (99), Expect = 0.002
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Frame = +2
Query: 152 DTPEDNPSIPFE-----FTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPIS 316
+ P+ +P F +T + ++EA YPE + A++ +L LAQ G+L
Sbjct: 36 ELPDQDPDPAFSDDELVWTDEEEAQIEAWKDQYPED--QAAIMKVLWLAQE-KFGYLAPE 92
Query: 317 AMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRG 460
+ A+ L++ + Y VATFY + + G Y + VCT C + G
Sbjct: 93 VIQLCADTLDMTFTQAYGVATFYHQYFKEEKGTYVLDVCTCFTCQVCG 140
>UniRef50_Q608U6 Cluster: Formate dehydrogenase, gamma subunit; n=3;
Proteobacteria|Rep: Formate dehydrogenase, gamma subunit
- Methylococcus capsulatus
Length = 159
Score = 43.6 bits (98), Expect = 0.002
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +2
Query: 254 GAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 433
GA++P+L Q G++P A+ ++A+ LNL R V+ V +FY F GK+ + +C
Sbjct: 23 GALLPILHGIQ-DRIGFIPEDAVPQIAKALNLSRAEVHGVISFYHYFRTTAPGKHTIHLC 81
Query: 434 TTTPCWLRGSD 466
C S+
Sbjct: 82 RAESCQAMNSE 92
>UniRef50_A1FMP2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Pseudomonas|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Pseudomonas putida W619
Length = 160
Score = 43.6 bits (98), Expect = 0.002
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +2
Query: 254 GAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 433
GA++P+L Q + G++P +A+ +A LNL V V +FY F P ++ +++C
Sbjct: 23 GALLPILHAVQE-SIGFIPDAAVADIAHALNLSLAEVRGVISFYHDFRTAPPARHTLRLC 81
Query: 434 TTTPCWLRGSD 466
C RGS+
Sbjct: 82 RAESCQSRGSE 92
>UniRef50_A3DCI7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Clostridium|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237)
Length = 165
Score = 43.2 bits (97), Expect = 0.003
Identities = 24/74 (32%), Positives = 37/74 (50%)
Frame = +2
Query: 242 GHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYH 421
G A+I +L Q ++P +++ L + R++ VATFY F P GKY
Sbjct: 22 GTSETAIIAILQSIQEEYH-YIPKEVFPYLSKKLKVSEARIFSVATFYENFSLEPKGKYI 80
Query: 422 VQVCTTTPCWLRGS 463
++VC T C +R S
Sbjct: 81 IKVCDGTACHVRKS 94
>UniRef50_Q057X2 Cluster: NADH dehydrogenase I chain E; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep: NADH
dehydrogenase I chain E - Buchnera aphidicola subsp.
Cinara cedri
Length = 156
Score = 42.3 bits (95), Expect = 0.005
Identities = 18/70 (25%), Positives = 38/70 (54%)
Frame = +2
Query: 245 HKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 424
+ + A I L + Q W+ ++ +++IL++P V +ATFY R+P+G+ +
Sbjct: 21 NSQAACIEALKIVQEHRK-WICKDSIIAISKILSIPACEVESIATFYCHIFRKPVGRNII 79
Query: 425 QVCTTTPCWL 454
+ C + C++
Sbjct: 80 RYCDSVVCFI 89
>UniRef50_A6PMG8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor; n=1; Victivallis vadensis ATCC
BAA-548|Rep: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor - Victivallis vadensis ATCC BAA-548
Length = 150
Score = 42.3 bits (95), Expect = 0.005
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 299 GWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 463
G++ ++ ++E +P + V V +FY F R GKY + +C T C ++GS
Sbjct: 30 GYVSDESIRAISEYFGIPEVEVEGVLSFYAQFKRVKPGKYKIAICDGTACHIKGS 84
>UniRef50_A0RMD2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit; n=1; Campylobacter fetus subsp. fetus
82-40|Rep: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 163
Score = 42.3 bits (95), Expect = 0.005
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +2
Query: 251 RGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQV 430
R ++P L + QR G ++ + + + L + M E FY+MF ++ GK+ ++
Sbjct: 24 RALVLPSLWMVQRAQG-FIDAKDVLYLEKTLGIRSMFYAEAIGFYSMFNQKSKGKFELKF 82
Query: 431 CTTTPCWLRGSD 466
C T C LRGSD
Sbjct: 83 CKTITCKLRGSD 94
>UniRef50_UPI0000E87F9D Cluster: ATP synthase subunit E; n=1;
Methylophilales bacterium HTCC2181|Rep: ATP synthase
subunit E - Methylophilales bacterium HTCC2181
Length = 157
Score = 41.5 bits (93), Expect = 0.009
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +2
Query: 248 KRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 427
K GA++PL+ Q + G++P + ++ NL ++ TFY F P GK +Q
Sbjct: 21 KPGALLPLMHAIQ-DSLGYIPEDSYPIISSAYNLSIAEIHGFVTFYHHFRTSPSGKNILQ 79
Query: 428 VCTTTPCWLRGSD 466
VC C GS+
Sbjct: 80 VCRAESCQSMGSE 92
>UniRef50_Q28P85 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=1; Jannaschia sp. CCS1|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Jannaschia
sp. (strain CCS1)
Length = 167
Score = 41.5 bits (93), Expect = 0.009
Identities = 25/90 (27%), Positives = 42/90 (46%)
Frame = +2
Query: 197 PNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVA 376
P+ VE I G ++P+L Q G ++P A +A LN+ ++ V
Sbjct: 10 PDDLLVEVDAIIQKNIALEGPLLPILHDVQAAFG-YVPDDARALIATALNITEAELHGVI 68
Query: 377 TFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
+FY F R+P GK +++C C G++
Sbjct: 69 SFYHDFRRKPAGKRVLKICRAEACQAMGAN 98
>UniRef50_A6VXL9 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=3; Gammaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Marinomonas
sp. MWYL1
Length = 165
Score = 41.5 bits (93), Expect = 0.009
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +2
Query: 248 KRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQ 427
K GA++PLL Q ++P A+ +A L L R V+ V +FY F + G++ V+
Sbjct: 24 KPGALLPLLHAIQ-DRFSYIPEDAVALIAGALKLSRAEVHGVISFYHHFRTKQPGRHVVE 82
Query: 428 VCTTTPCWLRGS 463
VC C G+
Sbjct: 83 VCRAEACQAVGA 94
>UniRef50_A3Z0U6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Synechococcus sp. WH 5701|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Synechococcus sp. WH 5701
Length = 168
Score = 40.3 bits (90), Expect = 0.021
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +2
Query: 257 AMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCT 436
A+I +L AQ+ +L + VA L LP RV A+FY +F +P ++ VCT
Sbjct: 36 ALIEVLHGAQKLYS-YLSDDLLRHVATRLQLPLSRVKGTASFYHLFRFQPPARHRCVVCT 94
Query: 437 TTPCWLRGS 463
T C ++G+
Sbjct: 95 GTACQIQGA 103
>UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=1;
Psychroflexus torquis ATCC 700755|Rep: Formate
dehydrogenase, beta subunit - Psychroflexus torquis ATCC
700755
Length = 243
Score = 38.3 bits (85), Expect = 0.083
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +2
Query: 200 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVAT 379
NQ + + I PE +R +I L L Q L + +A ++NLP ++EVA+
Sbjct: 25 NQAAINNVKTILPEILQRDMLIEYLHLIQ-DKVSHLSSDNLSALAFLMNLPLSEIWEVAS 83
Query: 380 FYTMFI-----RRPIGKYHVQVCTTTPCWLRGSD 466
FY F + P +++CT+ C L S+
Sbjct: 84 FYDHFTLVKDSQNPPPTRTIRICTSVTCSLFNSE 117
>UniRef50_Q483I3 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Colwellia psychrerythraea 34H|Rep: Formate
dehydrogenase, gamma subunit - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 168
Score = 37.9 bits (84), Expect = 0.11
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +2
Query: 254 GAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVC 433
GA++P+L Q + ++P A+ VA+ L +Y V TFY F G++ +++C
Sbjct: 26 GALLPILHDIQH-HFDYIPKKAIAIVAQGLQQTEAEIYGVITFYAHFQLNKPGRHIIEIC 84
Query: 434 TTTPCWLRGS 463
C GS
Sbjct: 85 RGEACQAMGS 94
>UniRef50_Q0AL75 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Maricaulis maris MCS10|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Maricaulis
maris (strain MCS10)
Length = 163
Score = 37.5 bits (83), Expect = 0.14
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +2
Query: 257 AMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHVQVCT 436
A+I +L Q + G + +A+ +A+ LNL R V V +FY F R+P ++ ++C
Sbjct: 26 ALIEVLHWLQA-SAGHISDAAIATIADALNLSRAEVLGVVSFYHDFRRQPGARHTFKLCR 84
Query: 437 TTPCWLRGSD 466
C G++
Sbjct: 85 AEACQAAGAE 94
>UniRef50_A4XP94 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Pseudomonas mendocina ymp|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Pseudomonas
mendocina ymp
Length = 164
Score = 37.1 bits (82), Expect = 0.19
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 176 IPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLL-DLAQRXNGGWLPISAMHKVAEILNLP 352
+P F AP Q + + GA++P+L D+ R G +P + +AE L L
Sbjct: 4 LPQRF-APEQCEAVTREVLAAHRGQPGALLPILHDIQDRL--GAVPPELLPLIAEDLCLS 60
Query: 353 RMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRG 460
R V+ V +FY F P G+ +++C C G
Sbjct: 61 RAEVHGVVSFYHDFRATPPGRQVLKLCQAEACQSMG 96
>UniRef50_Q63RZ3 Cluster: NAD-dependent formate dehydrogenase gamma
subunit; n=28; Burkholderia|Rep: NAD-dependent formate
dehydrogenase gamma subunit - Burkholderia pseudomallei
(Pseudomonas pseudomallei)
Length = 171
Score = 36.3 bits (80), Expect = 0.33
Identities = 21/91 (23%), Positives = 45/91 (49%)
Frame = +2
Query: 194 APNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEV 373
+P+ +AL+ + + + +++ +L Q + G++P + + +A+ LNL R V+ V
Sbjct: 16 SPHSVAPDALVRAHAQPGR--SLVAILHAIQ-DDAGYVPPACVEPLAKALNLSRAEVHGV 72
Query: 374 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 466
T+Y F P +++C C G +
Sbjct: 73 LTYYHHFRTAPPAHVTIRLCRAEACRSMGGE 103
>UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,
beta subunit; n=41; Proteobacteria|Rep: Formate
dehydrogenase, NAD(P) reducing, beta subunit - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 585
Score = 35.5 bits (78), Expect = 0.58
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = +2
Query: 197 PNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPISAMHKVAEILNLPRMRVYEVA 376
P R+ A A+ E + +I L Q +G L + +AE + L R V+EVA
Sbjct: 36 PASARLAASAALAGETPRADRLIEYLHRLQDEHGA-LHADHLAALAEAMKLARAEVFEVA 94
Query: 377 TFYTMFIRRPIG-----KYHVQVCTTTPCWLRG 460
TFY F P G V+VC + C + G
Sbjct: 95 TFYHHFDFVPAGGKAPPALTVRVCESLGCAMAG 127
>UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit; n=1; Dechloromonas aromatica RCB|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit - Dechloromonas aromatica (strain RCB)
Length = 632
Score = 35.5 bits (78), Expect = 0.58
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 302 WLPISAMHKVAEILNLPRMRVYEVATFYTMFIRRPIGKYHV 424
W+ A+ ++ L +PR ++ VA FY F P GKY V
Sbjct: 42 WISPEAIDRMQVTLGVPRTKIEGVAGFYAFFYTEPRGKYRV 82
>UniRef50_A7RRZ0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 188
Score = 33.1 bits (72), Expect = 3.1
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -3
Query: 433 THLYMILSYWSPNKHSIECCNFIHSHSW*V*NFSYFVHGRNW 308
+H ++ LSY + H + + IHSH+W S+ +H ++W
Sbjct: 141 SHHWVTLSYLIHSHHWVTLSHLIHSHNW--VTLSHLIHSQHW 180
>UniRef50_Q5NPV1 Cluster: Two-component response regulator; n=3;
Sphingomonadales|Rep: Two-component response regulator -
Zymomonas mobilis
Length = 300
Score = 32.3 bits (70), Expect = 5.4
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 140 FVHRDTPEDNPS-IPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPIS 316
F+H+ +P N + IP A + +EA+L Y +G GA+ L + NGG L +
Sbjct: 16 FIHQMSPRANQAFIPVNCAALPETMLEAMLFGYTKGSFTGALADNKGLFRSANGGTLLLD 75
Query: 317 AMHKVAEILNLPRMRVYE 370
+ ++ L +RV +
Sbjct: 76 EISELPLGLQAKLLRVLQ 93
>UniRef50_Q9Z5S2 Cluster: Torf protein; n=2; Zymomonas mobilis|Rep:
Torf protein - Zymomonas mobilis
Length = 403
Score = 32.3 bits (70), Expect = 5.4
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 140 FVHRDTPEDNPS-IPFEFTAPNQKRVEALLAIYPEGHKRGAMIPLLDLAQRXNGGWLPIS 316
F+H+ +P N + IP A + +EA+L Y +G GA+ L + NGG L +
Sbjct: 157 FIHQMSPRANQAFIPVNCAALPETMLEAMLFGYTKGSFTGALADNKGLFRSANGGTLLLD 216
Query: 317 AMHKVAEILNLPRMRVYE 370
+ ++ L +RV +
Sbjct: 217 EISELPLGLQAKLLRVLQ 234
>UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;
n=6; Proteobacteria|Rep: NADH dehydrogenase (Quinone)
precursor - Acidovorax sp. (strain JS42)
Length = 640
Score = 31.9 bits (69), Expect = 7.2
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Frame = +2
Query: 212 VEALLAIYP-EGHKRGAMIPLLDLAQRXNGGWLPISAMHKVA--EILNLPRMRVYEVATF 382
V LL P +G++R +I L R N + + H VA +NLP +VYEVA+F
Sbjct: 45 VAQLLGPRPADGYRRDLLIEYL---HRLNDHFGVLHDRHLVALARQMNLPMAQVYEVASF 101
Query: 383 YTMF--IR---RPIGKYHVQVCTTTPCWLRGS 463
Y F +R + V+VC + C + G+
Sbjct: 102 YHHFEIVRGHDAQAPRLVVRVCDSLSCTMAGA 133
>UniRef50_Q55Y42 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 294
Score = 31.9 bits (69), Expect = 7.2
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 48 CYLASKLGFRPCGACLLEVCRP-LLPSSMTVSSSTETPLKTTLVSRL 185
CYL L F C ACLL C+P LPS S + PL ++V R+
Sbjct: 24 CYLHDFLPFN-CPACLLAFCQPHFLPS----QHSCKAPLPASMVDRI 65
>UniRef50_A5I5J7 Cluster: Sensor protein; n=4; Clostridium
botulinum|Rep: Sensor protein - Clostridium botulinum A
str. ATCC 3502
Length = 702
Score = 31.5 bits (68), Expect = 9.5
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +2
Query: 137 LFVHRDTPEDNPSIPFEFTAPNQKRVEALLAIYP---EGHKRGAMIPLLDLAQ 286
+F+ ++ IP FT N ++V L + P EG K+GA++ L+D+ Q
Sbjct: 89 VFIALKEQKEIKEIPLIFTKNNYEKVCFSLTVIPINLEGTKKGALVNLMDITQ 141
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,555,388
Number of Sequences: 1657284
Number of extensions: 8100686
Number of successful extensions: 19719
Number of sequences better than 10.0: 151
Number of HSP's better than 10.0 without gapping: 19269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19684
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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