Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_H20
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 78 5e-15
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 61 5e-10
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 56 3e-08
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 56 3e-08
U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical pr... 31 0.47
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 31 0.47
AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical ... 31 0.62
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical p... 30 1.4
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effe... 30 1.4
Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical pr... 29 2.5
U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical pr... 29 2.5
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 29 2.5
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 28 4.4
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL032621-2|CAA21491.2| 147|Caenorhabditis elegans Hypothetical ... 28 5.8
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 27 7.7
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 27 7.7
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 77.8 bits (183), Expect = 5e-15
Identities = 45/136 (33%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Frame = +1
Query: 115 PPPLCICGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYA 294
PPP C C + PVCG+D TY N C C + + T C+ C
Sbjct: 15 PPPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCD---KKECEKVGT 71
Query: 295 PVCGSNGKTYANKC---SLECTQKIIPSLKME--HDGECQGAKLASLHPCICTREKDPVC 459
P+C + G+T+ N C +C K L + H G C H C T E DPVC
Sbjct: 72 PICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSKDCN--HNCTNT-EFDPVC 128
Query: 460 GSDGVTYSNLCLLKMR 507
++G Y NLC+ +MR
Sbjct: 129 DTNGSVYRNLCVFQMR 144
Score = 76.2 bits (179), Expect = 2e-14
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Frame = +1
Query: 133 CGKIYSPVCGSDGKTYENPCEF---YCEKDKTHSN-MTIVKNTACEVGIPCY--CTLEYA 294
C +SPVC S G T++N C F C ++T + +TI K C C C EY+
Sbjct: 818 CPSDFSPVCDSKGSTHQNICHFGVKRCIAERTFGDVLTIDKFEVCNEVKECNNACPKEYS 877
Query: 295 PVCGSNGKTYANKCSLECTQKIIPS-------LKMEHDGECQGAKLASLHPCICTREKDP 453
PVC SNG+ N+C L+ + ++ + L ++DGEC + C + P
Sbjct: 878 PVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGEC-----CRIENCDIS-VFSP 931
Query: 454 VCGSDGVTYSNLCLLKMRLL-----SKPSLSIEHTGPCDN 558
VC ++GVT++N+CL+ +K ++ + + G C N
Sbjct: 932 VCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCN 971
Score = 54.0 bits (124), Expect = 8e-08
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 23/167 (13%)
Frame = +1
Query: 133 CGKIYSPVCGSDGKTYENPCEFY---CEKDKTHSNMT-IVKNTACEVG----IPCYCTLE 288
C K + PVC + +T++N C+F C+ +K ++ I + AC I C +
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCITCPKDEK 316
Query: 289 YAPVCGSNGKTYANKCSL----------ECTQKIIPSLKMEHDGECQGAKLASLHPCICT 438
P+C + T+ CS E ++++ +K H+ Q + P C+
Sbjct: 317 KIPICDNRNMTHPTLCSFIQYNCEARNNEDEERVLVHIKSCHERSPQFTLKDEICPRTCS 376
Query: 439 REKDPVCGSDGVTYSNLCLLK-----MRLLSKPSLSIEHTGPCDNNR 564
R+ PVC T+ NLC + MR L S + + PC NR
Sbjct: 377 RDVKPVCDEANNTHQNLCHFQQYNCNMRKLGIRSPYLRYLRPCVKNR 423
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Frame = +1
Query: 133 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSN 312
C Y P+CG++G T+ N C +K+ S + ++ + C +++PVC S
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSL--QKEICESANSTIEVAYTGMCCDTNCPSDFSPVCDSK 829
Query: 313 GKTYANKCSLECTQKIIPS-----LKMEHDGECQGAKLASLHPCICTREKDPVCGSDGVT 477
G T+ N C + I L ++ C K + C +E PVC S+G
Sbjct: 830 GSTHQNICHFGVKRCIAERTFGDVLTIDKFEVCNEVKECN---NACPKEYSPVCASNGQN 886
Query: 478 YSNLCLL-KMRLL 513
N C L K+R L
Sbjct: 887 IVNECELDKIRCL 899
Score = 50.8 bits (116), Expect = 7e-07
Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Frame = +1
Query: 133 CGKIYSPVCGSDGK-TYENPCEF---YCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPV 300
C + +PVC DG T+ N C F CE ++ + ++I + C + C A V
Sbjct: 974 CDEDKTPVC--DGTITHPNICRFRIAQCEAERVNKTLSIAYSGECCLLPKGECESSGA-V 1030
Query: 301 CGSNGKTYANKCSLE---CTQKIIP--SLKMEHDGECQGAKLASLHPCICTREKDPVCGS 465
C S G+T+ N C + C + I +L + H GEC LAS C + PVC S
Sbjct: 1031 CDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGEC--CALAS-----CPKTGQPVCDS 1083
Query: 466 DGVTYSNLC 492
G T+ +LC
Sbjct: 1084 RGRTHDSLC 1092
Score = 46.8 bits (106), Expect = 1e-05
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 12/149 (8%)
Frame = +1
Query: 142 IYSPVCGSDGKTYENPC---EFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSN 312
++SPVC ++G T+ N C + C + K + V PC + PVC
Sbjct: 928 VFSPVCDTEGVTHANMCLMDQNACIQMKKNKKTIQVSYQGQCCNQPC--DEDKTPVCDGT 985
Query: 313 GKTYANKCSLECTQ----KIIPSLKMEHDGECQGAKLASLHPCICTREKDPVCGSDGVTY 480
T+ N C Q ++ +L + + GEC L P VC S+G T+
Sbjct: 986 -ITHPNICRFRIAQCEAERVNKTLSIAYSGEC------CLLPKGECESSGAVCDSEGQTH 1038
Query: 481 SNLCLLKMR-----LLSKPSLSIEHTGPC 552
N C+ + R +S+ +L+I HTG C
Sbjct: 1039 MNHCVYQQRRCMAQTISQKTLNIVHTGEC 1067
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +1
Query: 277 CTLEYAPVCGSNGKTYANKCSLECTQKIIPS----LKMEHDGECQGAKLASLHPCICTRE 444
C + PVC S G + N C ++ I S + + + C +K A PC T +
Sbjct: 537 CPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCI-SKEACQMPC--TDD 593
Query: 445 KDPVCGSDGVTYSNLCLLKMRLLSKPSLSIEHTGPC 552
K P+C SD TY NLC + + L + G C
Sbjct: 594 KHPICASDFSTYENLCQFRKQKCLDSELEVLFKGKC 629
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 124 LCICGKIYSPVCGSDGKTYENPCEFY---CEKDKTHSNMTIVKNTACEVGIPCYCTLEYA 294
L C K PVC S G+T+++ C F+ C DK H+ T + P CT E +
Sbjct: 1070 LASCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKCCPAGCTDELS 1129
Query: 295 PVCGSNGKTYANKC 336
+C + Y N C
Sbjct: 1130 VICDQHENIYRNSC 1143
Score = 44.8 bits (101), Expect = 5e-05
Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Frame = +1
Query: 151 PVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACE-VGIPCYCTLEYAP----VCGSNG 315
P+C SD TYEN C+F +K + K E + PC E +P VC +
Sbjct: 596 PICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSECLDSPCALPAENSPDESFVCLEDQ 655
Query: 316 KTYANKCSLECTQKIIP-----SLKMEHDGECQGAKLASLHPCICTREKDPVCGSDGVTY 480
T + C + I +L +++ G C + C T + DPVC G T+
Sbjct: 656 ST-KSLCEYQMLSCIFERGYGVNLTVQYIGVC----CPPVESC-DTEKPDPVCTDSGATF 709
Query: 481 SNLCLL-----KMRLLSKPSLSIEHTGPCDNN 561
C L K++ L +P L + G C+ +
Sbjct: 710 LTECELNIENCKLKKLDQPKLVVVSQGICEKD 741
Score = 43.2 bits (97), Expect = 1e-04
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Frame = +1
Query: 151 PVCGSDGKTYENPCEFYCEK----DKTHS-NMTIVKNTACEVGIPCYCTLEYAPVCGSNG 315
PVC S G + N CEF + K H ++ +N + CT + P+C S+
Sbjct: 543 PVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISKEACQMPCTDDKHPICASDF 602
Query: 316 KTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDP----VCGSDGVTYS 483
TY N C + + L++ G+C L S PC E P VC D T S
Sbjct: 603 STYENLCQFRKQKCLDSELEVLFKGKCSEC-LDS--PCALPAENSPDESFVCLEDQSTKS 659
Query: 484 NLCLLKM 504
LC +M
Sbjct: 660 -LCEYQM 665
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +1
Query: 433 CTREKDPVCGSDGVTYSNLCLLKMRLLSKPSLSIE--HTGP-CDNN 561
C DP+CG++GVT++N C L+ + + +IE +TG CD N
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN 817
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 427 CICTREKDPVCGSDGVTYSNLCLLKMRLLSKPSLSIEHTGPC 552
C C PVCG+D VTY+NLC L+ + L + G C
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTC 60
Score = 37.5 bits (83), Expect = 0.007
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +1
Query: 154 VCGSDGKTYENPCEFYCEK--DKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSNGKTYA 327
VC S+G+T+ N C + + +T S T+ E C PVC S G+T+
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECCALASCPKTGQPVCDSRGRTHD 1089
Query: 328 NKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPVCGSDGVTYSNLCLLKMR 507
+ C ++ I + ++ + P CT E +C Y N C ++
Sbjct: 1090 SLCHFHNSKCIFDKIHTQNTTLTLDYQ-GKCCPAGCTDELSVICDQHENIYRNSCYFNLK 1148
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 61.3 bits (142), Expect = 5e-10
Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 9/155 (5%)
Frame = +1
Query: 115 PPPLCICGKIYSPVCGSDGK---TYENPCEFYCEKDKTHSNMTIVKNTACEVGIPCYCTL 285
P C C PVC +G TY N C F C ++ + + + + C YC +
Sbjct: 21 PNSTCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR---YCNM 77
Query: 286 EYAPVCGSNGKTYANKCSLECTQKIIPSLKMEH-DGECQGAKLASLHPCICTREKDPVCG 462
PVC S G+ Y C E Q I L H + K + P C E +PVC
Sbjct: 78 FEQPVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSCTAP--CPTEWNPVCD 134
Query: 463 SDGVTYSNLC-LLKMRLLSK----PSLSIEHTGPC 552
G T++N C L + K SL ++++G C
Sbjct: 135 KKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVC 169
Score = 56.8 bits (131), Expect = 1e-08
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Frame = +1
Query: 133 CGKIYSPVCGSDGKTYENPCEF---YCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVC 303
C PVC S+G+ Y+ CEF C + K N + ++ + C E+ PVC
Sbjct: 75 CNMFEQPVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSCTAPCPTEWNPVC 133
Query: 304 GSNGKTYANKCSL---ECTQK--IIPSLKMEHDGECQGAKLASLHPCICTREKDPVCGSD 468
G+T+AN C+ +C K + SL++++ G C C + VC S+
Sbjct: 134 DKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVC------CEDMCSAGQTSLTVCDSE 187
Query: 469 GVTYSNLC---LLKMRL----LSKPSLSIEHTGPC 552
G T++++C + K R + K L I GPC
Sbjct: 188 GNTHTDICSFYIAKCRQMRRGIGKKRLQIAGVGPC 222
Score = 34.3 bits (75), Expect = 0.067
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 427 CICTREKDPVCGSDG---VTYSNLCLLKMRLLSKPSLSIEHTGPCDNNR 564
C C E DPVC +G TYSN C+ + +K L + + G C + R
Sbjct: 25 CSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR 73
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 124 LCICGKIYSPVCGSDGKTYENPCEFYCEK 210
+C G+ VC S+G T+ + C FY K
Sbjct: 173 MCSAGQTSLTVCDSEGNTHTDICSFYIAK 201
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 55.6 bits (128), Expect = 3e-08
Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 48/182 (26%)
Frame = +1
Query: 154 VCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTAC-EVGIPCY------------------ 276
VCG+DGKTY N C K ++ + K C E G PC
Sbjct: 330 VCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCVVKPDRTA 389
Query: 277 -------CTLEYAPVCGSNGKTYANKCSLE---CTQKIIPSLKMEHDGECQGAKLASLHP 426
C PVC +NG+T+ N+C ++ C K + +K++H G C A+
Sbjct: 390 ECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDS 447
Query: 427 C------------------ICTREKDPVCGSDGVTYSNLCLLK-MRLLSKPSLSIEHTGP 549
C CT E VCGSDG TYSN C L+ +++ ++ +++
Sbjct: 448 CKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSA 507
Query: 550 CD 555
C+
Sbjct: 508 CE 509
Score = 53.6 bits (123), Expect = 1e-07
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 47/170 (27%)
Frame = +1
Query: 133 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGI--------------- 267
C + PVC ++G+T++N CE + +T S + + C +G+
Sbjct: 397 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSCKKPQVCVV 456
Query: 268 -----PCY---CTLEYAPVCGSNGKTYANKCSLECTQKII-PSLKMEHDGECQGAKLA-- 414
C CT E+ VCGS+GKTY+N+C L+ + ++ ++++ C+ KL
Sbjct: 457 VDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKE 516
Query: 415 -------------SLHPCIC--------TREKDPVCGSDGVTYSNLCLLK 501
C C E VCG+DGVTYS+ C +K
Sbjct: 517 KCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMK 566
Score = 48.8 bits (111), Expect = 3e-06
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 45/180 (25%)
Frame = +1
Query: 148 SPVCGSDGKTYENPCEFYCEKDKTHSNMTI--------------VKNTACEVGI----PC 273
SPVC S G Y++ C ++ +N+T+ C++G+ C
Sbjct: 258 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC 317
Query: 274 ----YCTLEYAPVCGSNGKTYANKCSLE-----------------CTQKIIPSLKMEHD- 387
CT+ A VCG++GKTY N+C L+ C + P KME
Sbjct: 318 KCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGF 377
Query: 388 -GEC--QGAKLASLH-PCICTREKDPVCGSDGVTYSNLCLLKMRLL-SKPSLSIEHTGPC 552
G C + + A P C PVC ++G T+ N C +K + +K + ++H G C
Sbjct: 378 WGSCVVKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 437
Score = 43.6 bits (98), Expect = 1e-04
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 47/180 (26%)
Frame = +1
Query: 121 PLCICGKI---YSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTA------------- 252
P C+C + VCGSDGKTY N C N+ + N+A
Sbjct: 461 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDF 520
Query: 253 ---CEVG------------IPCYCTLEYAPVCGSNGKTYANKCSLE---CTQK--IIPSL 372
C VG P Y E VCG++G TY+++C ++ C Q ++ +
Sbjct: 521 YSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAF 580
Query: 373 KMEHDG----ECQGAKLASLHPCICTRE--KDP-----VCGSDGVTYSNLCLLKMRLLSK 519
+ + D +C+ + C+C+ +P +CG +GV Y +LC L++ K
Sbjct: 581 EGKCDECLHVQCRYGEECRSGVCVCSYNCPANPPLSARICGENGVLYPSLCHLQLASCQK 640
Score = 42.3 bits (95), Expect = 3e-04
Identities = 41/149 (27%), Positives = 57/149 (38%), Gaps = 25/149 (16%)
Frame = +1
Query: 184 NPCE-FYCEKDK----THSNMTIVKNTACEVGIPCYC-TLEYAPVCGSNGKTYANKCSLE 345
NPCE C + N ++ C P Y ++E +PVC S+G Y + C L
Sbjct: 216 NPCEDLRCGPGEDCVVNQINGILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHLR 275
Query: 346 ---CTQKIIPSLK-MEHDGECQGAKLASLHPC--------------ICTREKDPVCGSDG 471
C K ++K C G K + C CT VCG+DG
Sbjct: 276 HHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPECKCSEQCTMNSAHVCGTDG 335
Query: 472 VTYSNLCLLKMRLL-SKPSLSIEHTGPCD 555
TY N C LK+ + + + G CD
Sbjct: 336 KTYLNECFLKLAACKEQKDILVWKRGNCD 364
Score = 37.9 bits (84), Expect = 0.005
Identities = 43/161 (26%), Positives = 60/161 (37%), Gaps = 46/161 (28%)
Frame = +1
Query: 154 VCGSDGKTYENPCEFYCEKDKTHSNMTIVK----------NTACEVGIPC---YCTLEY- 291
VCG+DG TY + C + +K H + ++ + C G C C Y
Sbjct: 551 VCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYN 608
Query: 292 --------APVCGSNGKTYANKCSLECT--QKIIPSLKMEHDGECQGAKL---------- 411
A +CG NG Y + C L+ QK P +M C +K
Sbjct: 609 CPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPDFKVRRP 667
Query: 412 ------ASLHPCICT------REKDPVCGSDGVTYSNLCLL 498
A+ H CT P+CGSDG+ Y+N C L
Sbjct: 668 CACYFGATCHNWACTCPTCNLSSNYPICGSDGIVYNNQCHL 708
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1
Query: 454 VCGSDGVTYSNLCLLKM 504
VCGSDG TYSNLC LKM
Sbjct: 880 VCGSDGTTYSNLCELKM 896
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 433 CTREKDPVCGSDGVTYSNLCLLKMR--LLSKPS--LSIEHTGPC 552
C D VCGSD V+YS+ C L +R +L+K L + GPC
Sbjct: 169 CRVVTDVVCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPC 212
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 121 PLCICGKIYSPVCGSDGKTYENPC 192
P C Y P+CGSDG Y N C
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQC 706
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 154 VCGSDGKTYENPCE 195
VCGSDG TY N CE
Sbjct: 880 VCGSDGTTYSNLCE 893
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 298 VCGSNGKTYANKCSLE 345
VCGS+G TY+N C L+
Sbjct: 880 VCGSDGTTYSNLCELK 895
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 55.6 bits (128), Expect = 3e-08
Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 48/182 (26%)
Frame = +1
Query: 154 VCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTAC-EVGIPCY------------------ 276
VCG+DGKTY N C K ++ + K C E G PC
Sbjct: 338 VCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCVVKPDRTA 397
Query: 277 -------CTLEYAPVCGSNGKTYANKCSLE---CTQKIIPSLKMEHDGECQGAKLASLHP 426
C PVC +NG+T+ N+C ++ C K + +K++H G C A+
Sbjct: 398 ECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDS 455
Query: 427 C------------------ICTREKDPVCGSDGVTYSNLCLLK-MRLLSKPSLSIEHTGP 549
C CT E VCGSDG TYSN C L+ +++ ++ +++
Sbjct: 456 CKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSA 515
Query: 550 CD 555
C+
Sbjct: 516 CE 517
Score = 53.6 bits (123), Expect = 1e-07
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 47/170 (27%)
Frame = +1
Query: 133 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGI--------------- 267
C + PVC ++G+T++N CE + +T S + + C +G+
Sbjct: 405 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSCKKPQVCVV 464
Query: 268 -----PCY---CTLEYAPVCGSNGKTYANKCSLECTQKII-PSLKMEHDGECQGAKLA-- 414
C CT E+ VCGS+GKTY+N+C L+ + ++ ++++ C+ KL
Sbjct: 465 VDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKE 524
Query: 415 -------------SLHPCIC--------TREKDPVCGSDGVTYSNLCLLK 501
C C E VCG+DGVTYS+ C +K
Sbjct: 525 KCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMK 574
Score = 48.8 bits (111), Expect = 3e-06
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 45/180 (25%)
Frame = +1
Query: 148 SPVCGSDGKTYENPCEFYCEKDKTHSNMTI--------------VKNTACEVGI----PC 273
SPVC S G Y++ C ++ +N+T+ C++G+ C
Sbjct: 266 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC 325
Query: 274 ----YCTLEYAPVCGSNGKTYANKCSLE-----------------CTQKIIPSLKMEHD- 387
CT+ A VCG++GKTY N+C L+ C + P KME
Sbjct: 326 KCSEQCTMNSAHVCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGF 385
Query: 388 -GEC--QGAKLASLH-PCICTREKDPVCGSDGVTYSNLCLLKMRLL-SKPSLSIEHTGPC 552
G C + + A P C PVC ++G T+ N C +K + +K + ++H G C
Sbjct: 386 WGSCVVKPDRTAECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTC 445
Score = 43.6 bits (98), Expect = 1e-04
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 47/180 (26%)
Frame = +1
Query: 121 PLCICGKI---YSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTA------------- 252
P C+C + VCGSDGKTY N C N+ + N+A
Sbjct: 469 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDF 528
Query: 253 ---CEVG------------IPCYCTLEYAPVCGSNGKTYANKCSLE---CTQK--IIPSL 372
C VG P Y E VCG++G TY+++C ++ C Q ++ +
Sbjct: 529 YSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAF 588
Query: 373 KMEHDG----ECQGAKLASLHPCICTRE--KDP-----VCGSDGVTYSNLCLLKMRLLSK 519
+ + D +C+ + C+C+ +P +CG +GV Y +LC L++ K
Sbjct: 589 EGKCDECLHVQCRYGEECRSGVCVCSYNCPANPPLSARICGENGVLYPSLCHLQLASCQK 648
Score = 42.3 bits (95), Expect = 3e-04
Identities = 41/149 (27%), Positives = 57/149 (38%), Gaps = 25/149 (16%)
Frame = +1
Query: 184 NPCE-FYCEKDK----THSNMTIVKNTACEVGIPCYC-TLEYAPVCGSNGKTYANKCSLE 345
NPCE C + N ++ C P Y ++E +PVC S+G Y + C L
Sbjct: 224 NPCEDLRCGPGEDCVVNQINGILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHLR 283
Query: 346 ---CTQKIIPSLK-MEHDGECQGAKLASLHPC--------------ICTREKDPVCGSDG 471
C K ++K C G K + C CT VCG+DG
Sbjct: 284 HHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPECKCSEQCTMNSAHVCGTDG 343
Query: 472 VTYSNLCLLKMRLL-SKPSLSIEHTGPCD 555
TY N C LK+ + + + G CD
Sbjct: 344 KTYLNECFLKLAACKEQKDILVWKRGNCD 372
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1
Query: 454 VCGSDGVTYSNLCLLKM 504
VCGSDG TYSNLC LKM
Sbjct: 819 VCGSDGTTYSNLCELKM 835
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 433 CTREKDPVCGSDGVTYSNLCLLKMR--LLSKPS--LSIEHTGPC 552
C D VCGSD V+YS+ C L +R +L+K L + GPC
Sbjct: 177 CRVVTDVVCGSDHVSYSSFCHLSVRSCVLAKNGVRLRVATKGPC 220
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 154 VCGSDGKTYENPCE 195
VCGSDG TY N CE
Sbjct: 819 VCGSDGTTYSNLCE 832
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 298 VCGSNGKTYANKCSLE 345
VCGS+G TY+N C L+
Sbjct: 819 VCGSDGTTYSNLCELK 834
>U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical
protein C16B8.2 protein.
Length = 615
Score = 31.5 bits (68), Expect = 0.47
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +1
Query: 295 PVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGA-KLASLHPCICTREKDPVCGSDG 471
P+CG N NK + Q + + E+D EC + + L C C G
Sbjct: 140 PICGKNCFVALNKNGCQDCQCLWLAQDCENDEECSASNQYCDLGKCNCRDGYQQNMSKSG 199
Query: 472 VTYSNLCLLKMRLLSKPSLS--IEHTGPCDNN 561
N + + SKP LS +E G CD N
Sbjct: 200 AIPENE-FKRNKRESKPRLSERLEWPGVCDKN 230
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 31.5 bits (68), Expect = 0.47
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 127 CICGKIYS-PVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACE 258
C C + PVC +DG Y +PC C + + ++ +CE
Sbjct: 528 CSCENAHLYPVCSADGTAYFSPCHAGCREATQFGSDPVIGFASCE 572
>AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical
protein Y70G10A.3 protein.
Length = 690
Score = 31.1 bits (67), Expect = 0.62
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 271 CYCTLEYAPVCGSN-GKTYANKCSLECT 351
C+C +E+ PVC N G Y + C CT
Sbjct: 457 CHCKMEWNPVCDRNTGHMYYSACHAGCT 484
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 30.3 bits (65), Expect = 1.1
Identities = 30/111 (27%), Positives = 40/111 (36%), Gaps = 2/111 (1%)
Frame = +1
Query: 226 NMTIVKNTACEVGIPCYCTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGA 405
N T+ N C G V S G+T C P ++ H G C
Sbjct: 290 NETMPYNYYCFCGRMRNPNFRVGEVPHSCGETCGGARKFGCPH---PCTELCHPGPCIEC 346
Query: 406 KLASLHPCICTREKDPV-CGSD-GVTYSNLCLLKMRLLSKPSLSIEHTGPC 552
KL + C C + K V CGSD V +C ++ I H+G C
Sbjct: 347 KLFTTKSCNCGKTKKSVRCGSDQEVMCETVCGKQLSCGQHNCERICHSGDC 397
>Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 247 TACEVGIPCYCTLEYAPVCGSNGK-TYANKCSLECTQK 357
TAC PC T E C NG +Y KC + C+Q+
Sbjct: 529 TACRHAGPCNATAENC-ACRENGVCSYMCKCDINCSQR 565
>Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 247 TACEVGIPCYCTLEYAPVCGSNGK-TYANKCSLECTQK 357
TAC PC T E C NG +Y KC + C+Q+
Sbjct: 529 TACRHAGPCNATAENC-ACRENGVCSYMCKCDINCSQR 565
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 127 CICGKIYSPVCGSDGK-TYENPCEFYC 204
C C ++PVC D K T+ +PC C
Sbjct: 449 CHCDSFFNPVCSEDSKLTFLSPCHAGC 475
>AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effect
sterile 2 protein.
Length = 773
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 247 TACEVGIPCYCTLEYAPVCGSNGK-TYANKCSLECTQK 357
TAC PC T E C NG +Y KC + C+Q+
Sbjct: 529 TACRHAGPCNATAENC-ACRENGVCSYMCKCDINCSQR 565
>Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical
protein ZK896.1 protein.
Length = 479
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 299 TGAYSKVQ*QGMPTSHAVFFTIVILLCVLSF 207
TGA+ + Q TS+ + FTIV+ +C+ F
Sbjct: 448 TGAFVSFEFQKSATSNGILFTIVLTICMAIF 478
>U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical
protein F47E1.2 protein.
Length = 744
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 127 CICGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACE 258
C ++Y PVC G Y +PC C + + + ++ T+C+
Sbjct: 538 CENARLY-PVCDQTGFAYFSPCHAGCREAMQYGSDPVLDFTSCQ 580
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +1
Query: 277 CTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPV 456
CTLE P C +C+ +C Q P + + CQ +A P I T E P
Sbjct: 226 CTLECQPTCQQAVPQCQQQCAPQCQQPSAPQCQ-QCQSACQSPVVA---PQIITLEVVPQ 281
Query: 457 C 459
C
Sbjct: 282 C 282
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 28.3 bits (60), Expect = 4.4
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Frame = +1
Query: 160 GSDGKTYENPC-EFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSN-----GKT 321
G +GK + + YCE K + T CE +P C + CG N G
Sbjct: 320 GDNGKCIVSQSGQQYCECKKCEFS-----GTNCETTLPDPCQSKQKRACGQNALSPYGVC 374
Query: 322 YANKCSLEC-TQKIIPSLKMEHDGEC 396
Y N CS +C + P K D C
Sbjct: 375 YKNICSDQCFSCACSPGAKSPPDQSC 400
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 28.3 bits (60), Expect = 4.4
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Frame = +1
Query: 160 GSDGKTYENPC-EFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSN-----GKT 321
G +GK + + YCE K + T CE +P C + CG N G
Sbjct: 323 GDNGKCIVSQSGQQYCECKKCEFS-----GTNCETTLPDPCQSKQKRACGQNALSPYGVC 377
Query: 322 YANKCSLEC-TQKIIPSLKMEHDGEC 396
Y N CS +C + P K D C
Sbjct: 378 YKNICSDQCFSCACSPGAKSPPDQSC 403
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical protein
T01G1.3 protein.
Length = 1083
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +2
Query: 242 KTPHARWASPATVPWNMPPSVALTEKLTPTNVHWN--APKRLYRL*RWNMMANARELNWR 415
+TP P T+P NMPPS + + P WN P L N E+NW+
Sbjct: 848 QTPSWDHKPPPTMPANMPPS----KPVAPVTPGWNDPPPMALKPTTVAQPKQNVMEINWK 903
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical protein
T01G1.3 protein.
Length = 1083
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +2
Query: 242 KTPHARWASPATVPWNMPPSVALTEKLTPTNVHWN--APKRLYRL*RWNMMANARELNWR 415
+TP P T+P NMPPS + + P WN P L N E+NW+
Sbjct: 848 QTPSWDHKPPPTMPANMPPS----KPVAPVTPGWNDPPPMALKPTTVAQPKQNVMEINWK 903
>Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical
protein B0250.4 protein.
Length = 480
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 292 HIPRYSSRGCPPRMRCFSRLSYCCVSCPFRSKIHTGSRTSYH 167
HI Y C P + SR +Y C CP R T S ++H
Sbjct: 248 HIMMYHLYICHPEQKMESRPTYFCDRCPMR--FGTESALNFH 287
>AL032621-2|CAA21491.2| 147|Caenorhabditis elegans Hypothetical
protein Y45F3A.4 protein.
Length = 147
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 427 CICTREKDPVCGSDGV--TYSNLCLLKMRLLSKPSLSIEHT 543
C CT+E + V +DGV T + CL +L PS+ I +T
Sbjct: 27 CKCTKESETVTCTDGVCETENGSCL----MLDHPSMGIHYT 63
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +1
Query: 274 YCTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCI--CTREK 447
+C LE P C +C+ +C Q P + + CQ + CI C +
Sbjct: 203 HCNLECQPTCQQAVSQCQQQCAPQCQQPSAPQCQ-QCQSSCQQTQQCQ-QQCIPLCNQPS 260
Query: 448 DPVC 459
P C
Sbjct: 261 APAC 264
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = -1
Query: 343 PVNICWRKFFR*SHRRGHIPRYSSRGCPPRMRCFSR----LSYCCVSCPFRSKIHTGSRT 176
PVN W + R+G R C F+ YC +CP ++H+ RT
Sbjct: 243 PVNTWWFDY-----RKGECKRAEHSNCEEHFNSFANQEQCADYCVGTCPNNLEVHSNPRT 297
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,358,447
Number of Sequences: 27780
Number of extensions: 355648
Number of successful extensions: 1063
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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