BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_I10 (386 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_03_1452 - 30255093-30255460,30255593-30255777,30255866-302562... 29 1.7 10_01_0211 - 2268191-2268247,2268916-2268944,2270892-2271777 28 2.2 08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 27 5.2 >06_03_1452 - 30255093-30255460,30255593-30255777,30255866-30256281, 30256726-30256934,30257542-30257700,30257792-30257810 Length = 451 Score = 28.7 bits (61), Expect = 1.7 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +3 Query: 129 KRISFVFCIHSNMESCSYRDMCDTTGRD*QLCLAVQLLGTFNGF 260 K +F++C+H S DM D + Q C V G F+G+ Sbjct: 122 KATTFLYCVHCGFMKNSGADMDDVDVKYIQKCKFVVASGIFDGY 165 >10_01_0211 - 2268191-2268247,2268916-2268944,2270892-2271777 Length = 323 Score = 28.3 bits (60), Expect = 2.2 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = -3 Query: 234 VQRDTIASRAQWCHTCLCKNMTPY*SEYKTQN*SFSHFGSQNTFLTTV 91 +Q D++ SR W T + ++ PY S Y N FG + LT + Sbjct: 267 LQIDSLQSRKLW-ETNIMSSLHPYASTYVAANYGLRKFGKVSRLLTVI 313 >08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 Length = 533 Score = 27.1 bits (57), Expect = 5.2 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1 Query: 169 SHVLTETCVTPLGATSNCVSLYSCSELLTAFDQRPLQSSVVSFL 300 +HVL + + + AT ++ YSCS A + S V S++ Sbjct: 448 AHVLRDHAIRQVDATQLQITCYSCSHKFRARAAAMISSDVASYV 491 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,242,597 Number of Sequences: 37544 Number of extensions: 161813 Number of successful extensions: 338 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 336 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 338 length of database: 14,793,348 effective HSP length: 74 effective length of database: 12,015,092 effective search space used: 648814968 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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