BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_H11 (592 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein. 27 0.45 AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 24 3.2 AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 23 7.4 AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 23 9.8 AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 23 9.8 AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 23 9.8 AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 23 9.8 >EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein. Length = 481 Score = 27.1 bits (57), Expect = 0.45 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +1 Query: 10 VYALKALGKGSVFDKEDALKNL 75 V ALK LG S+FD+ AL+NL Sbjct: 383 VPALKHLGLRSIFDRASALQNL 404 >AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-specific zinc-fingerC isoform protein. Length = 569 Score = 24.2 bits (50), Expect = 3.2 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%) Frame = -1 Query: 127 QKRTHS*QENHPSSTTV*GSLKHPLYQ----TRNLSLELLK 17 Q++TH Q+ HPSS S +HP Q +R+ S++L++ Sbjct: 249 QQQTHHQQQQHPSSHQQ-QSQQHPSSQHQQPSRSASIDLMQ 288 >AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase protein. Length = 1222 Score = 23.0 bits (47), Expect = 7.4 Identities = 11/32 (34%), Positives = 14/32 (43%) Frame = +2 Query: 116 GTFLPYANTWDAARGLLLMRRVCCWPLMKLIP 211 GTF + WDAA R W ++IP Sbjct: 878 GTFQEWQRAWDAAAAAPTASRYAVW-AHRMIP 908 >AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific transcription factor FRU-MA protein. Length = 960 Score = 22.6 bits (46), Expect = 9.8 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 127 QKRTHS*QENHPSSTTV*GSLKHPLYQ 47 Q++TH Q+ HPSS S +HP Q Sbjct: 249 QQQTHHQQQQHPSSHQQ-QSQQHPSSQ 274 >AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific transcription factor FRU-MB protein. Length = 759 Score = 22.6 bits (46), Expect = 9.8 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 127 QKRTHS*QENHPSSTTV*GSLKHPLYQ 47 Q++TH Q+ HPSS S +HP Q Sbjct: 249 QQQTHHQQQQHPSSHQQ-QSQQHPSSQ 274 >AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-specific zinc-fingerC isoform protein. Length = 593 Score = 22.6 bits (46), Expect = 9.8 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 127 QKRTHS*QENHPSSTTV*GSLKHPLYQ 47 Q++TH Q+ HPSS S +HP Q Sbjct: 201 QQQTHHQQQQHPSSHQQ-QSQQHPSSQ 226 >AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase protein. Length = 1049 Score = 22.6 bits (46), Expect = 9.8 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +1 Query: 475 DSVEFSITDLIGRPVRSMKTEEVV 546 + VE TD +GR RSM+ ++V Sbjct: 708 EEVEMLATDAVGRIDRSMRDAKLV 731 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.314 0.132 0.370 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 606,952 Number of Sequences: 2352 Number of extensions: 11713 Number of successful extensions: 19 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 56768445 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (22.0 bits)
- SilkBase 1999-2023 -