Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_H11
         (592 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032637-15|CAA21616.2|  370|Caenorhabditis elegans Hypothetical...    29   1.9  
U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AY350451-1|AAQ54691.1|  332|Caenorhabditis elegans calcium/calmo...    27   7.5  
AF099924-1|AAF23187.1|  348|Caenorhabditis elegans Cam kinase pr...    27   7.5  
AC024880-3|AAF60915.3|  675|Caenorhabditis elegans Hypothetical ...    27   7.5  
AB021864-1|BAA82674.1|  348|Caenorhabditis elegans Ca2+/calmodul...    27   7.5  
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>AL032637-15|CAA21616.2|  370|Caenorhabditis elegans Hypothetical
           protein Y43F8C.16 protein.
          Length = 370

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = -3

Query: 584 TTTLSPSLVPD*ATTSSVFILRTGRPIRSVIENSTESDSDVTYFLPXIAMLIG-VGTSSA 408
           T+T++ + VP+ +TTS V    T  P  S I ++T  +S  +     +A     + TS+ 
Sbjct: 215 TSTITSTTVPESSTTSVVQSTTTAEP-TSTITSTTVPESSTSLLTSTLASTTTLIPTSTM 273

Query: 407 SVMAASSNRAA 375
           S +  +S+R +
Sbjct: 274 STITLTSDRTS 284


>U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical
           protein T20B12.1 protein.
          Length = 771

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
 Frame = +1

Query: 268 IRTYKEQKKPSPFSADQRYKFAEYL-LSRRSVNSAKGXXXXXXXXXXXXDDVPTPISIA- 441
           +R Y   KKPS  S++ R +F +Y+ L  +S+ +A G            + V T + +A 
Sbjct: 647 LRVYALLKKPSVLSSETRTEFEKYVRLLEKSLAAANGKLTWPKEEKLALEVVETAVRLAE 706

Query: 442 --XKGKKYVTSESDSVEFS 492
              +  K++ S++   E S
Sbjct: 707 DRLELAKFIASDTSVKEAS 725


>AY350451-1|AAQ54691.1|  332|Caenorhabditis elegans
           calcium/calmodulin-dependent proteinkinase 1 protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/28 (39%), Positives = 22/28 (78%)
 Frame = +1

Query: 10  VYALKALGKGSVFDKEDALKNLIQLLKK 93
           +YA+K + K ++  KE++L+N I++L+K
Sbjct: 32  MYAVKCIDKKALKGKEESLENEIKVLRK 59


>AF099924-1|AAF23187.1|  348|Caenorhabditis elegans Cam kinase
           protein 1 protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/28 (39%), Positives = 22/28 (78%)
 Frame = +1

Query: 10  VYALKALGKGSVFDKEDALKNLIQLLKK 93
           +YA+K + K ++  KE++L+N I++L+K
Sbjct: 48  MYAVKCIDKKALKGKEESLENEIKVLRK 75


>AC024880-3|AAF60915.3|  675|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.1 protein.
          Length = 675

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 46  FDKEDALKNLIQLLKKDDSPVNYGYVFALCE 138
           FDK +A  +L++ L  +D   NY  VF + E
Sbjct: 554 FDKFEAFSSLLEFLHGEDIYFNYNNVFKIIE 584


>AB021864-1|BAA82674.1|  348|Caenorhabditis elegans
           Ca2+/calmodulin-dependent proteinkinase I protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/28 (39%), Positives = 22/28 (78%)
 Frame = +1

Query: 10  VYALKALGKGSVFDKEDALKNLIQLLKK 93
           +YA+K + K ++  KE++L+N I++L+K
Sbjct: 48  MYAVKCIDKKALKGKEESLENEIKVLRK 75


>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
            F29G6.3b protein.
          Length = 1785

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/57 (26%), Positives = 23/57 (40%)
 Frame = +2

Query: 260  PRLLEHTKSRRNPRHLVQINDTSSQSTFCRVVQ*ILRRGLLYCLKLPSHLLMMCPHR 430
            PR+L HT+    P H +  N      T    +  I R+     + L  H +   PH+
Sbjct: 1604 PRILNHTQHHYTPSHQIVSNTYDDIDTHHGYLPQIPRKETAARVPLGHHFVPQIPHK 1660


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.314    0.132    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,419,759
Number of Sequences: 27780
Number of extensions: 264563
Number of successful extensions: 479
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)