Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_I06
         (407 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-7|CAB60598.1|  234|Caenorhabditis elegans Hypothetical ...    79   1e-15
Z92849-5|CAB07430.1|  163|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U00042-1|AAA50674.1|  456|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr...    26   9.1  

>AL132865-7|CAB60598.1|  234|Caenorhabditis elegans Hypothetical
           protein Y62E10A.10 protein.
          Length = 234

 Score = 79.0 bits (186), Expect = 1e-15
 Identities = 38/61 (62%), Positives = 47/61 (77%)
 Frame = +3

Query: 12  LELLYLDASWVSSASWYFLNVFGLRTIYALVLGENNAADQSKVMQDQMSGATNGYATRSQ 191
           ++L+ LD++WVSSASWYFL +FGLR+IY LVLG  NAADQSK M+DQM  A  G A   Q
Sbjct: 154 VDLVSLDSAWVSSASWYFLCMFGLRSIYTLVLGSENAADQSKAMEDQM--AMTGSAVNPQ 211

Query: 192 S 194
           +
Sbjct: 212 A 212


>Z92849-5|CAB07430.1|  163|Caenorhabditis elegans Hypothetical
           protein H12D21.6 protein.
          Length = 163

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 75  FGLRTIYALVLGENNAADQSKVMQDQMSGATNGYATRSQSRFQGRMGSS 221
           FG +   +  +G NN        Q   SG++    + SQS F G+MGSS
Sbjct: 93  FGNQESQSSGMGSNNQRQSGFGGQMGSSGSSGSSGSSSQSGFGGQMGSS 141


>Z71181-1|CAA94894.1|  395|Caenorhabditis elegans Hypothetical
           protein K07C5.1 protein.
          Length = 395

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -3

Query: 204 LESGFGIGWH--SHWWLQTFDPASPSIDPQHCFL 109
           +++G    W   +H W  TF P    IDP+ C L
Sbjct: 74  MDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKL 107


>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical protein
            F20B10.1 protein.
          Length = 1180

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 13/68 (19%)
 Frame = +2

Query: 68   QCV-WFTDYICSC----FGRKQCCGS--IEGDAGSNV---W---SHQWLCHPIPKPLSRQ 208
            QCV  +  Y+C C    FG   C     +   AGS++   W   +HQ +CH I    + +
Sbjct: 873  QCVDKYDGYVCDCSMTPFGGSDCTKEYGMMVPAGSSIQIPWQNPAHQAMCHRIAIQTTSR 932

Query: 209  NGKLLKSQ 232
            N  +L+S+
Sbjct: 933  NTTILRSK 940


>U00042-1|AAA50674.1|  456|Caenorhabditis elegans Hypothetical
           protein T04A6.3 protein.
          Length = 456

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +2

Query: 77  WFTDYICSCFGRKQCCGSIEGDAGSNVWSHQWLCHPIPKPLSRQNGKLLKSQNTSGH 247
           WF +  C   G  Q    +    G  V  H++   P P+P +   GK+ K  + + H
Sbjct: 111 WFNNDYCKSVGSIQLLVRL----GPQVVGHEYGWIPFPEPANFDAGKIWKPVHVNNH 163


>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
           protein T01G1.3 protein.
          Length = 1083

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 159 QTFDPASPSIDPQHCFLPKQE 97
           Q FDP + SI+P+  FLP  E
Sbjct: 31  QFFDPTATSIEPKIDFLPASE 51


>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
           protein T01G1.3 protein.
          Length = 1083

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 159 QTFDPASPSIDPQHCFLPKQE 97
           Q FDP + SI+P+  FLP  E
Sbjct: 31  QFFDPTATSIEPKIDFLPASE 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,455,110
Number of Sequences: 27780
Number of extensions: 162449
Number of successful extensions: 358
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)