Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_I10
         (386 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66512-9|CAA91328.3|  253|Caenorhabditis elegans Hypothetical pr...    28   2.6  
Z48638-12|CAA88573.3|  253|Caenorhabditis elegans Hypothetical p...    28   2.6  
AC006682-2|AAF39957.1|  370|Caenorhabditis elegans Hypothetical ...    28   2.6  
Z81122-11|CAB61031.1|  447|Caenorhabditis elegans Hypothetical p...    27   4.6  
AF114440-1|AAD13294.1|  447|Caenorhabditis elegans delta5-fatty ...    27   4.6  
AF078796-1|AAC95143.1|  447|Caenorhabditis elegans delta 5 fatty...    27   4.6  
Z72502-12|CAI46558.2|  303|Caenorhabditis elegans Hypothetical p...    27   6.1  
AC084152-9|AAK39313.1|  296|Caenorhabditis elegans Hypothetical ...    27   6.1  

>Z66512-9|CAA91328.3|  253|Caenorhabditis elegans Hypothetical
           protein ZK892.5 protein.
          Length = 253

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 306 LPEETDDATLKRSLIKSR*KFRATVQRDTIASRAQWCHT 190
           L E  +DAT  R LI+ R  +   V    I +  QWC T
Sbjct: 4   LKEYPEDATEIRELIERRRHYLNVVSATAILATFQWCTT 42


>Z48638-12|CAA88573.3|  253|Caenorhabditis elegans Hypothetical
           protein ZK892.5 protein.
          Length = 253

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 306 LPEETDDATLKRSLIKSR*KFRATVQRDTIASRAQWCHT 190
           L E  +DAT  R LI+ R  +   V    I +  QWC T
Sbjct: 4   LKEYPEDATEIRELIERRRHYLNVVSATAILATFQWCTT 42


>AC006682-2|AAF39957.1|  370|Caenorhabditis elegans Hypothetical
           protein R193.3 protein.
          Length = 370

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +1

Query: 166 WSHVLTETCVTPLGATSNCVSLYSCSELLTAFDQRPLQSSV-VSFL-RQSQCGFE 324
           WS +  E C TP G     V  Y   +  ++FD +    +V + FL ++  C FE
Sbjct: 278 WSQI--EKCATPAGIFDQLVKEYPHVDWFSSFDMKDCGENVLLEFLEKKIACSFE 330


>Z81122-11|CAB61031.1|  447|Caenorhabditis elegans Hypothetical
           protein T13F2.1 protein.
          Length = 447

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +1

Query: 136 LVLCFVFTLIWSHVLT--ETCVTPLGATSNCVSLYSCSELLTAFDQRP 273
           LV   V   + SHV+T     V     +SN +S Y+C +++T  + RP
Sbjct: 323 LVSHLVGGFLLSHVVTFNHYSVEKFALSSNIMSNYACLQIMTTRNMRP 370


>AF114440-1|AAD13294.1|  447|Caenorhabditis elegans delta5-fatty
           acid desaturase protein.
          Length = 447

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +1

Query: 136 LVLCFVFTLIWSHVLT--ETCVTPLGATSNCVSLYSCSELLTAFDQRP 273
           LV   V   + SHV+T     V     +SN +S Y+C +++T  + RP
Sbjct: 323 LVSHLVGGFLLSHVVTFNHYSVEKFALSSNIMSNYACLQIMTTRNMRP 370


>AF078796-1|AAC95143.1|  447|Caenorhabditis elegans delta 5 fatty
           acid desaturase protein.
          Length = 447

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +1

Query: 136 LVLCFVFTLIWSHVLT--ETCVTPLGATSNCVSLYSCSELLTAFDQRP 273
           LV   V   + SHV+T     V     +SN +S Y+C +++T  + RP
Sbjct: 323 LVSHLVGGFLLSHVVTFNHYSVEKFALSSNIMSNYACLQIMTTRNMRP 370


>Z72502-12|CAI46558.2|  303|Caenorhabditis elegans Hypothetical
           protein C08B6.13 protein.
          Length = 303

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 95  VVKKVFCDPKWEKD 136
           V++ +FCDPKW K+
Sbjct: 284 VLRTIFCDPKWLKN 297


>AC084152-9|AAK39313.1|  296|Caenorhabditis elegans Hypothetical
           protein Y102A11A.1 protein.
          Length = 296

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -1

Query: 242 EQLYSETQLLVAPSGVTHVSVRT*LHIRVNTKHKTNPFPILD 117
           +QLY  +  ++ PSGV H+++ T + +    +  T   PI+D
Sbjct: 235 QQLYPASSAIMQPSGVIHLNLYT-IQLPNGHQTYTTSSPIID 275


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,207,527
Number of Sequences: 27780
Number of extensions: 153381
Number of successful extensions: 382
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)