BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_I01
(491 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 31 0.021
AF000953-1|AAB96576.1| 433|Anopheles gambiae carboxypeptidase A... 25 1.4
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 1.9
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 23 5.7
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 23 5.7
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 22 9.9
AY146736-1|AAO12096.1| 131|Anopheles gambiae odorant-binding pr... 22 9.9
AJ697723-1|CAG26916.1| 131|Anopheles gambiae putative odorant-b... 22 9.9
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 31.1 bits (67), Expect = 0.021
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 408 PYPGNILTTPGGKPASSTSCAIYRAVRGVCSAGFMTRVQPVASA 277
P P + TTP K A+S+SC++ +AG + P+A A
Sbjct: 113 PRPAEVPTTPEHKSAASSSCSLSTLETQTATAGASVQSLPIAIA 156
>AF000953-1|AAB96576.1| 433|Anopheles gambiae carboxypeptidase A
protein.
Length = 433
Score = 25.0 bits (52), Expect = 1.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 404 YGDAGAALVDHPDVDEIA 457
YGD GA +H D++EIA
Sbjct: 322 YGDTGAHCGNHQDLNEIA 339
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.6 bits (51), Expect = 1.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 489 ITLPTSVEPVKAISSTSG*STRAAPASPYPGNILTTPGGKPASSTS 352
+ L PV +SS+ A SP P + LT+P G P + TS
Sbjct: 692 LNLSAGGSPVAVVSSSPTGGHHLA--SPSPHHHLTSPHGAPLALTS 735
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.0 bits (47), Expect = 5.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 368 GFPPGVVNMLPGYGDAGAALV 430
GF PG+V +L +GD ++ +
Sbjct: 611 GFNPGLVGLLRRFGDQSSSRI 631
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 23.0 bits (47), Expect = 5.7
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Frame = -1
Query: 170 WVESYRGSCPPNRRSNVN----SSLRQRDHR 90
WVE RG+ N+++ VN S+ RQ HR
Sbjct: 241 WVEVVRGNQRGNKQNGVNLPQQSAQRQPAHR 271
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 22.2 bits (45), Expect = 9.9
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 342 ISRNSLRKQASPPAWSICCR 401
+S +S AS AW + CR
Sbjct: 400 VSNHSASHSASEQAWDLSCR 419
>AY146736-1|AAO12096.1| 131|Anopheles gambiae odorant-binding
protein AgamOBP26 protein.
Length = 131
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 341 YIAQLVEEAGFPPGVVNMLPGYGDAGA 421
Y A+ V+ G PP L G AGA
Sbjct: 30 YAAECVKTTGVPPETAAKLKGGDFAGA 56
>AJ697723-1|CAG26916.1| 131|Anopheles gambiae putative
odorant-binding protein OBPjj13 protein.
Length = 131
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 341 YIAQLVEEAGFPPGVVNMLPGYGDAGA 421
Y A+ V+ G PP L G AGA
Sbjct: 30 YAAECVKTTGVPPETAAKLKGGDFAGA 56
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,057
Number of Sequences: 2352
Number of extensions: 12806
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -