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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_I11
         (511 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0649 - 18402976-18403220,18403305-18404499                       47   1e-05
11_04_0234 + 15187065-15188241,15188316-15188494                       42   4e-04
12_02_0232 - 16015174-16015244,16015861-16016671,16018412-16018861     32   0.23 
12_02_0239 - 16125105-16126025,16126966-16127415                       30   0.94 
12_02_0234 - 16043995-16044894,16050069-16050200,16050278-16050718     29   2.2  
03_05_1021 - 29750155-29750220,29750342-29750428,29750614-297507...    29   2.2  
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272...    29   2.9  
12_02_0237 - 16087083-16087201,16087531-16088341,16097713-16098156     28   3.8  
12_02_0292 + 16979550-16980662,16983249-16983731                       27   6.6  
08_02_0113 - 12715888-12716181,12717443-12717602,12718327-127183...    27   6.6  
05_03_0191 - 9521496-9521921                                           27   6.6  
02_05_0272 - 27348537-27348728,27349035-27349192,27349292-273493...    27   6.6  
07_03_1383 + 26172329-26172448,26172770-26172961                       27   8.8  
06_02_0206 + 13005863-13005966,13006918-13007080,13008534-130086...    27   8.8  

>04_03_0649 - 18402976-18403220,18403305-18404499
          Length = 479

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
 Frame = +2

Query: 128 DVPS--IINLVDIVNIQAFDYYTP-ERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQN 298
           D PS  +   +D VN+ AF    P   N     + AP+Y   +R    +A   +  W+  
Sbjct: 215 DYPSETVARSLDWVNVMAFGLRPPGAANANATAFDAPLY---DRASHYSASYGVVSWLDA 271

Query: 299 GAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEI 463
           G P  K+V+GI   GR+W L + +      P+ A    + G  +   G +SY E+
Sbjct: 272 GVPASKVVMGIPLYGRSWFLRNKANSGVGAPVVAAGPKQRG--SNATGAMSYAEV 324


>11_04_0234 + 15187065-15188241,15188316-15188494
          Length = 451

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
 Frame = +2

Query: 110 NSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYW 289
           ++++ + +  + + +D VNI  F  +    N   AD  AP+Y   ++D   +A   +  W
Sbjct: 214 DTNLNYPIDDMSSSLDWVNIITFSLHK-NSNVTTAD--APLY---DKDSHFSASYGVISW 267

Query: 290 IQNGAPTHKLVLGISTTGRTWKL-DSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEI 463
           +  G P  KLV+GI   GR+W L + D    G P   A  G +     ++ G+++Y EI
Sbjct: 268 LDAGLPPCKLVMGIPLFGRSWFLRNKDKNGLGAPT--AAAGTKQRKSNQI-GVIAYAEI 323


>12_02_0232 - 16015174-16015244,16015861-16016671,16018412-16018861
          Length = 443

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +2

Query: 35  LVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDI 160
           LVR+ K  +  K NMQL++ +LP      Y  V  I    DI
Sbjct: 340 LVRKAKHEMKTKENMQLMVDLLPLWREKPYIKVERIFETCDI 381


>12_02_0239 - 16125105-16126025,16126966-16127415
          Length = 456

 Score = 30.3 bits (65), Expect = 0.94
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 35  LVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDI 160
           LVR+ K  +  + NMQL++ V+P      Y  V  I    DI
Sbjct: 340 LVRKAKHKIRTEENMQLMVDVMPLWYEKPYIKVQRIFETCDI 381


>12_02_0234 - 16043995-16044894,16050069-16050200,16050278-16050718
          Length = 490

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 35  LVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDI 160
           LVR+ K  +  + NMQL + +LP      Y  V  I    DI
Sbjct: 381 LVRKAKDEMKTEENMQLRVDLLPLWREKPYIKVQRIFEACDI 422


>03_05_1021 -
           29750155-29750220,29750342-29750428,29750614-29750799,
           29750965-29751059,29751179-29751284,29751378-29751452,
           29751548-29751679,29751782-29751961,29752371-29752567,
           29752651-29752906
          Length = 459

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +2

Query: 317 LVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAK 472
           LV+G   +  T  L    E+SG+P    D     GP  K+   L++ E+  K
Sbjct: 365 LVVGGWNSSNTSHLQEIGELSGIPSYWIDSEQRIGPGNKISYKLNHGELVEK 416


>07_01_0365 +
           2718707-2718839,2719335-2719405,2719512-2719955,
           2720660-2721802
          Length = 596

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 252 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 362
           ++Y +PT++ + GF   +    LSLV+A L+  GS +
Sbjct: 293 VMYYSPTIVQLAGFASNQTALALSLVTAGLNAAGSLV 329


>12_02_0237 - 16087083-16087201,16087531-16088341,16097713-16098156
          Length = 457

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 35  LVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDI 160
           LVR+ K  + ++ NMQL + +LP      Y  +  I    DI
Sbjct: 338 LVRKAKDEMMIEENMQLRVDLLPLWREKPYIKLQRIFETCDI 379


>12_02_0292 + 16979550-16980662,16983249-16983731
          Length = 531

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 310 PQTCPWYQHHWTYVEARFR 366
           P+   W QHHWT    R R
Sbjct: 505 PEAKSWRQHHWTPARTRLR 523


>08_02_0113 -
           12715888-12716181,12717443-12717602,12718327-12718368,
           12718443-12718465,12718616-12720653,12720736-12720965,
           12722207-12722329,12722438-12723010,12724684-12724733,
           12726828-12726923,12726987-12727394,12727609-12727795
          Length = 1407

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
 Frame = +2

Query: 74  NMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRD 253
           ++Q+++S  P     + F V +  N + +V + A   +T     K+AD  +     Q R 
Sbjct: 570 DLQILLSSGPY--EELNFGVEAAENALSVVKLIAILIFTVHNANKDADNQSYAEIVQRRV 627

Query: 254 PLQNADAA----INYWIQNGAPTHKLVLGI 331
            LQNA AA    + Y ++  A  H +   I
Sbjct: 628 LLQNAFAAAFEFVGYLLKRCAELHDVASSI 657


>05_03_0191 - 9521496-9521921
          Length = 141

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 298 WCAYPQTCPWYQHHWTYVEARFR 366
           W   P+   W++ HWT   AR R
Sbjct: 119 WQRRPEAEKWWRRHWTPARARLR 141


>02_05_0272 -
           27348537-27348728,27349035-27349192,27349292-27349323,
           27349420-27349514,27349614-27349687,27349800-27349878,
           27350015-27350078,27350156-27350218,27350300-27350442,
           27350566-27350703,27350792-27350913,27350993-27351158,
           27351276-27351398,27351609-27351680,27351773-27351880,
           27352481-27352597,27352727-27352865,27352974-27353080,
           27353167-27353276,27353892-27354025,27354106-27354255,
           27354329-27354549,27354647-27355318
          Length = 1092

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
 Frame = +2

Query: 11  EHREGFTALVREMKQALNV-KPN---MQLVISVLPNVNSSIYFDVPSI 142
           EH E   AL    ++A+N+ KP    + L+I++LP+ N S+Y D+  I
Sbjct: 667 EHVE--RALKARYQEAMNILKPQGGELDLLIAILPDNNGSLYGDLKRI 712


>07_03_1383 + 26172329-26172448,26172770-26172961
          Length = 103

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 202 PQRGGLHCTDLRTAEPRSSTKRRR 273
           P RGG      R A P SS +RRR
Sbjct: 10  PARGGTAAASARAAPPSSSRRRRR 33


>06_02_0206 +
           13005863-13005966,13006918-13007080,13008534-13008632,
           13008704-13008817,13009094-13009254,13009746-13009827,
           13009972-13010057,13011563-13011742,13011913-13012424,
           13012844-13013478
          Length = 711

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 203 PKEADYTAPIYAPQNRDPLQNADAAI-NYWIQNGAP 307
           P+  D + PIY P    PL+N   A+ N   Q  AP
Sbjct: 167 PQRPDSSVPIYTPPQTQPLRNLPPALRNTERQQEAP 202


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,167,602
Number of Sequences: 37544
Number of extensions: 298292
Number of successful extensions: 839
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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