Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_I14
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    29   0.024
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   1.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   4.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.4  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 29.1 bits (62), Expect = 0.024
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +2

Query: 95  FQMLSINF--VEYWNVTLYINQIYSQHRFPNIMYFLLLKCHNKVRTRSVVYGIYY 253
           +Q+L+ NF   +YW+  L   ++    +    +Y+LLL   N +   ++ Y +YY
Sbjct: 67  YQILAYNFWKKKYWSEFLANLKLLKGRKIRKNLYYLLLFVINVLYVLTLCYAVYY 121


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 511 YSYISCVFVCVLKSFY 464
           Y+Y  CV VC+ +  Y
Sbjct: 158 YTYFLCVIVCIFRGKY 173


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 226 KICGVWYLLP 255
           K+CGVW  +P
Sbjct: 227 KVCGVWKRIP 236


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 473 KFLRVF*TPFRYLIQYTYLISLHQERENFNFFK 375
           K+L+V  T   ++  +   I++ +   N+NF K
Sbjct: 21  KYLKVLVTFAHFICLFPITINIRKNGLNYNFTK 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,783
Number of Sequences: 336
Number of extensions: 1991
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)