BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_I12 (506 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_16903| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 4e-31 SB_55500| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=2.8e-24) 41 5e-04 SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.008 SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72 SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72 SB_4001| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0056) 30 1.3 SB_54431| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7 SB_21241| Best HMM Match : ErmC (HMM E-Value=1.1) 29 2.2 SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1 SB_52208| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7 SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05) 27 8.9 SB_25675| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 27 8.9 >SB_16903| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 263 Score = 131 bits (316), Expect = 4e-31 Identities = 64/112 (57%), Positives = 79/112 (70%) Frame = +2 Query: 167 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD*T 346 L EKR +NF IG DIQP RDLSRFVRWP+Y+++QRQK++L +RLKVPP INQFTQ LD Sbjct: 31 LIEKRPRNFGIGGDIQPKRDLSRFVRWPRYVKLQRQKSLLYQRLKVPPAINQFTQALDRQ 90 Query: 347 TAKGLFKILEKYRPETEAVRKERLKKAAEANVCLRKNEPSPKRPNTLRAGTN 502 + LFK+L KYRPET+A +K RL AE K E K+P ++ G N Sbjct: 91 STVQLFKLLHKYRPETKAEKKARLSAKAEKK-AEGKEEAPGKKPMLVKYGIN 141 >SB_55500| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=2.8e-24) Length = 172 Score = 41.1 bits (92), Expect = 5e-04 Identities = 22/48 (45%), Positives = 28/48 (58%) Frame = +2 Query: 359 LFKILEKYRPETEAVRKERLKKAAEANVCLRKNEPSPKRPNTLRAGTN 502 LFK+L KYRPET+A +K RL AE K E K+P ++ G N Sbjct: 4 LFKLLHKYRPETKAEKKARLSAKAEKK-AEGKEEAPGKKPMLVKYGIN 50 >SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1272 Score = 37.1 bits (82), Expect = 0.008 Identities = 37/124 (29%), Positives = 50/124 (40%), Gaps = 4/124 (3%) Frame = +1 Query: 97 DREKSSGRSTCGEES*AQEDCKPSIREENKELCYWPGHPANQRSIPFRAMAEIYSHPASK 276 DR+KS+GR++ A + K S R E++ + P R A E SH S Sbjct: 978 DRQKSNGRNSRSVSPSAVKRTKGSKRSESRSVSRSPERDRKGRD---SAKKERQSHSESP 1034 Query: 277 GCVTASSQSAAANQPVHPDIRLNHS----QRSVQDLGEIQARN*GSQERASKESRRSQCL 444 VT SS+ +P H S +RS R R S+ SRRS Sbjct: 1035 QRVTKSSKERPRKRPRHQSRERRPSSSPPRRSRPQRTSPSPRRTPEDRRRSRGSRRSPSP 1094 Query: 445 PKKE 456 PK+E Sbjct: 1095 PKRE 1098 >SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2468 Score = 30.7 bits (66), Expect = 0.72 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = +2 Query: 359 LFKILEKYRPET---EAVRKERLKKAAEANVCLRKNEPSPKRPNTLRAGTN 502 LF + EK+ E E +++ KKAAEA K E K+ +AG++ Sbjct: 621 LFPVFEKHLSEEIDKEKKEEQKKKKAAEAKAAASKKEEDEKKAEASKAGSS 671 >SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 163 Score = 30.7 bits (66), Expect = 0.72 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = +1 Query: 103 EKSSGRSTCGEES*AQEDCKPSIREENKELCY 198 EK G TCG+ES DC P +E E CY Sbjct: 94 EKKEGCYTCGDESHIARDC-PEKKESPGESCY 124 >SB_4001| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0056) Length = 508 Score = 29.9 bits (64), Expect = 1.3 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = +1 Query: 229 IPFRAMAEIYSHPA-SKGCVTASSQSAAANQPVHPDIRLNHSQRSVQDLGEIQA 387 +P + HP S GC T SS S A PV PD + + Q L E+ A Sbjct: 65 LPVVTTVDSTGHPQLSSGCSTNSSSSQTAPFPVIPDTIIANMQSLFAKLDELYA 118 >SB_54431| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1023 Score = 29.5 bits (63), Expect = 1.7 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +1 Query: 271 SKGCVTASSQSAAANQPVHPDIRLNHSQRSVQDLGEIQA 387 S GC T SS S A PV PD + + Q + L E+ A Sbjct: 286 SSGCSTNSSSSQTARFPVIPDTIIANMQSLLPKLDELYA 324 >SB_21241| Best HMM Match : ErmC (HMM E-Value=1.1) Length = 562 Score = 29.1 bits (62), Expect = 2.2 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +2 Query: 371 LEKYRPETEAVRKERLKKAAEANVCLRKNEPSPKR 475 L+ RP R +R+K+ AE N+ L +EP P++ Sbjct: 255 LQNQRPTLLRNRDKRIKRRAEDNLRLSADEPDPRQ 289 >SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 956 Score = 27.9 bits (59), Expect = 5.1 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +2 Query: 359 LFKILEKYRPETEAVRKERLKKAAEANVCLRKNEPSPK 472 L K+LEK PE +A+ + L + C KNEP K Sbjct: 892 LEKMLEKLHPECDALLQTPLVNFDKKGSCWYKNEPLGK 929 >SB_52208| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 640 Score = 27.5 bits (58), Expect = 6.7 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +2 Query: 359 LFKILEKYRPETEAVRKERLKKAAEANVCLRKNEPSPK 472 L K+LEK PE +A+ + L + C KNEP K Sbjct: 249 LEKMLEKLHPECDALFQTPLVNFDKKGSCWYKNEPLGK 286 >SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05) Length = 720 Score = 27.1 bits (57), Expect = 8.9 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +2 Query: 353 KGLFKILEKYRPETEAVRKERLKKAAEANVCLRKNEPSPKRP 478 KGL +LEK + +A +K+R + + N +K++ K+P Sbjct: 225 KGLKGVLEKIKQARKASKKKRARARKKHNKTSKKSKHVSKKP 266 >SB_25675| Best HMM Match : Extensin_2 (HMM E-Value=0.18) Length = 485 Score = 27.1 bits (57), Expect = 8.9 Identities = 11/37 (29%), Positives = 20/37 (54%) Frame = +2 Query: 365 KILEKYRPETEAVRKERLKKAAEANVCLRKNEPSPKR 475 K++ K++PE V K +K N+ ++ EP K+ Sbjct: 230 KLVGKWQPEESTVEKAIIKPGKLTNIEFKETEPEEKQ 266 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,199,917 Number of Sequences: 59808 Number of extensions: 304439 Number of successful extensions: 802 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 730 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 801 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1111677931 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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