Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_I02
         (527 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   1.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   1.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   1.9  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   2.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   5.9  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 409 CSSKSVPRGKNGARCGPV 462
           C+ +S PR K  A  GP+
Sbjct: 53  CADRSAPRVKKTASAGPI 70


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 440 TARAADPCSTAQHSTAQQCSASP 508
           ++R+ DPC++      ++C  SP
Sbjct: 75  SSRSIDPCASKYCGIGKECELSP 97


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 409 CSSKSVPRGKNGARCGPV 462
           C+ +S PR K  A  GP+
Sbjct: 143 CADRSAPRVKKTASAGPI 160


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +2

Query: 245 SCRYCESLHIS 277
           SC+YCE +++S
Sbjct: 18  SCKYCEKVYVS 28


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 36   WRPPAAPRG 10
            WRPP+ P G
Sbjct: 1200 WRPPSQPNG 1208


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,047
Number of Sequences: 438
Number of extensions: 1934
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)