Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_I08
(442 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 244 3e-65
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 244 3e-65
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 244 3e-65
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 244 3e-65
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 244 3e-65
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 240 5e-64
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 179 2e-45
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 179 2e-45
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 175 2e-44
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 175 2e-44
AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA... 30 1.2
AE013599-3303|AAM71023.1| 377|Drosophila melanogaster CG30401-P... 29 2.8
BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p pro... 27 8.6
AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-P... 27 8.6
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 244 bits (598), Expect = 3e-65
Identities = 113/142 (79%), Positives = 129/142 (90%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPMKQGVLT+ RVRLL+ KGHSC + + G+RKRKSVRGCIVDAN+SVLALV+++KG +
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPR-RTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
+IPGLTD +PRRLGPKRASKI
Sbjct: 120 DIPGLTDTTIPRRLGPKRASKI 141
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 244 bits (598), Expect = 3e-65
Identities = 113/142 (79%), Positives = 129/142 (90%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPMKQGVLT+ RVRLL+ KGHSC + + G+RKRKSVRGCIVDAN+SVLALV+++KG +
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPR-RTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
+IPGLTD +PRRLGPKRASKI
Sbjct: 120 DIPGLTDTTIPRRLGPKRASKI 141
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 244 bits (598), Expect = 3e-65
Identities = 113/142 (79%), Positives = 129/142 (90%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPMKQGVLT+ RVRLL+ KGHSC + + G+RKRKSVRGCIVDAN+SVLALV+++KG +
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPR-RTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
+IPGLTD +PRRLGPKRASKI
Sbjct: 120 DIPGLTDTTIPRRLGPKRASKI 141
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 244 bits (598), Expect = 3e-65
Identities = 113/142 (79%), Positives = 129/142 (90%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPMKQGVLT+ RVRLL+ KGHSC + + G+RKRKSVRGCIVDAN+SVLALV+++KG +
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPR-RTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
+IPGLTD +PRRLGPKRASKI
Sbjct: 120 DIPGLTDTTIPRRLGPKRASKI 141
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 244 bits (598), Expect = 3e-65
Identities = 113/142 (79%), Positives = 129/142 (90%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPMKQGVLT+ RVRLL+ KGHSC + + G+RKRKSVRGCIVDAN+SVLALV+++KG +
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPR-RTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
+IPGLTD +PRRLGPKRASKI
Sbjct: 120 DIPGLTDTTIPRRLGPKRASKI 141
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 240 bits (588), Expect = 5e-64
Identities = 111/140 (79%), Positives = 127/140 (90%)
Frame = +3
Query: 21 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFP 200
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFP
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFP 65
Query: 201 MKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQEI 380
MKQGVLT+ RVRLL+ KGHSC + + G+RKRKSVRGCIVDAN+SVLALV+++KG ++I
Sbjct: 66 MKQGVLTHGRVRLLLKKGHSCYRPR-RTGERKRKSVRGCIVDANMSVLALVVLKKGEKDI 124
Query: 381 PGLTDGEVPRRLGPKRASKI 440
PGLTD +PRRLGPKRASKI
Sbjct: 125 PGLTDTTIPRRLGPKRASKI 144
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 179 bits (435), Expect = 2e-45
Identities = 83/111 (74%), Positives = 98/111 (88%)
Frame = +3
Query: 108 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVVNG 287
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSC + + G
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPR-RTG 59
Query: 288 KRKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKI 440
+RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKI
Sbjct: 60 ERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKI 110
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 179 bits (435), Expect = 2e-45
Identities = 83/111 (74%), Positives = 98/111 (88%)
Frame = +3
Query: 108 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSC*QTKVVNG 287
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSC + + G
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPR-RTG 59
Query: 288 KRKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKI 440
+RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKI
Sbjct: 60 ERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKI 110
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 175 bits (427), Expect = 2e-44
Identities = 92/142 (64%), Positives = 106/142 (74%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPMKQGVLT+ R+RLL K HSC + N RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPR-CNKVRKCKTVRKYTVEANVSALTLVVLKKNPS 118
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
P RLGP R+S I
Sbjct: 119 ----------PCRLGPVRSSNI 130
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 175 bits (427), Expect = 2e-44
Identities = 92/142 (64%), Positives = 106/142 (74%)
Frame = +3
Query: 15 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 194
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 195 FPMKQGVLTNSRVRLLMSKGHSC*QTKVVNGKRKRKSVRGCIVDANLSVLALVIVRKGAQ 374
FPMKQGVLT+ R+RLL K HSC + N RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPR-CNKVRKCKTVRKYTVEANVSALTLVVLKKNPS 118
Query: 375 EIPGLTDGEVPRRLGPKRASKI 440
P RLGP R+S I
Sbjct: 119 ----------PCRLGPVRSSNI 130
>AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA
protein.
Length = 1399
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 192 PACRYRRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQ 61
PA +QH +H L+ R ++ + P HR GA A P+Q
Sbjct: 1035 PASNLNKQHADHYLANERKDNALDYKPPVPPHRNVGARACLPVQ 1078
>AE013599-3303|AAM71023.1| 377|Drosophila melanogaster CG30401-PB,
isoform B protein.
Length = 377
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -1
Query: 442 RILDARLGPRRRG-TSPSVSPGISCAPLRTMTRAKTE-RLASTMQPRTDLRFLLPFTTLV 269
R +L R++ TS S+S SC + + T +L ++ P+T+ +F F +L+
Sbjct: 28 RRFKCQLAQRQKSRTSQSLSNKSSCRAEQNVRNTTTRVKLCKSLDPKTNRKFFTAFFSLL 87
Query: 268 C 266
C
Sbjct: 88 C 88
>BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p
protein.
Length = 638
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 309 RGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 422
R I+ ++ A+V+V G +E DG+ RRL P
Sbjct: 284 RNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 321
>AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-PA
protein.
Length = 681
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 309 RGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 422
R I+ ++ A+V+V G +E DG+ RRL P
Sbjct: 327 RNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 364
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,573,208
Number of Sequences: 53049
Number of extensions: 400676
Number of successful extensions: 899
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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