Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_H10
         (554 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.5  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 251 VLSSDGNYALSGSWDKTLRLWDL 319
           VLS  G   +S +W  +LR  D+
Sbjct: 260 VLSDHGTQFISNTWQNSLRAADI 282


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +2

Query: 71  TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF--IS 244
           T  G  G  T + TN     +IL       ++V+  + DET   +   +LY  + F  + 
Sbjct: 305 TYFGKTGRKTVLKTNKYCNFIILFYLSVFVILVYYASLDETPNPVTNGKLYNFNTFAKLL 364

Query: 245 DVVLSSDGNYALSGS 289
            +V+S  G +   G+
Sbjct: 365 ILVVSLSGTFGFFGT 379


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 309 FGILPLERQPGVSK 350
           F +LPL+ +PG+ K
Sbjct: 339 FELLPLDSEPGMLK 352


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,143
Number of Sequences: 336
Number of extensions: 3097
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)