Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_I01
(491 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 210 6e-56
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 190 1e-49
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 122 3e-29
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 122 4e-29
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 113 1e-26
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 58 5e-10
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 52 5e-08
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 27 1.5
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 25 4.7
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 25 6.2
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 25 6.2
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 25 6.2
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.2
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 25 8.2
SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|... 25 8.2
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 210 bits (514), Expect = 6e-56
Identities = 97/164 (59%), Positives = 124/164 (75%), Gaps = 1/164 (0%)
Frame = +2
Query: 2 RLADLIERDRVYLASLETLDNGKPYTAAYYGDLAAVVKNLRYFAGWADKNHGRTLPTDGK 181
RLAD IE++ YLAS+ETLDNGK T A GD+ A RY+ GWADK++G+T+ TD K
Sbjct: 93 RLADCIEQNLEYLASIETLDNGKSITLAR-GDVQAAADCFRYYGGWADKDYGQTIETDIK 151
Query: 182 YFAYTRHEPVGVCGQIIPWNFPLLMAAWKLGPALATGCTLVMKPAEQTPLTALYIAQLVE 361
FAYTRHEP+GVCGQIIPWNFP LM AWK+ PA+A G T+++K AE TPL+AL + + V
Sbjct: 152 RFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLSALCLTKFVP 211
Query: 362 EAGFPPGVVNMLPGYG-DAGAALVDHPDVDEIAFTGSTEVGKVI 490
E GFPPGV+N+L G G G A+ H D+D++AFTGST VG+++
Sbjct: 212 ECGFPPGVINVLSGDGRRCGNAISSHMDIDKVAFTGSTGVGRMV 255
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 190 bits (462), Expect = 1e-49
Identities = 85/164 (51%), Positives = 117/164 (71%), Gaps = 1/164 (0%)
Frame = +2
Query: 2 RLADLIERDRVYLASLETLDNGKPYTAAYYGDLAAVVKNLRYFAGWADKNHGRTLPTDGK 181
+LA+L E+ LA++E +D+GKP + GD+ + LRY AGWADK +G+ +PT +
Sbjct: 86 KLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYGQVIPTGPE 145
Query: 182 YFAYTRHEPVGVCGQIIPWNFPLLMAAWKLGPALATGCTLVMKPAEQTPLTALYIAQLVE 361
AY + P+GVCGQI+PWN+PL MA WK+ PALA G +++K AE TPL+ LY A LVE
Sbjct: 146 KLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSLLYFATLVE 205
Query: 362 EAGFPPGVVNMLPGYGD-AGAALVDHPDVDEIAFTGSTEVGKVI 490
EAGFP GVVN++ G G AG+ + HP +D+IAFTGST+VG ++
Sbjct: 206 EAGFPKGVVNIISGLGTVAGSYMAKHPGIDKIAFTGSTKVGVIV 249
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 122 bits (294), Expect = 3e-29
Identities = 66/167 (39%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Frame = +2
Query: 2 RLADLIERDRVYLASLETLDNGKPYTAAYYGDLAAVVKNLRYFAGWADKNHGRT---LPT 172
++A ++ R LA ++T++ GKP A + D+ + Y+A A+ ++ LP
Sbjct: 92 KIAKMMREKRELLAGIDTINCGKPTPYALF-DIDSCADMFEYYAEVAETDNPTVKVPLPN 150
Query: 173 DGKYFAYTRHEPVGVCGQIIPWNFPLLMAAWKLGPALATGCTLVMKPAEQTPLTALYIAQ 352
+ + A+ + P GV G I PWNFPL MA WKL PA+A+G +V+KP+E P + L A
Sbjct: 151 NPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSELAPWSCLEFAL 210
Query: 353 LVEEAGFPPGVVNMLPGYG-DAGAALVDHPDVDEIAFTGSTEVGKVI 490
+ +EAG P GV+N++ G G ++GAAL HP + +AFTGS GK I
Sbjct: 211 ICKEAGLPDGVLNVIIGSGKESGAALSCHPKIAYLAFTGSLATGKKI 257
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 122 bits (293), Expect = 4e-29
Identities = 69/166 (41%), Positives = 101/166 (60%), Gaps = 3/166 (1%)
Frame = +2
Query: 2 RLADLIERDRVYLASLETLDNGKPYTAAYYGDLAAVVKNLRYFAGWADKNHG-RTLPTDG 178
R DLI + LA++ TL+NGK A G++ K + +FAG A + G ++ ++
Sbjct: 91 RWYDLIMENADDLATMMTLENGKALGDAK-GEVVYAAKFIDWFAGEALRISGDSSMSSNP 149
Query: 179 KYFAYTRHEPVGVCGQIIPWNFPLLMAAWKLGPALATGCTLVMKPAEQTPLTALYIAQLV 358
+ T +PVGV G I PWNFP M K+G ALA GCT+V++PA +TP TAL +A+L
Sbjct: 150 QNRIITIKQPVGVVGIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFTALALAKLA 209
Query: 359 EEAGFPPGVVNMLPGY--GDAGAALVDHPDVDEIAFTGSTEVGKVI 490
E AG P GV+NM+ + G L +P + +++FTGST VGK++
Sbjct: 210 ERAGVPAGVLNMVTANSPSEHGIELTTNPLIRKVSFTGSTNVGKIL 255
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 113 bits (273), Expect = 1e-26
Identities = 66/168 (39%), Positives = 96/168 (57%), Gaps = 5/168 (2%)
Frame = +2
Query: 2 RLADLIERDRVYLASLETLDNGKPYTAAYYGDLAAVVKNLRYFAGWADKNHGRTLPTD-- 175
R A+LI ++ L + TL+NGKP + A ++ L+++A A + G P+
Sbjct: 85 RWAELIMENKDDLVKMLTLENGKPLSQAEM-EVTTCSGYLKWYAAEAVRTFGDVAPSSLQ 143
Query: 176 GKYFAYTRHEPVGVCGQIIPWNFPLLMAAWKLGPALATGCTLVMKPAEQTPLTALYIAQL 355
+ F + +PVGV I PWNFP M A K G ALA GCT + PA +TP L + +L
Sbjct: 144 SQNFLISIKQPVGVSALITPWNFPAAMIARKGGAALAAGCTAIFLPAFRTPYVCLGLVRL 203
Query: 356 VEEAGFPPGVVNMLPGYGDA---GAALVDHPDVDEIAFTGSTEVGKVI 490
+EAGFP GV+N++ DA G L +P V +++FTGST VGK++
Sbjct: 204 AQEAGFPDGVLNVITS-SDASAHGKELTTNPIVRKVSFTGSTNVGKIL 250
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 58.4 bits (135), Expect = 5e-10
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Frame = +2
Query: 5 LADLIERDRVYLASLETLDNGKPYTAAYYGDLAAVVKNLRYFAGWADKN-----HGRTLP 169
L + I R++ A + D GK A +G++ ++ + + +++ +L
Sbjct: 56 LKENIIRNQDKYAEIACKDTGKTLVDAAFGEILVTLEKINWTLANGEQSLRPTKRPNSLL 115
Query: 170 TDGKYFAYTRHEPVGVCGQIIPWNFPLLMAAWKLGPALATGCTLVMKPAEQTP-LTALY- 343
T K Y ++EP+GV ++ WN+PL A + AL G +V+K +E T T Y
Sbjct: 116 TSYKG-GYVKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYC 174
Query: 344 --IAQLVEEAGFPPGVVNMLPGYGDAGAALVDHPDVDEIAFTGSTEVGKVI 490
+ L++ G P +V + D L H + I F GS + K++
Sbjct: 175 EMVRSLLQSMGHSPELVQCITCLPDVADHLTSHSGIKHITFIGSQPIAKLV 225
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 52.0 bits (119), Expect = 5e-08
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Frame = +2
Query: 29 RVYLASLETLDNGKPYTAAYYGDLAAVVKNLRYFAGWADKNHGRTLP--TDGKYFAYTRH 202
R L + + GK A ++ LR+ +A + + P T G +
Sbjct: 121 RYKLMAATMIGQGKNIWQAEIDAGMEIIDFLRFNTKYASELYASQPPENTPGVWNRMEYR 180
Query: 203 EPVGVCGQIIPWNFPLLMAAWKLGPALATGCTLVMKPAEQTPLTALYIAQLVEEAGFPPG 382
G I P+NF + P L G ++MKP++ L++ + Q+ EAG P G
Sbjct: 181 PLEGFVYAITPFNFTAIAGNLAAAPLLM-GNVVLMKPSDHAVLSSYIVYQIFREAGLPAG 239
Query: 383 VVNMLPGYG-DAGAALVDHPDVDEIAFTGSTEV 478
+ +PG + +HP+ + FTGST V
Sbjct: 240 ALQFIPGDAVEVSKVCFNHPEFAGLHFTGSTAV 272
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 27.1 bits (57), Expect = 1.5
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +2
Query: 59 DNGKPYTAAYYGDLAAVVKNLRYFAGWADKNHGRTLPTDGKYFAYTRH 202
DN PY + Y D +K L K HGR + GK F Y H
Sbjct: 190 DNKAPYFSLLYSDGFDFIKFLHVCV--CVKCHGREHRSSGKNFVYCDH 235
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 25.4 bits (53), Expect = 4.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -1
Query: 278 PALASKRPSTAGSSMVLFVHKPRRVRVLCTRNISHPWV 165
P L S S A S ++ K +R+ + + HPWV
Sbjct: 222 PPLPSNISSAAKSFLMQCFQKDPNLRIKTRKLLKHPWV 259
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 25.0 bits (52), Expect = 6.2
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = -3
Query: 453 ISSTSG*STRAAPASPYPGNILTTPGGKPASSTSCAIYRAVRGVCSAGFMTRVQPVASAG 274
+SS+S + S P N+ TTP ++ A+ V A ++ + +
Sbjct: 333 LSSSSVPFPHKSQDSATPANVETTPSTATSAPKKSTAPFAINAVKPAPGLSNISSASLPK 392
Query: 273 PSF--QAAINS 247
PSF QAA+ S
Sbjct: 393 PSFAKQAAVGS 403
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.0 bits (52), Expect = 6.2
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 477 TSVEPVKAISSTSG*STRAAPASPYPGNILTTPGGKPASST 355
TS P I + +T YPG++ TT G P++ T
Sbjct: 186 TSCPPPTTILIVTVPTTTTTTTVGYPGSVTTTLTGTPSNGT 226
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 25.0 bits (52), Expect = 6.2
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -1
Query: 386 PRRGGSLLPQ--RVARYTGLSGASAQLVS*LEYNR*RAPALASKRP 255
P R L P R++ YTGL AQL N P+L S RP
Sbjct: 395 PSRSTVLNPSTSRMSNYTGLESHLAQLSFKRRSNSATLPSLGSIRP 440
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 24.6 bits (51), Expect = 8.2
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = -3
Query: 480 PTSVEPVKAISSTSG*STRAAPASPYPGNILTTPGGKPASSTSCAIYRAVRGVCSAGFMT 301
PTS A+SS+S ++ +S + L+ P+SS+S Y + + ++G +
Sbjct: 114 PTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSSSVPSSSSS---YHS-SSMTTSGLSS 169
Query: 300 RVQPVASA---GPSFQAAINSGKFHGIICPQT 214
V+S GPS +++ ++ P T
Sbjct: 170 SASIVSSTYRDGPSIITLVSTSYVSEVVTPTT 201
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 24.6 bits (51), Expect = 8.2
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 11 DLIERDRVYLASLETLDNGKPYTA 82
D +E +VYL +LETL+N KP A
Sbjct: 581 DEVELAKVYLNALETLEN-KPSLA 603
>SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 348
Score = 24.6 bits (51), Expect = 8.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -3
Query: 153 WFLSAQPAK*RKFFTTAARSP*YAAVYGLPLSNVSKLAK 37
+F P KF T +R P V+ + L+NVS +K
Sbjct: 47 YFPKLNPRNYHKFVDTISRKPTRKLVHHISLNNVSYASK 85
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,135,022
Number of Sequences: 5004
Number of extensions: 46550
Number of successful extensions: 138
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 192109570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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