Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_I02
         (527 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VKQ5 Cluster: CG17124-PA, isoform A; n=7; Endopterygo...    41   0.015
UniRef50_UPI0000F2BEC5 Cluster: PREDICTED: similar to Forkhead b...    33   5.4  

>UniRef50_Q9VKQ5 Cluster: CG17124-PA, isoform A; n=7;
           Endopterygota|Rep: CG17124-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 124

 Score = 41.1 bits (92), Expect = 0.015
 Identities = 18/32 (56%), Positives = 24/32 (75%)
 Frame = +3

Query: 3   RRHLAVLLADAKKPQKDVHKFINELLEKAKTL 98
           R HL  LL+  K+PQ D+ KFI +LL++AKTL
Sbjct: 93  RSHLIRLLSVCKRPQSDISKFIGDLLDRAKTL 124


>UniRef50_UPI0000F2BEC5 Cluster: PREDICTED: similar to Forkhead box
           P4; n=1; Monodelphis domestica|Rep: PREDICTED: similar
           to Forkhead box P4 - Monodelphis domestica
          Length = 703

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 30/90 (33%), Positives = 38/90 (42%)
 Frame = -3

Query: 348 IGSSVVAASRLYSTLVYSR*RCSSLICRDSQYLQLXXXXXXXXXXXAPHVPHASYAPHVL 169
           +G S  + S   S L YSR   S+L    S+  +             PH PH    PH L
Sbjct: 621 LGQSPSSVSDPASELSYSRKLLSTLFASPSRDRRRRSCRLGRSRTPPPH-PH----PHSL 675

Query: 168 RATRA*ETLCPSHFTLEPDVRSLTKFSPSL 79
             +RA   LCPS+ T      SLT  +P L
Sbjct: 676 LLSRAGRLLCPSYLTTTRG--SLTSLAPLL 703


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,793,927
Number of Sequences: 1657284
Number of extensions: 5965833
Number of successful extensions: 13508
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13482
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)