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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_I11
         (511 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)              60   1e-09
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)              55   4e-08
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)              48   6e-06
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)              47   1e-05
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)            29   2.9  
SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0)                28   3.9  
SB_17981| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.1  
SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0)                28   5.1  
SB_3622| Best HMM Match : K167R (HMM E-Value=1.5)                      28   5.1  
SB_16588| Best HMM Match : Tropomyosin (HMM E-Value=3.3)               28   5.1  
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)               27   6.8  

>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
          Length = 569

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
 Frame = +2

Query: 17  REGFTALVREMKQALNV------KPNMQLVISVLPN-VNSSIYFDVPSIINLVDIVNIQA 175
           ++ FT L +E+  A  +      +P + L  +V          ++V  I  ++D++N+ A
Sbjct: 265 KQRFTILCQELLDAFKLEAAQTNRPRLLLTAAVAAGKATIDKAYEVDKIGQILDLINLMA 324

Query: 176 FDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWK 355
           +D       P+   +TA +  P   +       A  YWI  GAP  K+ LG+ T GR +K
Sbjct: 325 YDL-RGMWEPETGHHTA-LEGPPGEE--LTVSFAAQYWIDKGAPASKIALGLGTYGRAFK 380

Query: 356 LDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEIC 466
           L +D    G+    A+     G YT+  G L+Y EIC
Sbjct: 381 L-ADQTRHGL-KAPANGNPTRGQYTREPGFLAYYEIC 415


>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 438

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
 Frame = +2

Query: 5   ESEHREGFTALVREMKQALNV------KPNMQLVISVLPNVNS-SIYFDVPSIINLVDIV 163
           E +HR  FT L +E+  A         KP + L  +V     +    +++ ++   +D +
Sbjct: 150 EDKHR--FTLLCQELLAAFETEAANTGKPRLLLTAAVSAGETTVKNGYEISALGQALDWI 207

Query: 164 NIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTG 343
           N+ ++D +    +     + A + +    DPL     A++ WI  G P++K+ LGI   G
Sbjct: 208 NLMSYDLHGDWEDT--TGHHAAMDSSTG-DPL-TVTHAVDLWIAGGMPSNKIALGIPLYG 263

Query: 344 RTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEIC 466
           R++ L + ++    P   A  GG+ GPYTK  G ++Y EIC
Sbjct: 264 RSFTLKTANKTLDAP---ATKGGQ-GPYTKEAGYIAYFEIC 300


>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 807

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
 Frame = +2

Query: 11  EHREGFTALVREM------KQALNVKPNMQLVISVLPNVNS-SIYFDVPSIINLVDIVNI 169
           + ++ FT L  EM      K A   KP M L  +V     +    ++V  +  ++D +N+
Sbjct: 532 QDKQHFTILCEEMLDAFKRKAADTDKPRMLLTAAVSAGHGTVDAAYEVHKLAGILDWINL 591

Query: 170 QAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRT 349
             +D + P   P    +TA +  P ++        A+ YW++ G P  K+ LG++  G  
Sbjct: 592 MTYDLHGPWE-PYTGHHTALVGPPGDK---LTVSYAVKYWMEKGMPCGKIALGMANYGHA 647

Query: 350 WKLDSDSEISGVPPIHADXGGEAGPY 427
           ++L   ++ +   P + +  G + PY
Sbjct: 648 FELSDPTKTALGAPANVNK-GRSYPY 672


>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
          Length = 829

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
 Frame = +2

Query: 125 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYW----- 289
           +D+  I   +D +N+  +D +     PK   +TA    P   D L     AI YW     
Sbjct: 584 YDIEGISKPLDWINVMTYDLHGTWE-PKTGHHTA--MGPDG-DKL-TLPFAIWYWMNNRD 638

Query: 290 ------IQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLS 451
                 I+NG P +K+VLG+ T GR + L+S            + G +AG YT  +G L+
Sbjct: 639 TWEKPGIRNGMPANKIVLGLGTYGRAFGLES----------AGNNGLDAGKYTGAKGFLA 688

Query: 452 YPEICAKLINPNQNGK 499
           Y EIC   +   +N K
Sbjct: 689 YFEICKMGLTVVENNK 704


>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
          Length = 184

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2

Query: 419 GPYTKVQGLLSYPEIC 466
           GPYT+  G LSY EIC
Sbjct: 16  GPYTRESGFLSYYEIC 31


>SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0)
          Length = 915

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 335 TTGRTWKLDSDSEISGVPPIHADXGGEAGPYT-KVQGLLSYPEI 463
           T G+TW      E  G+P + A  GG A P +  +  +LS  +I
Sbjct: 119 TAGKTWNASCFCEGRGMPLVGAVIGGAASPISLNIANVLSVNDI 162


>SB_17981| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1303

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
 Frame = +2

Query: 125 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 304
           +D+ +I+++VD + I A+D    +   KE     P  A  N  P       +  +++   
Sbjct: 171 YDLKAIVDIVDFMVIMAYD---QQSQIKE----GPCIAKAN-SPYSQTLEGVQQYLKLNI 222

Query: 305 PTHKLVLGISTTGRTW---KLDSDSEISGVPPIH------ADXGGEAGPYTKVQGLL 448
             +KLVLG+   G  +   ++D  ++I  +  +       +D  G   PY  V  LL
Sbjct: 223 SNNKLVLGLPWYGYDYPCEEIDEKNDICFIKKVPFRGVNCSDAAGTQIPYATVNDLL 279


>SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
          Length = 628

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 289 DSKWCAYPQTCPWYQHHWTYVEA 357
           D + C+YP T PW    WT + +
Sbjct: 80  DERNCSYPTTGPWTTRPWTPISS 102


>SB_3622| Best HMM Match : K167R (HMM E-Value=1.5)
          Length = 441

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = -1

Query: 223 SVVRLFGVTFRCII--VKCLDVDNVDQVYDAWDVKVNGAIYVWQNADN*LHIGFYIECLF 50
           SV   F  T + +I  + C DV+ V  + +   V VNG     QNA+  + + F +   F
Sbjct: 252 SVENRFSGTNKALIDAIVCQDVEEVKSILETEAVNVNG-----QNAEGFVPLEFAVMLGF 306

Query: 49  HLTYKSGEAF 20
           H   K  +AF
Sbjct: 307 HHIAKMLQAF 316


>SB_16588| Best HMM Match : Tropomyosin (HMM E-Value=3.3)
          Length = 430

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 232 LRTAEPRSSTKRRRCYKLLD-SKWCAYPQTCPWYQHHWTYVEAR 360
           LR + PRS  ++   +      K+ ++P   P  +HHWT  E R
Sbjct: 26  LRNSTPRSKARKPLQFTSPSHGKFKSFPVKSPVRRHHWTLEEER 69


>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
          Length = 942

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 262 KRRRCYKLLDSKWCAYPQTCP 324
           K  RCY L DSK C  P   P
Sbjct: 327 KAPRCYNLCDSKTCIIPTKAP 347


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,269,958
Number of Sequences: 59808
Number of extensions: 345454
Number of successful extensions: 889
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1123894172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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