Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_I18
(562 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0257 + 2097785-2097797,2098080-2098189,2098299-2098392,209... 79 2e-15
01_06_0173 - 27221738-27221883,27222009-27222197,27222424-272225... 72 3e-13
05_07_0019 - 27090791-27090945,27091775-27091963,27092635-270926... 71 6e-13
08_02_0379 - 16506775-16506950,16507037-16507096,16507187-165073... 58 6e-09
08_02_0380 - 16512461-16512522,16512696-16512857,16512942-165130... 57 1e-08
09_02_0373 - 8098060-8098229,8098316-8098375,8098486-8098674,809... 50 2e-06
01_06_0348 + 28598822-28599055,28599146-28599233,28599322-285993... 37 0.010
02_05_0445 + 29088216-29088362,29089161-29089386,29089903-290899... 31 0.63
07_01_0698 - 5269329-5269579,5270673-5270928,5271158-5271725,527... 29 1.9
07_01_1173 + 11092482-11093465,11093552-11093914 29 2.5
05_05_0114 - 22488172-22488279,22488414-22488511,22488616-224887... 29 2.5
03_06_0364 + 33392181-33392487,33392919-33392994,33393671-333937... 29 3.4
08_02_1543 + 27783063-27783182,27784321-27784485,27784577-277846... 28 5.9
>01_01_0257 +
2097785-2097797,2098080-2098189,2098299-2098392,
2098786-2098974,2099061-2099120,2099231-2099391
Length = 208
Score = 79.0 bits (186), Expect = 2e-15
Identities = 46/136 (33%), Positives = 68/136 (50%)
Frame = +1
Query: 136 LYGLLMNLCIIEVMKGIVGNPRPVFFELCQPDTAKTCNGSEYVGTFTCTSSYSWWYQMDS 315
LY +L+ + V+K VG PRP FF C PD + + + G C S + D
Sbjct: 7 LYSVLITAVVTTVVKNAVGRPRPDFFWRCFPDGKQLYD--QVTGDVICHGEKS--FLKDG 62
Query: 316 YRSFPSGHTSMSVYCGFFLAWYLQNRAFNWSHRSVVLVPVLQMLCISYAIVCSLTRITDH 495
+SFPSGHTS S FL+ YL + + + V + +L + A + ++RI D+
Sbjct: 63 RKSFPSGHTSWSFAGLGFLSLYLSGKIKVFDRQGHVAKLCIMILPLLIASLVGISRIDDY 122
Query: 496 RHHWWDVTVGAAVGLL 543
RHHW DV G +G +
Sbjct: 123 RHHWEDVFAGGLLGFI 138
>01_06_0173 -
27221738-27221883,27222009-27222197,27222424-27222517,
27222647-27222756,27222849-27222936,27223046-27223279
Length = 286
Score = 72.1 bits (169), Expect = 3e-13
Identities = 43/136 (31%), Positives = 67/136 (49%)
Frame = +1
Query: 136 LYGLLMNLCIIEVMKGIVGNPRPVFFELCQPDTAKTCNGSEYVGTFTCTSSYSWWYQMDS 315
L+ +L+ + + +K VG PRP FF C PD + G C S +
Sbjct: 110 LFSVLITGVLTDAIKDAVGRPRPNFFWRCFPDGIAVFDNVT-TGVI-CHGDAS--VIKEG 165
Query: 316 YRSFPSGHTSMSVYCGFFLAWYLQNRAFNWSHRSVVLVPVLQMLCISYAIVCSLTRITDH 495
++SFPSGHTS S FL+WYL + + R V + + + A + +++R+ D+
Sbjct: 166 HKSFPSGHTSWSFAGLGFLSWYLAGKITVFDRRGHVAKLCVVLAPLLVAAMVAISRVDDY 225
Query: 496 RHHWWDVTVGAAVGLL 543
HHW DV G +GL+
Sbjct: 226 WHHWQDVCTGGVLGLV 241
>05_07_0019 -
27090791-27090945,27091775-27091963,27092635-27092694,
27092793-27092981,27093116-27093209,27093319-27093428,
27093657-27093969
Length = 369
Score = 70.9 bits (166), Expect = 6e-13
Identities = 43/136 (31%), Positives = 65/136 (47%)
Frame = +1
Query: 136 LYGLLMNLCIIEVMKGIVGNPRPVFFELCQPDTAKTCNGSEYVGTFTCTSSYSWWYQMDS 315
L+ +L+ + + +K VG PRP FF C PD N C S +
Sbjct: 107 LFSVLITAVLTDAIKDGVGRPRPNFFWRCFPDGIPKYNN--ITRGVICHGDKS--VIKEG 162
Query: 316 YRSFPSGHTSMSVYCGFFLAWYLQNRAFNWSHRSVVLVPVLQMLCISYAIVCSLTRITDH 495
++SFPSGHTS S FL+WYL + + V + +L + A + ++R+ D+
Sbjct: 163 HKSFPSGHTSWSFAGLGFLSWYLAGKIKAFDRGGHVAKLCIVVLPLLIAAMVGVSRVDDY 222
Query: 496 RHHWWDVTVGAAVGLL 543
HHW DV G +GL+
Sbjct: 223 WHHWQDVFTGGILGLV 238
>08_02_0379 -
16506775-16506950,16507037-16507096,16507187-16507375,
16508131-16508224,16508276-16508300,16508690-16508796,
16508903-16509021,16510520-16510658
Length = 302
Score = 57.6 bits (133), Expect = 6e-09
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 310 DSYRSFPSGHTSMSVYCGF-FLAWYLQNRAFNWSHRSVVLVPVLQMLCISYAIVCSLTRI 486
+ Y+SFPSGH+S + G FLAWYL + + + L L + A + +++R+
Sbjct: 150 EGYKSFPSGHSS-GAFAGLGFLAWYLAGKLKAFKREGHIAKLCLVFLPLLVASLVAVSRV 208
Query: 487 TDHRHHWWDVTVGAAVGL 540
D+ HHW DV G +GL
Sbjct: 209 DDYWHHWQDVFAGGIIGL 226
>08_02_0380 -
16512461-16512522,16512696-16512857,16512942-16513001,
16513100-16513288,16514127-16514220,16514681-16514896
Length = 260
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = +1
Query: 310 DSYRSFPSGHTSMSVYCGFFLAWYLQNRAFNWSHRSVVLVPVLQMLCISYAIVCSLTRIT 489
+ ++SFPSGH+S S FLAWYL + + + + + L + A + +++R+
Sbjct: 92 EGHKSFPSGHSSWSFAGLGFLAWYLAGKLKAFDRKGHIAKLCIVFLPLLVASLVAVSRVD 151
Query: 490 DHRHHWWDVTVGAAVGL 540
D+ HHW DV G +GL
Sbjct: 152 DYWHHWQDVFAGGIIGL 168
>09_02_0373 -
8098060-8098229,8098316-8098375,8098486-8098674,
8098994-8099108,8099374-8099427,8099600-8099709,
8099792-8099879,8099969-8100181
Length = 332
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 21/156 (13%)
Frame = +1
Query: 136 LYGLLMNLCIIEVMKGIVGNPRPVFFELCQPDTA-KTCNGSEYVGTFTCTSSYSWWY--- 303
LY +L+ I + +K VG PRP FF C PD + + + F + +
Sbjct: 103 LYSVLITAVITDAIKDGVGRPRPDFFWRCFPDGKDRRVSSKKVTRAFQAGTLHELTIALR 162
Query: 304 -QMDSYRSF-------------PSGHTSMSV--YCGF-FLAWYLQNRAFNWSHRSVVLVP 432
Q+ R F P+G+ + G FLAWYL + + R V
Sbjct: 163 PQLGVGRDFLMQKLVWCNGGWEPAGNVDNYARSFAGLGFLAWYLAGKITVFDRRGHVAKL 222
Query: 433 VLQMLCISYAIVCSLTRITDHRHHWWDVTVGAAVGL 540
+ L + A + +++R+ D+ HHW DV G+ +GL
Sbjct: 223 CIVFLPLLTAALVAVSRVDDYWHHWQDVFAGSLIGL 258
>01_06_0348 +
28598822-28599055,28599146-28599233,28599322-28599377,
28599538-28599631,28599824-28599865,28599941-28600012,
28600134-28600193,28600490-28600683
Length = 279
Score = 37.1 bits (82), Expect = 0.010
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = +1
Query: 310 DSYRSFPSGHTSMSVYCGFFLAWYLQNRAFNWSHRSVVLVPVLQMLCISYAIVCSLTRIT 489
+ ++SFPSGHTS S FL+WYL A + +++R+
Sbjct: 146 EGHKSFPSGHTSWSFAGLGFLSWYL-------------------------AALVAVSRVD 180
Query: 490 DHRHHWWDVTVGAAVGLL 543
D+ HHW DV G +GL+
Sbjct: 181 DYWHHWQDVFTGGILGLV 198
>02_05_0445 +
29088216-29088362,29089161-29089386,29089903-29089976,
29090129-29090353
Length = 223
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +1
Query: 328 PSGHTSMSVYCGFFLAWYLQNRAFNWSHRSVVLVPVLQMLCISYAIVCSLTRITDHRHHW 507
PS H +Y FL L F W R+ + V +L + ++ S R++ H H
Sbjct: 107 PSSHAQSFLYSAVFLILSL----FYWLGRTYLSV-ILGVAILAMCCYLSWLRVSQHLHTL 161
Query: 508 WDVTVGAAVG 537
V VGA VG
Sbjct: 162 NQVLVGAIVG 171
>07_01_0698 -
5269329-5269579,5270673-5270928,5271158-5271725,
5271757-5272763
Length = 693
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 49 ELIFGCGDYDLQARTLRSIRQSVCVYRTYLYGLLMNLCI--IEVMKGIVGNPRPVFFELC 222
EL F CG +L + +RS+ + V Y + + I + V K + +P +FF C
Sbjct: 531 ELHFICGVNELVSGPVRSLGEKVGDYNPWTRDKYYHTHINFLAVCKARLYDPPTLFFAEC 590
Query: 223 QPDTAKTC 246
D A TC
Sbjct: 591 GKDGADTC 598
>07_01_1173 + 11092482-11093465,11093552-11093914
Length = 448
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 25 PIVMTLITELIFGCGDYDLQARTLRSIRQSVCVYR 129
P + L + +FGC +++RTLRS+ SV + R
Sbjct: 187 PALAALSLDRVFGCRSLRVRSRTLRSLTVSVSLRR 221
>05_05_0114 -
22488172-22488279,22488414-22488511,22488616-22488784,
22489310-22489377,22490485-22490521,22490660-22490741,
22490845-22490903
Length = 206
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 342 FYVCLLRFLPSVVPPESCVQLVSSLGGLSAGVADALH 452
++V LLR LP + PP S + G L+ + + +H
Sbjct: 20 WFVALLRLLPCLAPPSSVHSSYAVAGDLTWAILETIH 56
>03_06_0364 +
33392181-33392487,33392919-33392994,33393671-33393740,
33394291-33394320,33394724-33394867,33394954-33395058,
33395496-33395642,33396994-33397069,33397726-33397814,
33398178-33398269,33398351-33398390,33398475-33398531
Length = 410
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +3
Query: 330 VRTHFYVCLLRFLPSVVPPESCVQLVSSLGGLSAG 434
V H LL LPS VP SCV VS G S G
Sbjct: 62 VSIHHLFLLLPLLPSAVPEFSCVFTVSRARGDSDG 96
>08_02_1543 +
27783063-27783182,27784321-27784485,27784577-27784686,
27784771-27784876,27784952-27785050,27785450-27786607
Length = 585
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 277 CTSSYSWWYQMDSYRSFPSGHTSMSVYCGFFLAWYLQ 387
C+ Y WW++ SY + S + +Y GF+ LQ
Sbjct: 504 CSEDYMWWWR--SYLTSGSSAIYLFLYAGFYFFTKLQ 538
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,920,133
Number of Sequences: 37544
Number of extensions: 344744
Number of successful extensions: 807
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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