Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_I09
(469 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical pr... 34 0.058
AL590342-3|CAC35860.1| 421|Caenorhabditis elegans Hypothetical ... 28 2.9
AL032622-5|CAA21500.1| 421|Caenorhabditis elegans Y66A7A.6 prot... 28 2.9
AF031842-1|AAC13678.1| 421|Caenorhabditis elegans GLY8 protein. 28 2.9
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 27 5.1
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 27 5.1
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 27 5.1
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 27 5.1
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 27 5.1
>Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical
protein F21C3.2 protein.
Length = 813
Score = 33.9 bits (74), Expect = 0.058
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +3
Query: 126 DNDNIGVEGYSYAVETSDGKQAQETGQLKNVGTENEAISVRGQFSYVGLDGVTYTVTY 299
+++N + G +A ++ + +E G L + +N S+R QF+ +GL+ +T + Y
Sbjct: 78 EDENFNINGNHFARNSTPSEHHEEIGNLCHDNQQN-CKSIREQFTKIGLENITKMIRY 134
>AL590342-3|CAC35860.1| 421|Caenorhabditis elegans Hypothetical
protein Y66A7A.6 protein.
Length = 421
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 65 KSEYDEGFHF*WVFLRWGY 9
KS +D GF F W++L W Y
Sbjct: 249 KSGFDWGFTFKWIYLPWEY 267
>AL032622-5|CAA21500.1| 421|Caenorhabditis elegans Y66A7A.6
protein.
Length = 421
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 65 KSEYDEGFHF*WVFLRWGY 9
KS +D GF F W++L W Y
Sbjct: 249 KSGFDWGFTFKWIYLPWEY 267
>AF031842-1|AAC13678.1| 421|Caenorhabditis elegans GLY8 protein.
Length = 421
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 65 KSEYDEGFHF*WVFLRWGY 9
KS +D GF F W++L W Y
Sbjct: 249 KSGFDWGFTFKWIYLPWEY 267
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 90 PLESKDATIVRYDNDNIGVEGYSYAVETSD 179
PLE+ DA + + D G G AVETS+
Sbjct: 4487 PLETDDAIVAKNPFDTPGAPGQPEAVETSE 4516
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 90 PLESKDATIVRYDNDNIGVEGYSYAVETSD 179
PLE+ DA + + D G G AVETS+
Sbjct: 5016 PLETDDAIVAKNPFDTPGAPGQPEAVETSE 5045
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 90 PLESKDATIVRYDNDNIGVEGYSYAVETSD 179
PLE+ DA + + D G G AVETS+
Sbjct: 4697 PLETDDAIVAKNPFDTPGAPGQPEAVETSE 4726
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 90 PLESKDATIVRYDNDNIGVEGYSYAVETSD 179
PLE+ DA + + D G G AVETS+
Sbjct: 4487 PLETDDAIVAKNPFDTPGAPGQPEAVETSE 4516
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 90 PLESKDATIVRYDNDNIGVEGYSYAVETSD 179
PLE+ DA + + D G G AVETS+
Sbjct: 5016 PLETDDAIVAKNPFDTPGAPGQPEAVETSE 5045
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 90 PLESKDATIVRYDNDNIGVEGYSYAVETSD 179
PLE+ DA + + D G G AVETS+
Sbjct: 4697 PLETDDAIVAKNPFDTPGAPGQPEAVETSE 4726
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 90 PLESKDATIVRYDNDNIGVEGYSYAVETSD 179
PLE+ DA + + D G G AVETS+
Sbjct: 3906 PLETDDAIVAKNPFDTPGAPGQPEAVETSE 3935
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,989,958
Number of Sequences: 27780
Number of extensions: 114451
Number of successful extensions: 327
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -