Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_I06
         (407 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         24   0.76 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   1.0  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   3.1  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    20   9.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   9.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   9.4  

>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 23.8 bits (49), Expect = 0.76
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 97  LLFWEKTMLRINRR*CRIKCL 159
           +L W+   L IN   C I+CL
Sbjct: 66  VLSWQSKWLSINHSACAIRCL 86


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 121 ALFSPKTRAYIVRKPNTLRKYHEADET 41
           A+ S  T  Y+V   NTL  Y  AD++
Sbjct: 194 AMDSTNTMVYMVDNKNTLIIYQNADDS 220


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 371 ISNKHHNLLTDIDINIIHN 315
           +SNK +N+L    IN+I +
Sbjct: 83  LSNKEYNMLRTTAINVIRH 101


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 262 LLQ*LVPTCVL*FQELPIL 206
           +LQ   P CV  FQE P L
Sbjct: 403 MLQPTKPMCVEAFQEFPPL 421


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -1

Query: 362 KHHNLLTDIDINIIHNANKTSIENY 288
           K HN+ ++  +NI+ N  + + ++Y
Sbjct: 349 KWHNIYSEKGLNILGNIIEGNADSY 373


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -1

Query: 362 KHHNLLTDIDINIIHNANKTSIENY 288
           K HN+ ++  +NI+ N  + + ++Y
Sbjct: 349 KWHNIYSEKGLNILGNIIEGNADSY 373


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,540
Number of Sequences: 438
Number of extensions: 2220
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)