Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_I10
         (386 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ020202-1|AAY26396.1|  758|Homo sapiens oxidation resistance 1 ...    29   4.0  
BC032710-1|AAH32710.1|  758|Homo sapiens oxidation resistance 1 ...    29   4.0  
BC019691-1|AAH19691.1|  400|Homo sapiens Unknown (protein for IM...    29   4.0  
AK124441-1|BAC85852.1|  477|Homo sapiens protein ( Homo sapiens ...    29   4.0  
AK096148-1|BAC04711.1|  503|Homo sapiens protein ( Homo sapiens ...    29   4.0  

>DQ020202-1|AAY26396.1|  758|Homo sapiens oxidation resistance 1
           protein.
          Length = 758

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -1

Query: 248 SSEQLYSETQLLVAPSGVTHVSVRT*LHIRVNTKHKTNPFPILDHKT 108
           SSE + +  Q  V    V   S  T  H+R +T+H TN    L HKT
Sbjct: 278 SSESVQTVNQAEVESLTVKSESTGTPGHLRSDTEHSTNEVGTLCHKT 324


>BC032710-1|AAH32710.1|  758|Homo sapiens oxidation resistance 1
           protein.
          Length = 758

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -1

Query: 248 SSEQLYSETQLLVAPSGVTHVSVRT*LHIRVNTKHKTNPFPILDHKT 108
           SSE + +  Q  V    V   S  T  H+R +T+H TN    L HKT
Sbjct: 278 SSESVQTVNQAEVESLTVKSESTGTPGHLRSDTEHSTNEVGTLCHKT 324


>BC019691-1|AAH19691.1|  400|Homo sapiens Unknown (protein for
           IMAGE:4475675) protein.
          Length = 400

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -1

Query: 248 SSEQLYSETQLLVAPSGVTHVSVRT*LHIRVNTKHKTNPFPILDHKT 108
           SSE + +  Q  V    V   S  T  H+R +T+H TN    L HKT
Sbjct: 278 SSESVQTVNQAEVESLTVKSESTGTPGHLRSDTEHSTNEVGTLCHKT 324


>AK124441-1|BAC85852.1|  477|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42450 fis, clone BRACE2010489, moderately
           similar to Mus musculus nucleolar protein C7 mRNA. ).
          Length = 477

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -1

Query: 248 SSEQLYSETQLLVAPSGVTHVSVRT*LHIRVNTKHKTNPFPILDHKT 108
           SSE + +  Q  V    V   S  T  H+R +T+H TN    L HKT
Sbjct: 366 SSESVQTVNQAEVESLTVKSESTGTPGHLRSDTEHSTNEVGTLCHKT 412


>AK096148-1|BAC04711.1|  503|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38829 fis, clone MAMGL1000083, weakly similar to
           Drosophila melanogaster L82B (L82) mRNA. ).
          Length = 503

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -1

Query: 248 SSEQLYSETQLLVAPSGVTHVSVRT*LHIRVNTKHKTNPFPILDHKT 108
           SSE + +  Q  V    V   S  T  H+R +T+H TN    L HKT
Sbjct: 299 SSESVQTVNQAEVESLTVKSESTGTPGHLRSDTEHSTNEVGTLCHKT 345


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,851,378
Number of Sequences: 237096
Number of extensions: 946852
Number of successful extensions: 1637
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)