BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_I11 (511 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 60 1e-09 SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08 SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06 SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 47 1e-05 SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 29 2.9 SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0) 28 3.9 SB_17981| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1 SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 28 5.1 SB_3622| Best HMM Match : K167R (HMM E-Value=1.5) 28 5.1 SB_16588| Best HMM Match : Tropomyosin (HMM E-Value=3.3) 28 5.1 SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) 27 6.8 >SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) Length = 569 Score = 59.7 bits (138), Expect = 1e-09 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 7/157 (4%) Frame = +2 Query: 17 REGFTALVREMKQALNV------KPNMQLVISVLPN-VNSSIYFDVPSIINLVDIVNIQA 175 ++ FT L +E+ A + +P + L +V ++V I ++D++N+ A Sbjct: 265 KQRFTILCQELLDAFKLEAAQTNRPRLLLTAAVAAGKATIDKAYEVDKIGQILDLINLMA 324 Query: 176 FDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWK 355 +D P+ +TA + P + A YWI GAP K+ LG+ T GR +K Sbjct: 325 YDL-RGMWEPETGHHTA-LEGPPGEE--LTVSFAAQYWIDKGAPASKIALGLGTYGRAFK 380 Query: 356 LDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEIC 466 L +D G+ A+ G YT+ G L+Y EIC Sbjct: 381 L-ADQTRHGL-KAPANGNPTRGQYTREPGFLAYYEIC 415 >SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 438 Score = 54.8 bits (126), Expect = 4e-08 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 7/161 (4%) Frame = +2 Query: 5 ESEHREGFTALVREMKQALNV------KPNMQLVISVLPNVNS-SIYFDVPSIINLVDIV 163 E +HR FT L +E+ A KP + L +V + +++ ++ +D + Sbjct: 150 EDKHR--FTLLCQELLAAFETEAANTGKPRLLLTAAVSAGETTVKNGYEISALGQALDWI 207 Query: 164 NIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTG 343 N+ ++D + + + A + + DPL A++ WI G P++K+ LGI G Sbjct: 208 NLMSYDLHGDWEDT--TGHHAAMDSSTG-DPL-TVTHAVDLWIAGGMPSNKIALGIPLYG 263 Query: 344 RTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEIC 466 R++ L + ++ P A GG+ GPYTK G ++Y EIC Sbjct: 264 RSFTLKTANKTLDAP---ATKGGQ-GPYTKEAGYIAYFEIC 300 >SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 807 Score = 47.6 bits (108), Expect = 6e-06 Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 7/146 (4%) Frame = +2 Query: 11 EHREGFTALVREM------KQALNVKPNMQLVISVLPNVNS-SIYFDVPSIINLVDIVNI 169 + ++ FT L EM K A KP M L +V + ++V + ++D +N+ Sbjct: 532 QDKQHFTILCEEMLDAFKRKAADTDKPRMLLTAAVSAGHGTVDAAYEVHKLAGILDWINL 591 Query: 170 QAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRT 349 +D + P P +TA + P ++ A+ YW++ G P K+ LG++ G Sbjct: 592 MTYDLHGPWE-PYTGHHTALVGPPGDK---LTVSYAVKYWMEKGMPCGKIALGMANYGHA 647 Query: 350 WKLDSDSEISGVPPIHADXGGEAGPY 427 ++L ++ + P + + G + PY Sbjct: 648 FELSDPTKTALGAPANVNK-GRSYPY 672 >SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) Length = 829 Score = 46.8 bits (106), Expect = 1e-05 Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 11/136 (8%) Frame = +2 Query: 125 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYW----- 289 +D+ I +D +N+ +D + PK +TA P D L AI YW Sbjct: 584 YDIEGISKPLDWINVMTYDLHGTWE-PKTGHHTA--MGPDG-DKL-TLPFAIWYWMNNRD 638 Query: 290 ------IQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLS 451 I+NG P +K+VLG+ T GR + L+S + G +AG YT +G L+ Sbjct: 639 TWEKPGIRNGMPANKIVLGLGTYGRAFGLES----------AGNNGLDAGKYTGAKGFLA 688 Query: 452 YPEICAKLINPNQNGK 499 Y EIC + +N K Sbjct: 689 YFEICKMGLTVVENNK 704 >SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) Length = 184 Score = 28.7 bits (61), Expect = 2.9 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +2 Query: 419 GPYTKVQGLLSYPEIC 466 GPYT+ G LSY EIC Sbjct: 16 GPYTRESGFLSYYEIC 31 >SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0) Length = 915 Score = 28.3 bits (60), Expect = 3.9 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = +2 Query: 335 TTGRTWKLDSDSEISGVPPIHADXGGEAGPYT-KVQGLLSYPEI 463 T G+TW E G+P + A GG A P + + +LS +I Sbjct: 119 TAGKTWNASCFCEGRGMPLVGAVIGGAASPISLNIANVLSVNDI 162 >SB_17981| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1303 Score = 27.9 bits (59), Expect = 5.1 Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 9/117 (7%) Frame = +2 Query: 125 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 304 +D+ +I+++VD + I A+D + KE P A N P + +++ Sbjct: 171 YDLKAIVDIVDFMVIMAYD---QQSQIKE----GPCIAKAN-SPYSQTLEGVQQYLKLNI 222 Query: 305 PTHKLVLGISTTGRTW---KLDSDSEISGVPPIH------ADXGGEAGPYTKVQGLL 448 +KLVLG+ G + ++D ++I + + +D G PY V LL Sbjct: 223 SNNKLVLGLPWYGYDYPCEEIDEKNDICFIKKVPFRGVNCSDAAGTQIPYATVNDLL 279 >SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0) Length = 628 Score = 27.9 bits (59), Expect = 5.1 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +1 Query: 289 DSKWCAYPQTCPWYQHHWTYVEA 357 D + C+YP T PW WT + + Sbjct: 80 DERNCSYPTTGPWTTRPWTPISS 102 >SB_3622| Best HMM Match : K167R (HMM E-Value=1.5) Length = 441 Score = 27.9 bits (59), Expect = 5.1 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = -1 Query: 223 SVVRLFGVTFRCII--VKCLDVDNVDQVYDAWDVKVNGAIYVWQNADN*LHIGFYIECLF 50 SV F T + +I + C DV+ V + + V VNG QNA+ + + F + F Sbjct: 252 SVENRFSGTNKALIDAIVCQDVEEVKSILETEAVNVNG-----QNAEGFVPLEFAVMLGF 306 Query: 49 HLTYKSGEAF 20 H K +AF Sbjct: 307 HHIAKMLQAF 316 >SB_16588| Best HMM Match : Tropomyosin (HMM E-Value=3.3) Length = 430 Score = 27.9 bits (59), Expect = 5.1 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = +1 Query: 232 LRTAEPRSSTKRRRCYKLLD-SKWCAYPQTCPWYQHHWTYVEAR 360 LR + PRS ++ + K+ ++P P +HHWT E R Sbjct: 26 LRNSTPRSKARKPLQFTSPSHGKFKSFPVKSPVRRHHWTLEEER 69 >SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) Length = 942 Score = 27.5 bits (58), Expect = 6.8 Identities = 11/21 (52%), Positives = 11/21 (52%) Frame = +1 Query: 262 KRRRCYKLLDSKWCAYPQTCP 324 K RCY L DSK C P P Sbjct: 327 KAPRCYNLCDSKTCIIPTKAP 347 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,269,958 Number of Sequences: 59808 Number of extensions: 345454 Number of successful extensions: 889 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 806 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 881 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1123894172 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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