Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_H21
         (546 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DUT5 Cluster: Chromosome undetermined scaffold_65, wh...    34   1.9  
UniRef50_Q2QUJ4 Cluster: Retrotransposon protein, putative, Ty1-...    33   4.3  
UniRef50_Q83I20 Cluster: 1-deoxy-D-xylulose-5-phosphate synthase...    33   4.3  
UniRef50_A4XKV4 Cluster: Transcriptional regulator, DeoR family;...    32   7.5  
UniRef50_A2E3D3 Cluster: DHHC zinc finger domain containing prot...    32   9.9  

>UniRef50_A0DUT5 Cluster: Chromosome undetermined scaffold_65, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_65,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 432

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -2

Query: 464 FWSYWTPLSGIIG*AYTPPLYMLTSYLTFFFFSKI 360
           FW YW  LS +IG A+T  + ++T  +  F++ +I
Sbjct: 152 FWWYWMYLSALIGSAFTLLMILITKLINQFYYHRI 186


>UniRef50_Q2QUJ4 Cluster: Retrotransposon protein, putative,
           Ty1-copia subclass; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Retrotransposon protein, putative,
           Ty1-copia subclass - Oryza sativa subsp. japonica (Rice)
          Length = 1050

 Score = 33.1 bits (72), Expect = 4.3
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 361 IFEKKKNVKYDVSIYRGGVYA*PIIPDNGVQYDQNFALVTFVK 489
           +F+KK +V  +V IY+  + A       GV YD+ F+LV  +K
Sbjct: 592 VFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSLVAMLK 634


>UniRef50_Q83I20 Cluster: 1-deoxy-D-xylulose-5-phosphate synthase;
           n=2; Tropheryma whipplei|Rep:
           1-deoxy-D-xylulose-5-phosphate synthase - Tropheryma
           whipplei (strain TW08/27) (Whipple's bacillus)
          Length = 629

 Score = 33.1 bits (72), Expect = 4.3
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -3

Query: 331 DVILSTYGIRRREMRMANKLTTEKF*ESDVINVKYHWP*FQQVLCKTRKEKL 176
           D+++   G+       A +L  E   ES VIN    WP  +QVL +  K KL
Sbjct: 512 DIVIVAIGVMAHACVRAAQLLAESGIESTVINPVCFWPLHRQVLARVSKAKL 563


>UniRef50_A4XKV4 Cluster: Transcriptional regulator, DeoR family;
           n=1; Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
           Transcriptional regulator, DeoR family -
           Caldicellulosiruptor saccharolyticus (strain ATCC 43494
           / DSM 8903)
          Length = 340

 Score = 32.3 bits (70), Expect = 7.5
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +1

Query: 346 STTVGI-FEKKKNVKYDVSIYRGGVYA*PIIPDNGVQYDQNFAL 474
           +TTVGI  EK KN+KY + +  G   A  I+  NG++++  F +
Sbjct: 284 TTTVGIKLEKIKNIKYMIGVAGGAHKAEAILSLNGIKHNTIFVI 327


>UniRef50_A2E3D3 Cluster: DHHC zinc finger domain containing
           protein; n=1; Trichomonas vaginalis G3|Rep: DHHC zinc
           finger domain containing protein - Trichomonas vaginalis
           G3
          Length = 219

 Score = 31.9 bits (69), Expect = 9.9
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -2

Query: 491 YFTNVTKAKFWSYWTPLSGIIG*AYTPPLYMLTSYLTFFFFSKIPT 354
           Y TN+TK KFW  +   + +I  A T PL +L +Y  +F  + I T
Sbjct: 140 YSTNITKTKFWVLY-GFTLLIDLALTIPLGILIAYHIYFQANNITT 184


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,436,590
Number of Sequences: 1657284
Number of extensions: 10370419
Number of successful extensions: 21413
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21403
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)