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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_I03
         (545 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC63.12c |||20S proteasome component beta 3|Schizosaccharomyce...   216   2e-57
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar...    74   2e-14
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc...    53   2e-08
SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyce...    50   3e-07
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc...    47   2e-06
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar...    38   7e-04
SPAC1687.15 |gsk3|skp1|serine/threonine protein kinase Gsk3|Schi...    30   0.19 
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc...    29   0.59 
SPMIT.11 |cox2||cytochrome c oxidase 2|Schizosaccharomyces pombe...    25   5.5  
SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4 |Schi...    25   5.5  
SPBC25H2.15 |||programmed cell death protein homolog|Schizosacch...    25   5.5  
SPBC4B4.01c |||fumble family pantothenate kinase |Schizosaccharo...    25   7.3  
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ...    25   7.3  
SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr...    25   7.3  
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ...    25   7.3  
SPBC336.02 |||18S rRNA dimethylase|Schizosaccharomyces pombe|chr...    25   7.3  
SPAC1039.01 |||amino acid permease, unknown 5|Schizosaccharomyce...    25   7.3  
SPCC330.07c |||membrane transporter|Schizosaccharomyces pombe|ch...    25   9.6  
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy...    25   9.6  

>SPCC63.12c |||20S proteasome component beta 3|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 204

 Score =  216 bits (527), Expect = 2e-57
 Identities = 94/164 (57%), Positives = 131/164 (79%)
 Frame = +2

Query: 53  MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 232
           MSI+ YNGG+ VAM G++CVAIA+D R G+Q+ +++ NFPKVF MG   Y+GL GLATD 
Sbjct: 1   MSIMEYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDV 60

Query: 233 QTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPY 412
           QT+ +  ++++NLY+ +E R ++PKTF+ ++S+ LYEKRFGPYF  PV+AG+   DNTP+
Sbjct: 61  QTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVS-NDNTPF 119

Query: 413 VCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELF 544
           +C  D IGC +  EDF+VSGT +EQLYGMCE+++EPNL+PD+LF
Sbjct: 120 ICGFDSIGCIDFAEDFIVSGTATEQLYGMCESVYEPNLEPDDLF 163


>SPAC22F8.06 |pam1||20S proteasome component beta
           6|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 225

 Score = 73.7 bits (173), Expect = 2e-14
 Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
 Frame = +2

Query: 71  NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNF-PKVFQMGPTLYVGLPGLATDTQTVLQ 247
           NGG  VA+ G     +A D R  +    ++T F P+V ++G  L +G  G   D   +++
Sbjct: 12  NGGTTVAIAGDGFAILAGDTR-SVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVK 70

Query: 248 RLKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLD 391
           R++ R++LY     R M  ++ + M+  LLY KRF PY++   +AG+D
Sbjct: 71  RIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGID 118


>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 226

 Score = 53.2 bits (122), Expect = 2e-08
 Identities = 37/155 (23%), Positives = 73/155 (47%)
 Frame = +2

Query: 74  GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQRL 253
           G  + A++ +D V +A D R  + A   +    K+ Q+   ++    G A DTQTV   L
Sbjct: 24  GTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLL 83

Query: 254 KFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLI 433
           K+ +++Y ++        T + + S + Y+ +        ++AG D       V ++ L 
Sbjct: 84  KYYLSMYRIQFGHDPSVHTAATLASEMCYQNK-NMLSAGLIVAGYDEKTGGD-VYSIPLG 141

Query: 434 GCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDE 538
           G  ++ +   + G+ S  +YG C+A +  N+  +E
Sbjct: 142 GSLHK-QPLAIGGSGSAFIYGFCDANFRENMTQEE 175


>SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 262

 Score = 49.6 bits (113), Expect = 3e-07
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
 Frame = +2

Query: 74  GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQRL 253
           G +V+A+K  D V IA D      +     +  ++ ++G    VG  G  +D Q + QRL
Sbjct: 43  GSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQI-QRL 101

Query: 254 KFRMNLYE--LKENRIMKPKTFSAMLSNLLYEKR--FGPYFIEPVIAGLDPYDNTPYVCN 421
             ++ + E    +   ++P      LS +LY +R    PY+ + ++AG+D  +  PYV  
Sbjct: 102 LEKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAF 161

Query: 422 MDLIG 436
            DL G
Sbjct: 162 ADLRG 166


>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 259

 Score = 47.2 bits (107), Expect = 2e-06
 Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
 Frame = +2

Query: 74  GGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQRL 253
           G   +A++G +C+ I  +++   + Q VS NF K+  +   + +   GL  D + ++ + 
Sbjct: 30  GTTAIALRGNECIVIGVERKNVPKLQNVS-NFQKIAMVDNHVCLAFAGLNADARILIDKA 88

Query: 254 KFRMNLYELKENRIMKPKTFSAMLSNLL--YEKRFG--PYFIEPVIAGLDPYDNTPYVCN 421
           +     ++L     +  +  +  ++ +   Y +  G  P+ +  +IAG D  DNTP V  
Sbjct: 89  RVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQ 148

Query: 422 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDE 538
            +  G  N  +   + G  S+      E  W+  L  DE
Sbjct: 149 TEPAGIYNAWKATAI-GRASKAAREYLEKNWKEGLSRDE 186


>SPAC4A8.13c |pts1||20S proteasome component beta
           5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 272

 Score = 38.3 bits (85), Expect = 7e-04
 Identities = 36/156 (23%), Positives = 63/156 (40%)
 Frame = +2

Query: 71  NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVLQR 250
           +G   +A + Q  + +  D R        S    KV ++ P L   L G A D Q     
Sbjct: 60  HGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETV 119

Query: 251 LKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 430
           L     L++L+   ++     S +LSN+ Y  +     +  ++AG        Y  + D 
Sbjct: 120 LGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYYIDSD- 178

Query: 431 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDE 538
            G   + + F V G+ S   YG+ ++ +  +L   E
Sbjct: 179 -GTRLKGDLFSV-GSGSTFAYGVLDSGYRWDLSKQE 212


>SPAC1687.15 |gsk3|skp1|serine/threonine protein kinase
           Gsk3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 387

 Score = 30.3 bits (65), Expect = 0.19
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -2

Query: 475 CSRHYKILGLI-GATDQIHITNIWS 404
           CSR+Y+   LI GATD  H  +IWS
Sbjct: 194 CSRYYRAPELIFGATDYTHAIDIWS 218


>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 498

 Score = 28.7 bits (61), Expect = 0.59
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 77  GAVVAMKGQD-CVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLAT 226
           GA+     +D  VA A D   G+     S +  +VF++G  L VG+ G  T
Sbjct: 407 GALFKFDTEDEVVAWANDSPVGLAGYLFSKDISRVFRVGEALQVGMVGCNT 457


>SPMIT.11 |cox2||cytochrome c oxidase 2|Schizosaccharomyces
           pombe|chr mitochondrial|||Manual
          Length = 248

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 11/49 (22%), Positives = 23/49 (46%)
 Frame = -3

Query: 237 VCVSVARPGSPTYNVGPI*NTLGKLVETVWAWIPKRLSVAIATQSWPFI 91
           +C +V      ++ +     T G +VE +W  IP  + + +A  S+  +
Sbjct: 52  ICKAVIEYNYNSHPIAAKYTTHGSIVEFIWTLIPALILILVALPSFKLL 100


>SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 865

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +2

Query: 269 LYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPY 412
           +Y  K N+  + +  S     +L + +     +EP  A L P   TPY
Sbjct: 583 IYSYKRNKNTEVQQRSVEFHLILNDSKLSKTILEPTPAPLPPPRTTPY 630


>SPBC25H2.15 |||programmed cell death protein
           homolog|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 396

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
 Frame = -3

Query: 528 FRLGSQRASHIPYNCSEH----VPDTTKSSGSLGQPIKSI 421
           FRL S++ SH P  C  +     P        LGQ +KS+
Sbjct: 285 FRLFSEKISHNPTQCLRYERGGTPLLASGRDKLGQQLKSV 324


>SPBC4B4.01c |||fumble family pantothenate kinase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 403

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 8/19 (42%), Positives = 17/19 (89%)
 Frame = +2

Query: 128 KRFGIQAQTVSTNFPKVFQ 184
           +RFG+++ T++++F KVF+
Sbjct: 281 ERFGLKSTTIASSFGKVFR 299


>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 803

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 516 SQRASHIPYNCSEHVPDTTKSSGSLGQPIKS 424
           S+R+SH  Y+ S HVP    +S  +    KS
Sbjct: 582 SERSSHSSYHNSSHVPTAAFNSPIMRTSTKS 612


>SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 272

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +2

Query: 212 PGLATDTQTVLQRLKFRMN--LYELKENRIMKPK 307
           P L  D+   L +L  R N  +YE K  R++KPK
Sbjct: 69  PFLNKDSGVDLLKLHSRSNSRIYEAKPKRVIKPK 102


>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1427

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = -3

Query: 378 ITGSMKYGPNLFSY----NKFDSIAEKVLGFIILFSFSSYKF 265
           I  S+KYG  LFS+    N F  +  +++      ++SS+ F
Sbjct: 105 ILSSLKYGSTLFSWISVANAFGLLLLRLISIYDFLTYSSWSF 146


>SPBC336.02 |||18S rRNA dimethylase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 307

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 205 NI*CWSHLKHFRKVG 161
           N+  W+H+KH  KVG
Sbjct: 172 NVQMWAHVKHIMKVG 186


>SPAC1039.01 |||amino acid permease, unknown 5|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 567

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 9/42 (21%), Positives = 21/42 (50%)
 Frame = -2

Query: 526 QIGFPEGFTHSVQLFRACSRHYKILGLIGATDQIHITNIWSV 401
           ++G+ + F   + LF   S  + +LG++ +     +  +W V
Sbjct: 54  ELGYKQEFRRQLSLFGIFSISFSVLGMLPSVASTLVFGLWYV 95


>SPCC330.07c |||membrane transporter|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 500

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 129 NALVSRPKLSPPTFLKCFRWDQHYMLGSLVL 221
           +AL+  P +   +FL  +  D+H MLG L L
Sbjct: 357 SALIVAPFILASSFLSRWLEDRHIMLGGLFL 387


>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 4924

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 10/105 (9%)
 Frame = +2

Query: 185 MGPTLYVGLPGL--ATDTQTVLQRLKFRMNLYELKENRIMKPKTFSAMLSNLLY---EKR 349
           M PT YVGLPG       +T  + LK + +  +              +++N+L+   EKR
Sbjct: 673 MCPTKYVGLPGFPRLASGKTDRKALKIQFSASDKHSTDFSSFNQSELLVANVLHEICEKR 732

Query: 350 FGPY-----FIEPVIAGLDPYDNTPYVCNMDLIGCPNEPEDFVVS 469
           F        F      GLD  D   +V  +  +G    P   + S
Sbjct: 733 FNSVVSISRFSSIFDLGLDSLDIVYFVRKIRSLGFEANPSIVLTS 777


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,515,947
Number of Sequences: 5004
Number of extensions: 55093
Number of successful extensions: 172
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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