Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_H11
         (592 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   5.2  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   6.8  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    21   6.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 238 AGHLRNEVTWNQFHQR 191
           AGH+R   T+ QFH +
Sbjct: 788 AGHVRLPYTFEQFHNK 803


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 238 AGHLRNEVTWNQFHQR 191
           AGH+R   T+ QFH +
Sbjct: 826 AGHVRLPYTFEQFHNK 841


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 544 PPPPFSYCGPD 512
           PPPP S  GPD
Sbjct: 344 PPPPPSSSGPD 354


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 166 THAEGVLLAADETDSKSLHFEGGLPVTSLLLSSIIRTY 279
           T AEG+  +++E  +  L  +GG     +LL   +  Y
Sbjct: 102 TQAEGIFGSSEECVALDLDGQGGRTFLRVLLHLAMHDY 139


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 166 THAEGVLLAADETDSKSLHFEGGLPVTSLLLSSIIRTY 279
           T AEG+  +++E  +  L  +GG     +LL   +  Y
Sbjct: 70  TQAEGIFGSSEECVALDLDGQGGRTFLRVLLHLAMHDY 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.132    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,253
Number of Sequences: 438
Number of extensions: 3471
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)