Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_I11
(511 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 57 6e-09
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 57 8e-09
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 51 5e-07
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 50 9e-07
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 47 8e-06
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 47 8e-06
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 47 8e-06
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 44 6e-05
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 43 1e-04
At3g16460.2 68416.m02097 jacalin lectin family protein contains ... 31 0.60
At3g16460.1 68416.m02098 jacalin lectin family protein contains ... 31 0.60
At1g30220.1 68414.m03697 sugar transporter family protein simila... 29 1.4
At5g42390.1 68418.m05161 metalloendopeptidase identical to chlor... 29 2.4
At4g34350.1 68417.m04881 LytB family protein contains Pfam profi... 28 3.2
At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containi... 27 5.5
At1g50790.1 68414.m05712 hypothetical protein 27 5.5
At2g33570.1 68415.m04114 expressed protein 27 7.3
At5g17920.1 68418.m02101 5-methyltetrahydropteroyltriglutamate--... 27 9.7
At2g43330.1 68415.m05388 sugar transporter family protein simila... 27 9.7
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 57.2 bits (132), Expect = 6e-09
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Frame = +2
Query: 17 REGFTALVREMKQALNVKPNMQLVISVLPNVNS-SIYFDVPSIINLVDIVNIQAFDYYTP 193
RE +A+V E + KP + L +V + N S+ + V ++ + +D VN+ A+D+Y P
Sbjct: 156 REWRSAVVAEASSS--GKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGP 213
Query: 194 ERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 373
+ + A ++ P N P + DA WIQ G P K VLG G W+L + +
Sbjct: 214 GWS-RVTGPPAALFDPSNAGP--SGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANS 270
Query: 374 ISGVPP 391
S P
Sbjct: 271 HSYYAP 276
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 56.8 bits (131), Expect = 8e-09
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +2
Query: 44 EMKQALNVKPNMQLVISVL-PNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADY 220
E + + KP + L +V +V + + V + +D VNI A+D+Y P + K
Sbjct: 154 EAESRRSSKPTLLLTAAVYYSSVYKTFTYPVQVMRESLDWVNIIAYDFYGPVSSSKFTVP 213
Query: 221 TAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 373
TA ++ N + + D+ + WI++G P K VLG S G W L +D +
Sbjct: 214 TAGLHVSSNNEG-PSGDSGLKQWIKDGLPEKKAVLGFSYVGWAWTLQNDKD 263
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 50.8 bits (116), Expect = 5e-07
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
Frame = +2
Query: 20 EGFTALVREMKQALNV------KPNMQLVISVLPNVNS-SIYFDVPSIINLVDIVNIQAF 178
+ F L+RE + A+ KP + L +V + + S+ V ++ + +D VN+ A+
Sbjct: 147 DNFGKLLREWRLAVEAEARSSGKPRLLLTAAVFYSYSYYSVLHPVNAVADSLDWVNLVAY 206
Query: 179 DYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKL 358
D+Y + + AP+Y P P + DA + W Q G P K VLG G W L
Sbjct: 207 DFYE-SGSSRVTCSPAPLYDPITTGP--SGDAGVRAWTQAGLPAKKAVLGFPLYGYAWCL 263
Query: 359 DSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEI 463
+D++ H +GP G + Y +I
Sbjct: 264 -TDAK------NHNYYANSSGPAISPDGSIGYDQI 291
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 50.0 bits (114), Expect = 9e-07
Identities = 28/86 (32%), Positives = 47/86 (54%)
Frame = +2
Query: 125 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 304
+ V +I + +D VNI A+D+Y P +P A ++ P N ++ D+ ++ W++
Sbjct: 179 YPVQAIADNLDFVNIMAYDFYGPGWSPVTGP-PAALFDPSNPAG-RSGDSGLSKWLEAKL 236
Query: 305 PTHKLVLGISTTGRTWKLDSDSEISG 382
P K VLG S G W L+ D+E +G
Sbjct: 237 PAKKAVLGFSYCGWAWTLE-DAENNG 261
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 46.8 bits (106), Expect = 8e-06
Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Frame = +2
Query: 2 KESEHREGFTALVREMKQALNVKPNMQLVISVLPNVN---SSIYFDVP----SIINLVDI 160
+ E F L+ E + A+ + N +++ SS Y VP +I N +D
Sbjct: 122 RNEEEMYDFGKLLEEWRSAVEAESNSSGTTALILTAAVYYSSNYQGVPYPVLAISNSLDW 181
Query: 161 VNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTT 340
+N+ A+D+Y P + A +Y P + ++ D+ + W + G P K VLG
Sbjct: 182 INLMAYDFYGPGWSTVTGP-PASLYLPTDG---RSGDSGVRDWTEAGLPAKKAVLGFPYY 237
Query: 341 GRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEI 463
G W L +D +++G GP G +SY ++
Sbjct: 238 GWAWTL-ADPDVNGY------DANTTGPAISDDGEISYRQL 271
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 46.8 bits (106), Expect = 8e-06
Identities = 36/120 (30%), Positives = 49/120 (40%)
Frame = +2
Query: 104 NVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAIN 283
N N +Y V I L+D VNI+A+D+Y P + T P A + + D+ +
Sbjct: 77 NYNGVVY-PVKFISELLDWVNIKAYDFY----GPGCTEVTGPPAALYLQSDGPSGDSGVK 131
Query: 284 YWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEI 463
WI G P K VLG G W L P H GP G +SY ++
Sbjct: 132 DWIDAGLPAEKAVLGFPYYGWAWTLAD-------PKNHGYYVDTTGPAISDDGEISYSQL 184
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 46.8 bits (106), Expect = 8e-06
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +2
Query: 53 QALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYY--TPERNPKEADYTA 226
Q ++P + + +S+ + V +I +D VN+ A+++Y T E P A
Sbjct: 137 QRTGIRPLLLTAAVYYTSDYNSVSYPVQAINRSLDWVNLIAYEFYGLTTEIGPP-----A 191
Query: 227 PIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 373
+Y P + P D + +W++ G P K V G G +W LD D +
Sbjct: 192 GLYDPSIKGPC--GDTGLKHWLKAGLPEKKAVFGFPYVGWSWTLDDDKD 238
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 44.0 bits (99), Expect = 6e-05
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Frame = +2
Query: 20 EGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPER 199
E + A V E N P + + + V +I + +D VNI A+D+Y P
Sbjct: 152 EEWRAAVVEESDKTNQLPLLLTAAVYYSPQYDGVEYPVKAIADNLDFVNIMAYDFYGPGW 211
Query: 200 NPKEADYTAPIYAPQNRDPLQNADAAINYWIQNG-APTHKLVLGISTTGRTWKLDSDSEI 376
+P A + P N ++ ++ + W+ P K VLG G W L+ D+E
Sbjct: 212 SPVTGPPAALFHDPSN-PAGRSGNSGLRKWLDEAKLPPKKAVLGFPYCGWAWTLE-DAEN 269
Query: 377 SG 382
+G
Sbjct: 270 NG 271
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 107 VNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQN-RDPLQNADAAIN 283
V S+ + + I +D VN+ A+D+Y+ A ++ P N + P D +
Sbjct: 174 VYDSVSYPIREIKKKLDWVNLIAYDFYSSSTT---IGPPAALFDPSNPKGPC--GDYGLK 228
Query: 284 YWIQNGAPTHKLVLGISTTGRTWKLDSDSE 373
WI+ G P K VLG G TW L S ++
Sbjct: 229 EWIKAGLPAKKAVLGFPYVGWTWSLGSGND 258
>At3g16460.2 68416.m02097 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 647
Score = 30.7 bits (66), Expect = 0.60
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 299 GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTK 433
G+ KL G ST G +W D S+ GV I+A GGE Y K
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVK 292
>At3g16460.1 68416.m02098 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 705
Score = 30.7 bits (66), Expect = 0.60
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 299 GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTK 433
G+ KL G ST G +W D S+ GV I+A GGE Y K
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVK 292
>At1g30220.1 68414.m03697 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 580
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 252 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 362
++Y +PT++ + GF R LSLV+A L+ GS I
Sbjct: 294 VMYYSPTIVQLAGFASNRTALLLSLVTAGLNAFGSII 330
>At5g42390.1 68418.m05161 metalloendopeptidase identical to
chloroplast processing enzyme metalloendopeptidase
[Arabidopsis thaliana] gi|2827039|gb|AAC39482
Length = 1265
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -1
Query: 181 VKCLDVDNVDQVYDAWDVKVNGAIYVWQNADN*LHIGFYIECLF 50
+K DVD + + ++ W N +Y+ + DN I IE +F
Sbjct: 358 IKKWDVDKIRKFHERWYFPANATLYIVGDIDNIPRIVHNIEAVF 401
>At4g34350.1 68417.m04881 LytB family protein contains Pfam profile:
PF02401 LytB protein
Length = 466
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +2
Query: 317 LVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAGPYTKVQGLLSYPEICAK 472
LV+G + T L SE G+P D GP K+ L Y E+ K
Sbjct: 372 LVVGGWNSSNTSHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEK 423
>At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 888
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 11 EHREGFTALVREMKQALNVKPNMQLVISVLPNVNS 115
EH T+ +R+ + AL+V PN Q ++ + VNS
Sbjct: 851 EHIGDVTSALRDCRAALSVDPNHQEMLELHSRVNS 885
>At1g50790.1 68414.m05712 hypothetical protein
Length = 812
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/73 (20%), Positives = 32/73 (43%)
Frame = +2
Query: 71 PNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNR 250
P ++++PN + + I + +V I + ++Y P R + ++ P NR
Sbjct: 339 PEKATWVTLVPNRDDE-FISFARCIMVSQLVGIDSLEHYYPNRVASQFGRLQDVHCPVNR 397
Query: 251 DPLQNADAAINYW 289
+ L A +Y+
Sbjct: 398 NNLSREAAWNDYY 410
>At2g33570.1 68415.m04114 expressed protein
Length = 496
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 263 FVEDRGSAVRKSVQCSPPLWGYVQVYNSQMPGC 165
++ + G+++R Q P WGY +VY + C
Sbjct: 147 WISNNGTSIRAKAQKILPDWGYGRVYTVVVVNC 179
>At5g17920.1 68418.m02101
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase / vitamin-B12-independent methionine
synthase / cobalamin-independent methionine synthase
(CIMS) identical to SP|O50008
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent
methionine synthase isozyme) (Cobalamin-independent
methionine synthase isozyme) {Arabidopsis thaliana}
Length = 765
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 263 NADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADXGGEAG 421
+AD + W Q A K + + LD+ + + VPP + GGE G
Sbjct: 38 SADLRSSIWKQMSAAGTKFIPSNTFAHYDQVLDTTAMLGAVPPRYGYTGGEIG 90
>At2g43330.1 68415.m05388 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens], SP|Q01440 Membrane transporter D1
{Leishmania donovani}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 509
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +3
Query: 252 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 362
++Y +PT++ + GF +L LSL+ A ++ G+ +
Sbjct: 294 VMYYSPTIVQMAGFHSNQLALFLSLIVAAMNAAGTVV 330
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,461,356
Number of Sequences: 28952
Number of extensions: 240930
Number of successful extensions: 682
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 917929344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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