Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_I18
(562 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC409.18 |||phosphatidic acid phosphatase |Schizosaccharomyces... 75 9e-15
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 32 0.050
SPBC2D10.05 |exg3||glucan 1,3-beta-glucosidase Exg3|Schizosaccha... 28 0.82
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 3.3
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 26 3.3
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 26 4.4
SPBC16C6.03c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 4.4
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 26 4.4
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 26 4.4
>SPBC409.18 |||phosphatidic acid phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 279
Score = 74.5 bits (175), Expect = 9e-15
Identities = 47/139 (33%), Positives = 71/139 (51%)
Frame = +1
Query: 145 LLMNLCIIEVMKGIVGNPRPVFFELCQPDTAKTCNGSEYVGTFTCTSSYSWWYQMDSYRS 324
++ LC+ ++K VG PRP F CQP + G V +C+ +S D +RS
Sbjct: 101 MVCGLCV-SLLKNAVGRPRPDFLARCQPFESTPKTG--LVDVLSCSVPWSDKVLQDGFRS 157
Query: 325 FPSGHTSMSVYCGFFLAWYLQNRAFNWSHRSVVLVPVLQMLCISYAIVCSLTRITDHRHH 504
FPSGHTS S FLA +L + + +++ V+ ++ +S A L+R D+RHH
Sbjct: 158 FPSGHTSFSFAGLGFLAIFLAGQLKMFRNKTSSWKVVVPLVPLSIASWIGLSRSQDYRHH 217
Query: 505 WWDVTVGAAVGLLTLLYAV 561
D+ VGA G + Y V
Sbjct: 218 KEDIAVGALFG-FAIAYVV 235
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 32.3 bits (70), Expect = 0.050
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +1
Query: 325 FPSGHTSMSVYCGFFLAWYLQNRAFNWSHRSVVLVPVLQMLCISYAIVCSLTRITDHRHH 504
FPS HT+ ++ GF+ + L + + + S S L L + Y SL RI H
Sbjct: 143 FPSTHTTNAMATGFYSLFLLLSMSDSMSSISYYF---LLSLVLLYIASISLGRIYCGMHG 199
Query: 505 WWDVTVGAAVGLLTLLY 555
+ DV+ G +G+ ++
Sbjct: 200 FMDVSTGTILGVTLAIF 216
>SPBC2D10.05 |exg3||glucan 1,3-beta-glucosidase
Exg3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 464
Score = 28.3 bits (60), Expect = 0.82
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Frame = +1
Query: 238 KTCNGSEYVGTFTCTSSYSWWYQMDSY----RSFPSGHTSMSV-YCGFFLAW---YLQNR 393
KT + +G ++CT S W Q + R F + + YCG W +L +
Sbjct: 278 KTKLSNIVIGEWSCTLSQESWSQTKLHDKRRRDFGEAQLNQYLNYCGGCFFWTYKFLHGK 337
Query: 394 AFNWSHRSVV 423
+W RSVV
Sbjct: 338 GGDWDFRSVV 347
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 26.2 bits (55), Expect = 3.3
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 262 VGTFTCTSSYSWWYQMDSYRSFPSGHTSMSVYCGFFL 372
VG+ SS WWY S S +YC FL
Sbjct: 1967 VGSIYTVSSVFWWYLYRMLPSVASLSLPFLLYCASFL 2003
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 26.2 bits (55), Expect = 3.3
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 409 HRSVVLVPVLQMLCISYAIVCSLTRITDHRHHWWDV 516
HR + VL ++C S ++ + +WWDV
Sbjct: 801 HRIAMSFSVLSLICPSRTLIIDKACVEKTWPYWWDV 836
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 25.8 bits (54), Expect = 4.4
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 289 YSWWYQMDSYRSF 327
Y++WY DS+RSF
Sbjct: 220 YNFWYNFDSWRSF 232
>SPBC16C6.03c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 158
Score = 25.8 bits (54), Expect = 4.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 213 KENWPRIANNAFHNFYNTQIHQKSI 139
K+NWP +N NTQ+ Q++I
Sbjct: 113 KKNWPTESNIRSKQLLNTQLEQENI 137
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.8 bits (54), Expect = 4.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 133 KSYKRRQIVGCFSKFLLANHNRRSRK 56
++ K R + CFSKF+ N RR ++
Sbjct: 311 QNIKERMVDFCFSKFMEKNQQRREQQ 336
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 25.8 bits (54), Expect = 4.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 133 KSYKRRQIVGCFSKFLLANHNRRSRK 56
++ K R + CFSKF+ N RR ++
Sbjct: 311 QNIKERMVDFCFSKFMEKNQQRREQQ 336
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,407,837
Number of Sequences: 5004
Number of extensions: 51609
Number of successful extensions: 137
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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