Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_I08
(442 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 229 2e-59
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 227 1e-58
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 223 1e-57
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 184 7e-46
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 183 2e-45
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 175 3e-43
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 169 3e-41
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 151 5e-36
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 151 6e-36
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 139 3e-32
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 138 4e-32
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 122 3e-27
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 121 8e-27
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 100 2e-20
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 97 1e-19
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 79 3e-14
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 60 2e-08
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 57 2e-07
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 54 1e-06
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 53 2e-06
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 53 2e-06
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 53 3e-06
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 52 5e-06
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 52 7e-06
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 51 1e-05
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 50 2e-05
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 45 8e-04
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 44 0.001
UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 44 0.001
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 44 0.001
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 42 0.006
UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8; Euryarc... 41 0.014
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 40 0.018
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 40 0.024
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 37 0.22
UniRef50_Q5DFQ5 Cluster: SJCHGC04650 protein; n=1; Schistosoma j... 36 0.29
UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;... 35 0.67
UniRef50_Q2H164 Cluster: Putative uncharacterized protein; n=1; ... 33 2.7
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 33 3.6
UniRef50_Q4PGL6 Cluster: Putative uncharacterized protein; n=1; ... 32 4.7
UniRef50_Q8YQA8 Cluster: Alr3925 protein; n=5; Nostocaceae|Rep: ... 32 6.3
UniRef50_A5N0X0 Cluster: Putative uncharacterized protein; n=1; ... 32 6.3
UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4; Actin... 32 6.3
UniRef50_Q6NZL8 Cluster: Signal peptide, CUB and EGF-like domain... 32 6.3
UniRef50_Q60BZ5 Cluster: Selenium-binding family protein; n=4; P... 31 8.3
UniRef50_A7TEH8 Cluster: Putative uncharacterized protein; n=1; ... 31 8.3
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 229 bits (561), Expect = 2e-59
Identities = 109/142 (76%), Positives = 124/142 (87%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPMKQGVLT+ RVRLL+SKGHSC + + G+RKRKSVRGCIVDANLSVL LVIV+KG +
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPR-RTGERKRKSVRGCIVDANLSVLNLVIVKKGEK 119
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
+IPGLTD VPRRLGPKRAS+I
Sbjct: 120 DIPGLTDTTVPRRLGPKRASRI 141
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 227 bits (554), Expect = 1e-58
Identities = 106/142 (74%), Positives = 123/142 (86%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPMKQGVLTN+RVRLL+ KGHSC + + G+RKRKSVRGCIVD NLS LAL++V+KG +
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYRPR-RTGERKRKSVRGCIVDQNLSALALIVVKKGEK 119
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
+IPGLTD V RRLGPKRAS I
Sbjct: 120 DIPGLTDTTVLRRLGPKRASNI 141
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 223 bits (545), Expect = 1e-57
Identities = 101/142 (71%), Positives = 118/142 (83%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPMKQG++TN RVRLL+SKGHSC + + G+RKRKSVRGCIVD+ LSVL+LVIV+KG Q
Sbjct: 61 FPMKQGIMTNGRVRLLLSKGHSCYRPR-RTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQ 119
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
+IPGLTD +PRRLGPKR KI
Sbjct: 120 DIPGLTDNTIPRRLGPKRVGKI 141
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 184 bits (448), Expect = 7e-46
Identities = 88/142 (61%), Positives = 107/142 (75%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MK N+SYP TG QK E+ D+ K IF +K+MG EV+ D LGDE+KGYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPMKQGV+ RVRLL+S+GHSC T +G RKRKSVRGCIV ++ VLAL IV+KG
Sbjct: 61 FPMKQGVMVRGRVRLLLSEGHSC-FTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVA 119
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
EI GLT +PR+LGPKRA+ I
Sbjct: 120 EIDGLTTVTLPRKLGPKRANNI 141
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 183 bits (445), Expect = 2e-45
Identities = 86/142 (60%), Positives = 109/142 (76%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MK N+SYP TG QK E+ D+ K IF++KRMG V+AD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPM+QGVL RVR+LM KGH + + +G+ KRKS+RGCIV ++ VLAL +V+KGA
Sbjct: 61 FPMRQGVLFKGRVRILMRKGHKGYRPR-KDGEMKRKSIRGCIVGQDIRVLALQVVKKGAN 119
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
EI GLTD VPRRLGPKR +K+
Sbjct: 120 EIAGLTDQNVPRRLGPKRLTKL 141
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 175 bits (427), Expect = 3e-43
Identities = 92/142 (64%), Positives = 106/142 (74%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPMKQGVLT+ R+RLL K HSC + N RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPR-CNKVRKCKTVRKYTVEANVSALTLVVLKKNPS 118
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
P RLGP R+S I
Sbjct: 119 ----------PCRLGPVRSSNI 130
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 169 bits (410), Expect = 3e-41
Identities = 84/145 (57%), Positives = 103/145 (71%)
Frame = +3
Query: 6 IAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGND 185
I MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGND
Sbjct: 39 IQKMKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGND 98
Query: 186 KQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRK 365
KQGFPM QGVLTN+RVRLL KG C + + G+++RKSVRGCIV +LS L L +V+K
Sbjct: 99 KQGFPMMQGVLTNNRVRLLFKKGMKCYRPR-KKGEKRRKSVRGCIVGQDLSALNLTLVKK 157
Query: 366 GAQEIPGLTDGEVPRRLGPKRASKI 440
G EIPGLTD V ++LGPKRA+KI
Sbjct: 158 GTNEIPGLTDKAVGKKLGPKRATKI 182
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 151 bits (367), Expect = 5e-36
Identities = 69/142 (48%), Positives = 100/142 (70%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
M++ ++YP G Q + ++ D L YEKR+G +++ + LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPMKQGV+T R+RLL+ G SC + + +G+RKRK+VRGCI+ +S L V+++KG +
Sbjct: 61 FPMKQGVITPRRIRLLLKTGASCYRPR-KDGERKRKTVRGCIISDEISALHCVVLQKGEK 119
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
EI GLT VPRR GPKRAS +
Sbjct: 120 EIDGLTTTAVPRRFGPKRASTL 141
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 151 bits (366), Expect = 6e-36
Identities = 73/139 (52%), Positives = 99/139 (71%)
Frame = +3
Query: 18 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGF 197
K+NV+YPATG K F+ +E R F +KR+G EVDA LGDE+KGY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 198 PMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQE 377
PM GV TN+RVRLL+ + C + NG+R+RK+VRG IV ++SVL ++V+KG E
Sbjct: 61 PMMTGVATNNRVRLLLDGRNGC-YKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGE 119
Query: 378 IPGLTDGEVPRRLGPKRAS 434
I G+T+ +P R GP+RAS
Sbjct: 120 IEGVTNDALPMRAGPQRAS 138
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 139 bits (336), Expect = 3e-32
Identities = 70/141 (49%), Positives = 91/141 (64%)
Frame = +3
Query: 18 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGF 197
K+N+S P TG K + D K + + RM +E D LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 198 PMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQE 377
PM QGVL + R RLL+ +G C NG+RKRKS+RGCIV +L L++V+V G +
Sbjct: 68 PMYQGVLKSQRARLLLRQGAKC-YLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKT 126
Query: 378 IPGLTDGEVPRRLGPKRASKI 440
+PGLTD VP+RL PKRASKI
Sbjct: 127 LPGLTDVVVPKRLVPKRASKI 147
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 138 bits (335), Expect = 4e-32
Identities = 69/144 (47%), Positives = 98/144 (68%), Gaps = 2/144 (1%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQ 191
MKLN++YP G K FE+ DE R+ + R+G EVD + G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 192 GFPMKQGVLTNSRVRLLMSKGHSC*QT-KVVNGKRKRKSVRGCIVDANLSVLALVIVRKG 368
GFPM GVL +SRV LL+ +G T + G+R+RK+VRGC++ ++++++ + I + G
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120
Query: 369 AQEIPGLTDGEVPRRLGPKRASKI 440
Q I G+TD PRRLGPKRASKI
Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKI 144
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 122 bits (295), Expect = 3e-27
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 195 FPMKQGVLTNSRVRLLM 245
FPMKQ VLT+ R+ LL+
Sbjct: 61 FPMKQDVLTHDRIHLLL 77
Score = 36.3 bits (80), Expect = 0.29
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 372 QEIPGLTDGEVPRRLGPKRASKI 440
++IPGLTD PR +GPKRAS+I
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRI 102
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 121 bits (291), Expect = 8e-27
Identities = 59/143 (41%), Positives = 92/143 (64%), Gaps = 1/143 (0%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MK N++ P+TG Q E+ DE KLRI Y K++ +++D ++G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHS-C*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGA 371
FPMK+G+L+ SRV++L+ KG + C K+ G+R RKSVRGCIV +SVL + ++
Sbjct: 61 FPMKEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKLLTNKN 120
Query: 372 QEIPGLTDGEVPRRLGPKRASKI 440
++ +T+ + L KR+S +
Sbjct: 121 DDLL-ITNKNSEKTLTHKRSSNL 142
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 100 bits (239), Expect = 2e-20
Identities = 50/113 (44%), Positives = 78/113 (69%)
Frame = +3
Query: 57 LFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 236
+FE+ +++R+ Y+K++G + D +LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 237 LLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 395
L+SKG + + + G R+RKSVRG IV + VL L+I+R G +EI GLT+
Sbjct: 60 PLLSKGDAGYRCR-RKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTN 111
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 97.1 bits (231), Expect = 1e-19
Identities = 52/92 (56%), Positives = 64/92 (69%)
Frame = +3
Query: 165 RVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVL 344
R GGNDKQG VL RVR+LM KGH + + +G+ KRKS+RGCIV ++ VL
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPRK-DGEMKRKSIRGCIVGQDIRVL 114
Query: 345 ALVIVRKGAQEIPGLTDGEVPRRLGPKRASKI 440
AL +V+KGA EI GLTD VPRRLGPKR +K+
Sbjct: 115 ALQVVKKGANEIAGLTDQNVPRRLGPKRLTKL 146
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.4 bits (187), Expect = 3e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWK 152
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 60.1 bits (139), Expect = 2e-08
Identities = 34/92 (36%), Positives = 54/92 (58%)
Frame = +3
Query: 105 RMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVVN 284
++G E + +LG KGY LR+ GG+DK GFPMK+ V R + L++ G TK
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVNGGTGFKPTK--K 85
Query: 285 GKRKRKSVRGCIVDANLSVLALVIVRKGAQEI 380
G R+RK+VRG + ++S + + + +G Q +
Sbjct: 86 GLRRRKTVRGNTIADDISQINVKVSERGEQTL 117
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 56.8 bits (131), Expect = 2e-07
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Frame = -3
Query: 431 RTLGT*TAGNFTVSQSRNFLCTFADNDQG*D*KVSINNATTNRLAFPLTVHD-LGLLARV 255
RTL T +F + ++R+ DNDQ V ++ATT RLA T+ + A
Sbjct: 114 RTLRTTETRHFGIGEARDVGVALLDNDQVQHGNVLGDDATTARLASAFTLASAVAAEAAR 173
Query: 254 AF*HQETYTAVSQDSLFHREALLVVTAGNTENITFPFV 141
A H++ +T V Q +L H EALLVVT + E+++ PF+
Sbjct: 174 ALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 54.0 bits (124), Expect = 1e-06
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MK+N++ P G Q + DE I K +G ++ +LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVV-NGKRKRKSVRGCIVDANLSVLALVIVRKGA 371
F +K+ + T R+++ + KG ++ K+++VRG I+ + +S + LV +
Sbjct: 60 FLLKKNLNTFERLKINVKKGSLGNRSHFKRKNLTKKRTVRGGILSSEISSINLVKLPNNV 119
Query: 372 QE 377
+E
Sbjct: 120 KE 121
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 53.2 bits (122), Expect = 2e-06
Identities = 44/132 (33%), Positives = 65/132 (49%)
Frame = +3
Query: 18 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGF 197
KLN+S+ Q L EV + KLR FYEK M E+ + +E N + F
Sbjct: 2 KLNISFLLIVYQILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIF 50
Query: 198 PMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQE 377
MKQ VL + RV LL++ HS + + S++ V +S+L +VI+ G ++
Sbjct: 51 SMKQEVLIHFRVHLLLNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVIIINGRKD 109
Query: 378 IPGLTDGEVPRR 413
IPG T P+R
Sbjct: 110 IPGQTKRWAPKR 121
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 53.2 bits (122), Expect = 2e-06
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Frame = +3
Query: 6 IAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDA--------DLLGDEWKGYV 161
+A KL +S P +G K E+ ++ KR+G ++ A +L G E+ V
Sbjct: 1 MATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDV 59
Query: 162 -LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRG 314
L + GG DK GFPM+ + RVR+L+SKG + G+R++K+VRG
Sbjct: 60 KLEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPGFRPKE--KGERRKKTVRG 109
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 52.8 bits (121), Expect = 3e-06
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Frame = +3
Query: 27 VSYPATG--CQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFP 200
+S P TG QK+ E + ++L K++G + ++ D Y L++ GG D+ GFP
Sbjct: 7 ISDPKTGRAYQKVVEGANANRL---IGKQIGDVISGTIV-DLPPDYELKITGGTDRDGFP 62
Query: 201 MKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKG 368
M+ + +R RLL+S G + G RKRK VRG ++ ++ + V+V+ G
Sbjct: 63 MRPDLPGTARRRLLLSGGVGFRPKE--KGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 52.0 bits (119), Expect = 5e-06
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +3
Query: 54 KLFEV-VDEHKLRIFYEKRMGAEVDADLLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 227
K F++ ++ R F KR+G V A +LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 228 RVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRK 365
+ R L+S + G+R+RK+VRG + ++ + IV++
Sbjct: 193 KKRALLSGPPGFWPRE--KGERRRKTVRGNTISEDIVQINTKIVKQ 236
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 51.6 bits (118), Expect = 7e-06
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Frame = +3
Query: 6 IAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDA--------DLLGDEWKGYV 161
+A KL +S P G K E+ ++ +R+G E+ A ++ G+E
Sbjct: 1 MATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADA 59
Query: 162 -LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLS 338
L++ GG DK GFPM+ V RV++L+S+G + G+R++K+V G + N+
Sbjct: 60 KLKITGGTDKDGFPMRPDVHGPRRVKILLSRGPGFRPRE--RGERRKKTVHGNTISPNIV 117
Query: 339 VLALVIV 359
+ + IV
Sbjct: 118 QVNMKIV 124
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/95 (27%), Positives = 54/95 (56%)
Frame = +3
Query: 102 KRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVV 281
K++G E+ ++ E +GY L++ GG+D+ GF M+ + ++R+L+ +G
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPG--YNVKE 83
Query: 282 NGKRKRKSVRGCIVDANLSVLALVIVRKGAQEIPG 386
G R+RKS+RG + +++++ +V G+ + G
Sbjct: 84 KGLRRRKSLRGNTISKDITLINTKVVEYGSAPLGG 118
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 50.4 bits (115), Expect = 2e-05
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Frame = +3
Query: 6 IAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGND 185
+A ++ V+ P +G FEV D F + +GA VD +G + GY + + GG+D
Sbjct: 1 MATFQVAVADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSD 57
Query: 186 KQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRK 365
G PM++ V + + +L+ G + +G+RKR +VRG V ++ L + I
Sbjct: 58 DAGRPMREDVDGSDLMEVLLEGGAGFNPDE--DGERKRVTVRGKEVSEAVAQLNVAIDEH 115
Query: 366 GAQEIPGL--TDGE 401
G + + L DG+
Sbjct: 116 GEEPVAELLGADGD 129
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 44.8 bits (101), Expect = 8e-04
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = +3
Query: 102 KRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVV 281
K++G EVDA LG GY + + GG+D+ G P ++ + R +LL+++G V+
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAEGVGF--HPVM 87
Query: 282 NGKRKRKSVR 311
G+RKRK +R
Sbjct: 88 EGERKRKMIR 97
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 44.4 bits (100), Expect = 0.001
Identities = 28/69 (40%), Positives = 39/69 (56%)
Frame = +3
Query: 108 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVVNG 287
+G+E DA LG E K +R+ GG+DK G PM+ V +R +L+S+G + G
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVGLRDAE--RG 93
Query: 288 KRKRKSVRG 314
R RK VRG
Sbjct: 94 GRTRKLVRG 102
>UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5;
Thermoplasmatales|Rep: 30S ribosomal protein S6e -
Thermoplasma volcanium
Length = 128
Score = 44.4 bits (100), Expect = 0.001
Identities = 34/125 (27%), Positives = 63/125 (50%)
Frame = +3
Query: 27 VSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMK 206
++ P TG E+ E ++ +++G EVD + GY +++ GG+ GF M+
Sbjct: 8 IADPKTGKTYKREIPSE-RMSSLIGRKIGEEVDGVFF--DLVGYKMKITGGSSVDGFAMR 64
Query: 207 QGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQEIPG 386
+ T + ++L+ K S + K NG RKR + RG I+ ++++ + L I + G I
Sbjct: 65 PDLQTQGKKQILV-KYTSGYRGK--NGIRKRITARGSIIGSDITQINLKITQYGPTPIEE 121
Query: 387 LTDGE 401
D +
Sbjct: 122 KKDDQ 126
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 44.0 bits (99), Expect = 0.001
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +3
Query: 69 VDEHKLRIFYEKRMGAEVDAD-LLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 245
VD++K ++G +A+ L+G K L++ GG+D GFPM+ V+ ++ ++L+
Sbjct: 121 VDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAAKRKILL 177
Query: 246 SKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVR 362
S + NG+R+RK++RG + + + +IVR
Sbjct: 178 SGPPGFYPNE--NGERRRKTIRGNTISQEIVQINTIIVR 214
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 41.9 bits (94), Expect = 0.006
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +3
Query: 108 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVVNG 287
+G E DA ++G K L++ GG+DK G PM+ + +R +L+SKG + G
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVGLQDAE--KG 87
Query: 288 KRKRKSVRGCIVDANL 335
+R RK +RG V +
Sbjct: 88 QRVRKLMRGNTVSEEI 103
>UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 136
Score = 40.7 bits (91), Expect = 0.014
Identities = 28/96 (29%), Positives = 47/96 (48%)
Frame = +3
Query: 102 KRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVV 281
K +G VD + G GY +++ GG D GF MK + R R+L + G +
Sbjct: 32 KSIGDVVDGSIFG--LAGYKVQITGGCDGSGFVMKPDLPGPRRQRILTATGVG--YVPKL 87
Query: 282 NGKRKRKSVRGCIVDANLSVLALVIVRKGAQEIPGL 389
G+R+RK +RG + ++ + +V G++ I L
Sbjct: 88 PGQRRRKMMRGKEIAPDIVQVNAKVVEYGSKSIKAL 123
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 40.3 bits (90), Expect = 0.018
Identities = 27/85 (31%), Positives = 44/85 (51%)
Frame = +3
Query: 105 RMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVVN 284
++G D L+G GY L + GG+D GFPM + + R+L+S +
Sbjct: 132 KIGDTFDGGLVG--LPGYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLSGPPGFHPRE--K 187
Query: 285 GKRKRKSVRGCIVDANLSVLALVIV 359
G+R+RK+VRG + ++ + VIV
Sbjct: 188 GERRRKTVRGNTITHDIVQINTVIV 212
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 39.9 bits (89), Expect = 0.024
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +3
Query: 9 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDK 188
+V+K+ VS P +G E + L Y K++G +D +G + GY L++ GG+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59
Query: 189 QGFPMKQGV 215
GFPM++ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 36.7 bits (81), Expect = 0.22
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 108 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVVNG 287
+G D L+G G ++ GG D G PM GV + R ++L++ + G
Sbjct: 142 IGDVFDGGLIG--MPGLKFKIRGGTDATGIPMHPGVPGSGRYKVLLAGPPGFHPRE--RG 197
Query: 288 KRKRKSVRGCIV 323
+R+RKSVRG ++
Sbjct: 198 ERRRKSVRGRMI 209
>UniRef50_Q5DFQ5 Cluster: SJCHGC04650 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04650 protein - Schistosoma
japonicum (Blood fluke)
Length = 219
Score = 36.3 bits (80), Expect = 0.29
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 177 RRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQITSDIPL 40
R++ GE ++ + LEDLH+L + RR+G P L + PL
Sbjct: 154 RKRPGEEDILLNYLEDLHKLHEAWLIERRFGPLPAPVLVFDCNAPL 199
>UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;
n=1; Haemophilus ducreyi|Rep: Possible uroporphyrinogen
III synthase - Haemophilus ducreyi
Length = 251
Score = 35.1 bits (77), Expect = 0.67
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLL 137
M + ++YPA+ QKL ++ +H++ Y+ E+ ADLL
Sbjct: 1 MNVLITYPASRAQKLVDMCQQHRIFAIYQPIFSVELGADLL 41
>UniRef50_Q2H164 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 744
Score = 33.1 bits (72), Expect = 2.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 421 GPRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQP 311
GP RRG +P +SP S P R+ R R+ ++ QP
Sbjct: 369 GPARRGQTPPISPPPSETPTRSAPREAMGRILTSSQP 405
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 32.7 bits (71), Expect = 3.6
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 18 KLNVSYPAT-GCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
KL+ SY A L EV D+ K RI+YE A + GD K YV+ V G D G
Sbjct: 441 KLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIK---FGDITKTYVVLVEGHYDNTG 497
Query: 195 FPMKQGVL 218
+K V+
Sbjct: 498 KNLKTQVI 505
>UniRef50_Q4PGL6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 712
Score = 32.3 bits (70), Expect = 4.7
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -1
Query: 430 ARLGPRRRGTSPSVSPGISCAPLRT---MTRAKTERLASTMQPRTDLRFLLPFTTL 272
A+L P+ RGTSPS+SP S P T R R + T P + P +TL
Sbjct: 55 AQLSPKIRGTSPSLSPNFSPKPGFTESLKARLSLSRKSMTSSPGLASKNSTPLSTL 110
>UniRef50_Q8YQA8 Cluster: Alr3925 protein; n=5; Nostocaceae|Rep:
Alr3925 protein - Anabaena sp. (strain PCC 7120)
Length = 987
Score = 31.9 bits (69), Expect = 6.3
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -2
Query: 180 YRRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQITSD 49
Y G+H+L+ E+ HQ+Q+ Y H+RYG P L++ D
Sbjct: 758 YEHLSGKHSLTD---EERHQIQK-YNLHQRYGILVTPSLKLRDD 797
>UniRef50_A5N0X0 Cluster: Putative uncharacterized protein; n=1;
Clostridium kluyveri DSM 555|Rep: Putative
uncharacterized protein - Clostridium kluyveri DSM 555
Length = 860
Score = 31.9 bits (69), Expect = 6.3
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 54 KLFEVVDEHKLRIFYEKRMGAEVDADLLGDE-WKGY 158
KL E ++HK IF +R+ E + LLGDE WK Y
Sbjct: 747 KLIEDDNQHKYTIFLSRRIEDEKNNVLLGDEIWKEY 782
>UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4;
Actinomycetales|Rep: ATP-dependent helicase HrpA -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 1282
Score = 31.9 bits (69), Expect = 6.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 66 VVDEHKLRIFYEKRMGAEVDADLLGDEW 149
VVDEH L FY+ R+GA+V + D+W
Sbjct: 774 VVDEHTLFDFYDARVGADVVSGAHFDQW 801
>UniRef50_Q6NZL8 Cluster: Signal peptide, CUB and EGF-like
domain-containing protein 1 precursor; n=10;
Tetrapoda|Rep: Signal peptide, CUB and EGF-like
domain-containing protein 1 precursor - Mus musculus
(Mouse)
Length = 1018
Score = 31.9 bits (69), Expect = 6.3
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 436 LDARLGPRRRGTSPSVSPGISCA---PLRTMTRAKTERLASTMQPRTDLR 296
L + P+R GTS S PG S A P+R R K +QPR+ R
Sbjct: 487 LQGKTLPKRNGTSSSTGPGCSDAPTTPIRQKARFKIRDAKCHLQPRSQER 536
>UniRef50_Q60BZ5 Cluster: Selenium-binding family protein; n=4;
Proteobacteria|Rep: Selenium-binding family protein -
Methylococcus capsulatus
Length = 459
Score = 31.5 bits (68), Expect = 8.3
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +3
Query: 45 GCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKG----YVLRVAGGNDKQG 194
G +LF++ D H R YEK +GA+V +++ W G Y + DK+G
Sbjct: 348 GKTRLFDISDPHHPRQVYEKTIGAQV--NMVSSSWDGQRLYYTSSLLANWDKKG 399
>UniRef50_A7TEH8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 541
Score = 31.5 bits (68), Expect = 8.3
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 48 CQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 227
C+ L+E E I R+ + + L G W G + + G +QG +K+ ++ N
Sbjct: 451 CELLYECSCEEIEEICTIARLNGSIGSRLTGAGWGGSTIHMVPGGIEQGERVKEALINNY 510
Query: 228 RVR 236
+R
Sbjct: 511 YIR 513
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 431,516,701
Number of Sequences: 1657284
Number of extensions: 8273857
Number of successful extensions: 20161
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 19736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20131
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -