BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_H23 (540 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0) 29 1.8 SB_23258| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4 SB_53942| Best HMM Match : 7tm_1 (HMM E-Value=7.8e-08) 28 5.6 SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6 SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61) 27 7.4 SB_59156| Best HMM Match : FlaC_arch (HMM E-Value=0.77) 27 9.8 SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8 >SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0) Length = 868 Score = 29.5 bits (63), Expect = 1.8 Identities = 19/65 (29%), Positives = 31/65 (47%) Frame = -2 Query: 290 DQIRPVAARDADWGIDKDSTGLFKSPKPAITNPHLKAGAQKNIVFGPASCSHSGRILDGT 111 D++ A++ + + + TGL P P TNPH A A + + C ++G T Sbjct: 113 DKVTLQASQMPEGAMFNNKTGLTWKPLPITTNPH-GATAVQAVTIALCDCKNNGTCDFDT 171 Query: 110 NLSVD 96 LSV+ Sbjct: 172 VLSVN 176 >SB_23258| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 66 Score = 29.1 bits (62), Expect = 2.4 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = +1 Query: 268 AATGLIWSRYSLVIIPKNYSLFAVNVFVA-ITSLYQI-SRAFRHQQSLKNKGSK 423 AATG WS + I KN+SL + + +A I L+ + + QQ K K +K Sbjct: 5 AATGHAWSSIGIEICYKNHSLVSTSSLLAEIRRLHSLQQKRTTQQQKAKKKTAK 58 >SB_53942| Best HMM Match : 7tm_1 (HMM E-Value=7.8e-08) Length = 435 Score = 27.9 bits (59), Expect = 5.6 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = +1 Query: 259 ASLAATGLIWSRYSLVIIP--KNYSLFAVNVFVAITSLYQISRAFRHQQSLKNKGSKQ*G 432 +SL T L RY ++ P + YS+ NV +T+++ IS LKNK S+ G Sbjct: 264 SSLTLTVLAVERYRALLKPMERKYSVSMENVKFVMTAIWGISILVNIPDFLKNKYSEHYG 323 >SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2708 Score = 27.9 bits (59), Expect = 5.6 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 65 KCRKSIEPLLHRLTNLFHQEFVRY 136 KC +EPLL +L ++ HQ ++Y Sbjct: 906 KCLSQVEPLLDKLLSVSHQSTLQY 929 >SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61) Length = 1226 Score = 27.5 bits (58), Expect = 7.4 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +1 Query: 169 FWAPAFKWGLVIAGLGDLNRPVES 240 ++AP GL AGLG LNRPV++ Sbjct: 253 WFAPPKGEGLTKAGLGRLNRPVDA 276 >SB_59156| Best HMM Match : FlaC_arch (HMM E-Value=0.77) Length = 339 Score = 27.1 bits (57), Expect = 9.8 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = -2 Query: 242 KDSTGLFKSPKPAITNPHLKAGAQKNI--VFGPASCSH 135 +DS LF P+P + + K K + V GPA C H Sbjct: 197 EDSHDLFFRPEPNVNTSNPKVWNMKKMKAVLGPAVCQH 234 >SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 942 Score = 27.1 bits (57), Expect = 9.8 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = -2 Query: 248 IDKDSTGLFKSPKPAITNPHLKAGAQKNIVFGPASCSHSGRILDG 114 IDKD+ L K P TNP A+ + + C + I DG Sbjct: 75 IDKDAGSLTKDPSEQDTNPESVFMAKDRVSAIQSLCEYEDSIEDG 119 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,159,832 Number of Sequences: 59808 Number of extensions: 290476 Number of successful extensions: 764 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 722 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 764 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1227799733 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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