BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_H10 (554 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 145 2e-35 At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 142 2e-34 At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 140 8e-34 At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 58 3e-09 At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 58 5e-09 At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 57 9e-09 At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 55 3e-08 At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 54 5e-08 At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 54 5e-08 At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 54 5e-08 At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 54 5e-08 At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 53 1e-07 At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 53 1e-07 At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 52 2e-07 At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 52 3e-07 At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 52 3e-07 At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 51 5e-07 At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 50 1e-06 At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 50 1e-06 At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 50 1e-06 At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 49 2e-06 At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 49 2e-06 At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 49 2e-06 At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 49 2e-06 At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 49 2e-06 At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 48 3e-06 At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 48 4e-06 At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 48 4e-06 At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 48 4e-06 At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 48 6e-06 At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 47 1e-05 At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 46 1e-05 At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 46 2e-05 At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 46 2e-05 At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 46 2e-05 At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 46 2e-05 At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 45 3e-05 At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 45 4e-05 At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 45 4e-05 At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 44 5e-05 At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 44 5e-05 At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 44 9e-05 At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 43 1e-04 At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 43 1e-04 At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 43 1e-04 At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 43 1e-04 At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 43 2e-04 At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 43 2e-04 At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 43 2e-04 At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 42 2e-04 At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 42 3e-04 At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 42 3e-04 At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 42 3e-04 At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 42 4e-04 At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 41 5e-04 At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 41 5e-04 At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 41 6e-04 At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 40 8e-04 At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 40 0.001 At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 40 0.001 At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 40 0.001 At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 40 0.001 At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 39 0.002 At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 39 0.002 At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 39 0.002 At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 39 0.002 At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 39 0.002 At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 39 0.003 At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 39 0.003 At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 38 0.003 At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 38 0.005 At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 38 0.005 At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 38 0.005 At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 38 0.006 At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 38 0.006 At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 38 0.006 At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 38 0.006 At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 37 0.008 At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 37 0.008 At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 37 0.008 At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 37 0.008 At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 37 0.008 At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 37 0.008 At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 37 0.008 At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 37 0.008 At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 37 0.010 At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 37 0.010 At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 37 0.010 At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 35 0.013 At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 36 0.014 At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 36 0.014 At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 36 0.014 At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 36 0.018 At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 36 0.024 At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 36 0.024 At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 36 0.024 At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 36 0.024 At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 36 0.024 At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 36 0.024 At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 36 0.024 At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 35 0.032 At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 35 0.042 At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 35 0.042 At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 35 0.042 At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 35 0.042 At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 35 0.042 At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 34 0.055 At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 34 0.055 At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 34 0.055 At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 34 0.055 At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 34 0.073 At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 34 0.073 At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 34 0.073 At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.073 At1g21650.1 68414.m02710 preprotein translocase secA family prot... 34 0.073 At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 33 0.097 At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 33 0.097 At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 33 0.097 At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 33 0.097 At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 33 0.097 At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 33 0.13 At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 33 0.13 At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 33 0.13 At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 33 0.13 At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 33 0.17 At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 32 0.22 At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 32 0.22 At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 32 0.22 At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 32 0.22 At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 32 0.30 At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 32 0.30 At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 32 0.30 At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 32 0.30 At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 32 0.30 At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 32 0.30 At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 32 0.30 At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 32 0.30 At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 31 0.39 At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 31 0.39 At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 31 0.39 At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 31 0.39 At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 31 0.52 At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 31 0.52 At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 31 0.52 At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 31 0.52 At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 31 0.52 At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 31 0.52 At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 31 0.52 At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 31 0.68 At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 31 0.68 At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 31 0.68 At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 31 0.68 At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 31 0.68 At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 31 0.68 At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 31 0.68 At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 30 0.90 At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 30 0.90 At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 30 0.90 At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 30 0.90 At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 30 0.90 At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 30 1.2 At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 30 1.2 At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 30 1.2 At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 30 1.2 At4g28620.1 68417.m04092 ABC transporter family protein identica... 29 1.6 At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 29 1.6 At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 29 2.1 At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 29 2.1 At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 29 2.1 At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 29 2.1 At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 29 2.1 At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 29 2.1 At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 29 2.1 At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 29 2.1 At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 29 2.1 At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 29 2.8 At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 29 2.8 At3g45370.1 68416.m04898 hypothetical protein 29 2.8 At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 29 2.8 At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 28 3.6 At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 28 3.6 At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 28 3.6 At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 28 3.6 At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 28 3.6 At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 28 3.6 At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 28 3.6 At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 28 3.6 At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 28 3.6 At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 28 3.6 At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 28 3.6 At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 28 3.6 At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 28 3.6 At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 28 4.8 At5g18420.3 68418.m02170 expressed protein non-consensus GC dono... 28 4.8 At5g18420.2 68418.m02169 expressed protein non-consensus GC dono... 28 4.8 At5g18420.1 68418.m02168 expressed protein non-consensus GC dono... 28 4.8 At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 28 4.8 At3g33230.1 68416.m04296 hypothetical protein 28 4.8 At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 27 6.4 At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 27 6.4 At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 27 6.4 At2g14340.1 68415.m01604 hypothetical protein 27 6.4 At1g79360.1 68414.m09248 transporter-related low similarity to S... 27 6.4 At1g54440.1 68414.m06210 3'-5' exonuclease domain-containing pro... 27 6.4 At5g40900.1 68418.m04966 expressed protein similar to GI:2827651... 27 8.4 At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 27 8.4 >At1g48630.1 68414.m05440 guanine nucleotide-binding family protein / activated protein kinase C receptor, putative / RACK, putative contains 7 WD-40 repeats (PF00400); very similar to guanine nucleotide-binding protein; activated protein kinase C receptor; RACK1 (GI:9294068) {Arabidopsis thaliana}; similar to WD-40 repeat auxin-dependent protein ARCA (SP:O24456) [Arabidopsis thaliana]; Length = 326 Score = 145 bits (352), Expect = 2e-35 Identities = 63/106 (59%), Positives = 84/106 (79%) Frame = +2 Query: 44 MSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLY 223 M+E L L+GT+C H +T IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+ Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT 60 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G++TRRF HTK Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTK 106 Score = 56.0 bits (129), Expect = 2e-08 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +2 Query: 80 GHNGWITQIATNPK-YPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVL 256 GH W++ + +P I+S+S DKT+ VW L + + L GHS +++ V + Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL-----RNTLAGHSGYLNTVAV 201 Query: 257 SSDGNYALSGSWDKTLRLWDLAAGK 331 S DG+ SG D + LWDLA GK Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGK 226 Score = 44.8 bits (101), Expect = 4e-05 Identities = 25/90 (27%), Positives = 44/90 (48%) Frame = +2 Query: 50 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 229 + KLR TL GH+G++ +A +P + S +D +++W L + Y L + H Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSLEAGSII-H 238 Query: 230 SHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 S + S Y L + + ++R+WDL Sbjct: 239 S------LCFSPNRYWLCAATENSIRIWDL 262 Score = 41.5 bits (93), Expect = 4e-04 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 307 I+S+SRD+T+ +W T E Y + + GH ++S V S + +S SWDKT++ Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEAD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176 Query: 308 LWDLAAGKTTRRFEDHT 358 +W+L K H+ Sbjct: 177 VWNLQNCKLRNTLAGHS 193 Score = 39.1 bits (87), Expect = 0.002 Identities = 22/81 (27%), Positives = 39/81 (48%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 + GH+ ++ + + LS S D L +W L E+ +R GH+ + V Sbjct: 59 MTGHSHFVQDVVLSSD-GQFALSGSWDGELRLWDLATGEST-----RRFVGHTKDVLSVA 112 Query: 254 LSSDGNYALSGSWDKTLRLWD 316 S+D +S S D+T++LW+ Sbjct: 113 FSTDNRQIVSASRDRTIKLWN 133 Score = 37.1 bits (82), Expect = 0.008 Identities = 18/23 (78%), Positives = 19/23 (82%) Frame = +1 Query: 484 GTHEDVLSVAFSVDNRQIVSGSR 552 G +DVLSVAFS DNRQIVS SR Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASR 125 >At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dependent protein (ARCA) / guanine nucleotide-binding protein beta subunit, putative identical to SP|O24456 Guanine nucleotide-binding protein beta subunit-like protein (WD-40 repeat auxin-dependent protein ARCA) {Arabidopsis thaliana}; contains 7 WD-40 repeats (PF00400) Length = 327 Score = 142 bits (343), Expect = 2e-34 Identities = 65/106 (61%), Positives = 82/106 (77%) Frame = +2 Query: 44 MSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLY 223 M+E L L+GT+ H +T IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT 60 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 GHSHF+ DVVLSSDG +ALSGSWD LRLWDLAAG +TRRF HTK Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK 106 Score = 58.0 bits (134), Expect = 4e-09 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 1/96 (1%) Frame = +2 Query: 80 GHNGWITQIATNPK-YPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVL 256 GH W++ + +P I+S+S DKT+ VW L+ + + L GH+ ++S V + Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL-----RSTLAGHTGYVSTVAV 202 Query: 257 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 364 S DG+ SG D + LWDLA GK E ++ + Sbjct: 203 SPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVI 238 Score = 41.9 bits (94), Expect = 3e-04 Identities = 22/87 (25%), Positives = 42/87 (48%) Frame = +2 Query: 59 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 238 KLR TL GH G+++ +A +P + S +D +++W L + Y L ++ Sbjct: 185 KLRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSL-------EANS 236 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWDL 319 + + S Y L + + +++WDL Sbjct: 237 VIHALCFSPNRYWLCAATEHGIKIWDL 263 Score = 38.7 bits (86), Expect = 0.003 Identities = 23/81 (28%), Positives = 38/81 (46%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GH+ ++ + + LS S D L +W L G+ +R GH+ + V Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLAA-----GVSTRRFVGHTKDVLSVA 112 Query: 254 LSSDGNYALSGSWDKTLRLWD 316 S D +S S D+T++LW+ Sbjct: 113 FSLDNRQIVSASRDRTIKLWN 133 Score = 37.5 bits (83), Expect = 0.006 Identities = 18/23 (78%), Positives = 20/23 (86%) Frame = +1 Query: 484 GTHEDVLSVAFSVDNRQIVSGSR 552 G +DVLSVAFS+DNRQIVS SR Sbjct: 103 GHTKDVLSVAFSLDNRQIVSASR 125 >At3g18130.1 68416.m02305 guanine nucleotide-binding family protein / activated protein kinase C receptor (RACK1) identical to guanine nucleotide-binding protein; activated protein kinase C receptor; RACK1 (GI:9294068) {Arabidopsis thaliana}; contains Pfam profile: PF00400 WD domain, G-beta repeat (7 copies) Length = 326 Score = 140 bits (338), Expect = 8e-34 Identities = 63/106 (59%), Positives = 82/106 (77%) Frame = +2 Query: 44 MSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLY 223 M+E L L+G + H +T IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT 60 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G+TTRRF HTK Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTK 106 Score = 56.4 bits (130), Expect = 1e-08 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +2 Query: 80 GHNGWITQIATNPK-YPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVL 256 GH W++ + +P I+S+S DKT+ VW L + + L GHS +++ V + Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL-----RNSLVGHSGYLNTVAV 201 Query: 257 SSDGNYALSGSWDKTLRLWDLAAGK 331 S DG+ SG D + LWDLA GK Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGK 226 Score = 42.7 bits (96), Expect = 2e-04 Identities = 24/90 (26%), Positives = 44/90 (48%) Frame = +2 Query: 50 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 229 + KLR +L GH+G++ +A +P + S +D +++W L + Y L + H Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSLEAGSII-H 238 Query: 230 SHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 S + S Y L + + ++R+WDL Sbjct: 239 S------LCFSPNRYWLCAATENSIRIWDL 262 Score = 41.5 bits (93), Expect = 4e-04 Identities = 24/81 (29%), Positives = 39/81 (48%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GH+ ++ + + LS S D L +W L ET +R GH+ + V Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLATGETT-----RRFVGHTKDVLSVA 112 Query: 254 LSSDGNYALSGSWDKTLRLWD 316 S+D +S S D+T++LW+ Sbjct: 113 FSTDNRQIVSASRDRTIKLWN 133 Score = 40.7 bits (91), Expect = 6e-04 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 307 I+S+SRD+T+ +W T E Y + + GH ++S V S + +S SWDKT++ Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176 Query: 308 LWDLAAGKTTRRFEDHT 358 +W+L K H+ Sbjct: 177 VWNLQNCKLRNSLVGHS 193 Score = 37.1 bits (82), Expect = 0.008 Identities = 18/23 (78%), Positives = 19/23 (82%) Frame = +1 Query: 484 GTHEDVLSVAFSVDNRQIVSGSR 552 G +DVLSVAFS DNRQIVS SR Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASR 125 >At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat family protein beta-transducin, Schizosaccharomyces pombe, EMBL:CAA17803 Length = 317 Score = 58.4 bits (135), Expect = 3e-09 Identities = 31/96 (32%), Positives = 48/96 (50%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 TL HN ++ + + ++ S+S DKT+ + + P + GH + ISDV Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 SSD + +S S DKTL+LWD+ G + HT Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHT 113 Score = 52.8 bits (121), Expect = 1e-07 Identities = 32/93 (34%), Positives = 51/93 (54%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH I+ +A + I+S+S DKTL +W + ET G K L GH+++ V + Sbjct: 69 GHENGISDVAFSSD-ARFIVSASDDKTLKLWDV---ET--GSLIKTLIGHTNYAFCVNFN 122 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 N +SGS+D+T+R+WD+ GK + H+ Sbjct: 123 PQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHS 155 Score = 36.7 bits (81), Expect = 0.010 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 1/102 (0%) Frame = +2 Query: 53 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHS 232 T K L H+ +T + N + +I+SSS D +W ++ G K L Sbjct: 144 TGKCLKVLPAHSDPVTAVDFN-RDGSLIVSSSYDGLCRIW-----DSGTGHCVKTLIDDE 197 Query: 233 HF-ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 + +S V S +G + L G+ D TLRLW++++ K + + H Sbjct: 198 NPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH 239 Score = 36.7 bits (81), Expect = 0.010 Identities = 22/60 (36%), Positives = 32/60 (53%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 313 I+S S D + +W+L + L QK L GH+ + +V N SGS DKT+R+W Sbjct: 258 IVSGSEDNCVHMWELNSKK----LLQK-LEGHTETVMNVACHPTENLIASGSLDKTVRIW 312 Score = 34.3 bits (75), Expect = 0.055 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 3/83 (3%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH---SHFISDVVLSSDGNYALSGSWDKTL 304 IL + D TL +W ++ + K GH + IS ++G +SGS D + Sbjct: 213 ILVGTLDNTLRLWNISSAKF-----LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267 Query: 305 RLWDLAAGKTTRRFEDHTKV*QN 373 +W+L + K ++ E HT+ N Sbjct: 268 HMWELNSKKLLQKLEGHTETVMN 290 >At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to U5 snRNP-specific 40 kDa protein (GI:3820594) [Homo sapiens] Length = 343 Score = 57.6 bits (133), Expect = 5e-09 Identities = 31/95 (32%), Positives = 52/95 (54%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GH + + NP +I S S D+ + +W++ D N+ + L GH + I D+ Sbjct: 49 LSGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMV----LKGHKNAILDLH 103 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 +SDG+ +S S DKT+R WD+ GK ++ +H+ Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHS 138 Score = 41.9 bits (94), Expect = 3e-04 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 4/100 (4%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 TL GH IT ++ +P +L++ D L VW + R K GH H Sbjct: 217 TLEGHQDTITGMSLSPD-GSYLLTNGMDNKLCVWDM-RPYAPQNRCVKIFEGHQHNFEKN 274 Query: 251 VL----SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 +L S DG +GS D+ + +WD + +T + HT Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHT 314 Score = 39.5 bits (88), Expect = 0.001 Identities = 25/102 (24%), Positives = 43/102 (42%) Frame = +2 Query: 50 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 229 ET K + H+ ++ + P +I+S S D T +W + + P K Sbjct: 126 ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDK----- 180 Query: 230 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 + I+ V S + +G D +++WDL G+ T E H Sbjct: 181 -YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGH 221 Score = 37.9 bits (84), Expect = 0.005 Identities = 21/64 (32%), Positives = 30/64 (46%) Frame = +2 Query: 128 DMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 307 D I + D + VW L + E L GH I+ + LS DG+Y L+ D L Sbjct: 193 DKIFTGGVDNDVKVWDLRKGEATMTLE-----GHQDTITGMSLSPDGSYLLTNGMDNKLC 247 Query: 308 LWDL 319 +WD+ Sbjct: 248 VWDM 251 Score = 35.9 bits (79), Expect = 0.018 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGN-YALSGSWDKTLRL 310 I+S+S DKT+ W + ET G K++ HS F++ + G +SGS D T +L Sbjct: 111 IVSASPDKTVRAWDV---ET--GKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKL 165 Query: 311 WDLAAGKTTRRFEDHTKV 364 WD+ + F D ++ Sbjct: 166 WDMRQRGAIQTFPDKYQI 183 >At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe] Length = 305 Score = 56.8 bits (131), Expect = 9e-09 Identities = 33/96 (34%), Positives = 51/96 (53%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L HNG I + +P + +SS DKT+ +W + + L +K L GH ++ D V Sbjct: 207 LQAHNGHILKCLLSPANKYLATASS-DKTVKIWNVD----GFKL-EKVLTGHQRWVWDCV 260 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 S DG + ++ S D T RLW + AGK + ++ H K Sbjct: 261 FSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHK 296 Score = 37.1 bits (82), Expect = 0.008 Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGL--PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 304 M+++++ T VW+L R + P +L H+ I +LS Y + S DKT+ Sbjct: 176 MVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTV 235 Query: 305 RLWDLAAGKTTRRFEDHTK 361 ++W++ K + H + Sbjct: 236 KIWNVDGFKLEKVLTGHQR 254 Score = 30.7 bits (66), Expect = 0.68 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 349 H++ + V D + SGS D T+++WDL A + +E Sbjct: 77 HTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYE 117 >At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat family protein similar to C. elegans putative WD-repeat protein C14B1.4 (SP:Q17963) Length = 333 Score = 55.2 bits (127), Expect = 3e-08 Identities = 35/82 (42%), Positives = 47/82 (57%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 TL GH I+ + + +++ S+S DKT+I+W T NY L R GHS ISD+ Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91 Query: 251 VLSSDGNYALSGSWDKTLRLWD 316 SSD +Y S S D TLR+WD Sbjct: 92 AWSSDSHYTCSASDDCTLRIWD 113 Score = 48.4 bits (110), Expect = 3e-06 Identities = 30/101 (29%), Positives = 52/101 (51%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH+ I+ +A + S+S D TL +W D + K L GH++F+ V + Sbjct: 83 GHSSGISDLAWSSD-SHYTCSASDDCTLRIW----DARSPYECLKVLRGHTNFVFCVNFN 137 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV*QNFYF 382 N +SGS+D+T+R+W++ GK R + H+ + +F Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHF 178 Score = 43.2 bits (97), Expect = 1e-04 Identities = 27/93 (29%), Positives = 45/93 (48%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GH ++ + NP ++I+S S D+T+ +W E G + + HS IS V Sbjct: 124 LRGHTNFVFCVNFNPP-SNLIVSGSFDETIRIW-----EVKTGKCVRMIKAHSMPISSVH 177 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED 352 + DG+ +S S D + ++WD G + D Sbjct: 178 FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLID 210 Score = 41.1 bits (92), Expect = 5e-04 Identities = 21/49 (42%), Positives = 26/49 (53%) Frame = +2 Query: 212 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 K L GH+ IS V S+DGN S S DKT+ LW R+E H+ Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHS 85 Score = 35.5 bits (78), Expect = 0.024 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 3/78 (3%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSH---FISDVVLSSDGNYALSGSWDKTL 304 IL ++ D TL KL+ T L K GH++ I+ ++G Y +SGS D + Sbjct: 228 ILVATLDSTL---KLSNYATGKFL--KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCV 282 Query: 305 RLWDLAAGKTTRRFEDHT 358 LWDL A +R E HT Sbjct: 283 YLWDLQARNILQRLEGHT 300 >At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless protein, putative similar to notchless [Xenopus laevis] GI:3687833; contains Pfam PF00400: WD domain, G-beta repeat (8 copies) Length = 473 Score = 54.4 bits (125), Expect = 5e-08 Identities = 26/77 (33%), Positives = 43/77 (55%) Frame = +2 Query: 125 PDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 304 P+ ++S S D T+ +W+ + + P+KRL GH ++ V S DG + S S+DK++ Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPDGKWIASASFDKSV 384 Query: 305 RLWDLAAGKTTRRFEDH 355 RLW+ G+ F H Sbjct: 385 RLWNGITGQFVTVFRGH 401 Score = 44.0 bits (99), Expect = 7e-05 Identities = 25/78 (32%), Positives = 41/78 (52%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH G + Q++ + ++LS S+D TL +W++ + LP GH+ + V S Sbjct: 400 GHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLP-----GHADEVFAVDWS 453 Query: 260 SDGNYALSGSWDKTLRLW 313 DG +SG D+ L+LW Sbjct: 454 PDGEKVVSGGKDRVLKLW 471 Score = 35.5 bits (78), Expect = 0.024 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +2 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 GH+ + V S DG SGS D T+RLWDL Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL 138 Score = 35.1 bits (77), Expect = 0.032 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 5/101 (4%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 T GH W+ +A +P ++ S S+ + W + E G P L GH +I+ + Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200 Query: 251 V-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 LSS ++ S D R+WD+ K+ HT Sbjct: 201 SWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHT 241 Score = 35.1 bits (77), Expect = 0.032 Identities = 27/94 (28%), Positives = 42/94 (44%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GH + + +P I S+S DK++ +W T + R GH + V Sbjct: 356 LTGHQQLVNHVYFSPD-GKWIASASFDKSVRLWN---GITGQFVTVFR--GHVGPVYQVS 409 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 S+D LSGS D TL++W++ K + H Sbjct: 410 WSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGH 443 Score = 32.3 bits (70), Expect = 0.22 Identities = 22/87 (25%), Positives = 39/87 (44%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 T+ GH + ++ +P + S S D T+ +W L + P GH +++ V Sbjct: 104 TIAGHAEAVLCVSFSPD-GKQLASGSGDTTVRLWDLYTET-----PLFTCKGHKNWVLTV 157 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAAGK 331 S DG + +SGS + W+ G+ Sbjct: 158 AWSPDGKHLVSGSKSGEICCWNPKKGE 184 Score = 31.5 bits (68), Expect = 0.39 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYAL-SGSWDKTLR 307 +I + S+D T+ +W ET G + L GH H+I+ + LS++ Y L +G++D T R Sbjct: 254 IIYTGSQDCTIKMW-----ETTQGKLIRELKGHGHWINSLALSTE--YVLRTGAFDHTGR 306 >At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta subunit (GB1) / GTP-binding protein beta subunit (AGB1) / transducin contains 7 WD-40 repeats (PF00400); identical to Guanine nucleotide-binding protein beta subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et al, PNAS 91:9954 (1994) Length = 347 Score = 54.4 bits (125), Expect = 5e-08 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%) Frame = +2 Query: 53 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHS 232 T+ + L GH G+++ P +++SS D+T I+W +T + GH+ Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204 Query: 233 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDH 355 + V +S S+ N+ +SGS D T RLWD AA + R F H Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 247 Score = 38.3 bits (85), Expect = 0.003 Identities = 24/92 (26%), Positives = 42/92 (45%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH + ++ + P+ +S S D T +W TR + + +GH ++ V Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 257 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 DG +GS D T RL+D+ G + ++ H Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289 >At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta subunit (GB1) / GTP-binding protein beta subunit (AGB1) / transducin contains 7 WD-40 repeats (PF00400); identical to Guanine nucleotide-binding protein beta subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et al, PNAS 91:9954 (1994) Length = 315 Score = 54.4 bits (125), Expect = 5e-08 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%) Frame = +2 Query: 53 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHS 232 T+ + L GH G+++ P +++SS D+T I+W +T + GH+ Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 142 Query: 233 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDH 355 + V +S S+ N+ +SGS D T RLWD AA + R F H Sbjct: 143 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 185 Score = 41.5 bits (93), Expect = 4e-04 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET--NYGLPQKRLYGHSHFISDVV 253 G NG +T IA + + + + T VW E + GL Q H + IS + Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 286 Query: 254 LSSDGNYALSGSWDKTLRLW 313 LS+DG+ +GSWD L++W Sbjct: 287 LSADGSALCTGSWDSNLKIW 306 Score = 38.3 bits (85), Expect = 0.003 Identities = 24/92 (26%), Positives = 42/92 (45%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH + ++ + P+ +S S D T +W TR + + +GH ++ V Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 195 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 DG +GS D T RL+D+ G + ++ H Sbjct: 196 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 227 >At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta subunit (GB1) / GTP-binding protein beta subunit (AGB1) / transducin contains 7 WD-40 repeats (PF00400); identical to Guanine nucleotide-binding protein beta subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et al, PNAS 91:9954 (1994) Length = 377 Score = 54.4 bits (125), Expect = 5e-08 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%) Frame = +2 Query: 53 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHS 232 T+ + L GH G+++ P +++SS D+T I+W +T + GH+ Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204 Query: 233 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDH 355 + V +S S+ N+ +SGS D T RLWD AA + R F H Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 247 Score = 41.5 bits (93), Expect = 4e-04 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET--NYGLPQKRLYGHSHFISDVV 253 G NG +T IA + + + + T VW E + GL Q H + IS + Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 348 Query: 254 LSSDGNYALSGSWDKTLRLW 313 LS+DG+ +GSWD L++W Sbjct: 349 LSADGSALCTGSWDSNLKIW 368 Score = 38.3 bits (85), Expect = 0.003 Identities = 24/92 (26%), Positives = 42/92 (45%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH + ++ + P+ +S S D T +W TR + + +GH ++ V Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 257 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 DG +GS D T RL+D+ G + ++ H Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289 >At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat family protein similar to Pop3 (GI:3434986) [Schizosaccharomyces pombe]; contains Pfam PF00400: WD domain, G-beta repeat (6 copies, 2 weak); Length = 312 Score = 52.8 bits (121), Expect = 1e-07 Identities = 33/96 (34%), Positives = 48/96 (50%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L HN I + +P + +SS DKT+ +W L + L +K L GH ++ D Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASS-DKTVKIWNLD----GFKL-EKVLTGHERWVWDCD 266 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 S DG Y ++ S D T RLW + AGK ++ H K Sbjct: 267 FSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRK 302 Score = 35.1 bits (77), Expect = 0.032 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Frame = +2 Query: 131 MILSSSRDKTLIVWK--LTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 304 M+++++ T VW+ R P +L H+ I +LS Y + S DKT+ Sbjct: 182 MVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTV 241 Query: 305 RLWDLAAGKTTRRFEDHTK 361 ++W+L K + H + Sbjct: 242 KIWNLDGFKLEKVLTGHER 260 Score = 30.7 bits (66), Expect = 0.68 Identities = 15/57 (26%), Positives = 26/57 (45%) Frame = +2 Query: 194 NYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 364 N +P + H+ + V G+ SGS D ++++WDL + R F + V Sbjct: 72 NPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPV 128 >At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80 subunit, putative similar to contains 6 WD-40 repeats (PF00400); katanin p80 subunit (GI:3005601) [Strongylocentrotus purpuratus] Length = 974 Score = 52.8 bits (121), Expect = 1e-07 Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 2/110 (1%) Frame = +2 Query: 32 GFIKM--SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL 205 G IK+ E K+ GH + + +P + + + S S D L VW D G Sbjct: 29 GVIKLWDLEESKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW----DTRKKGC 83 Query: 206 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 Q GH+ IS + S DG + +SG D +++WDL AGK F+ H Sbjct: 84 IQT-YKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCH 132 Score = 39.1 bits (87), Expect = 0.002 Identities = 24/97 (24%), Positives = 42/97 (43%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 +LCGH + +A N + ++L+ + + +W L + + GH S V Sbjct: 2 SLCGHTSPVDSVAFNSEEV-LVLAGASSGVIKLWDLEESKM-----VRAFTGHRSNCSAV 55 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 G + SGS D LR+WD + ++ HT+ Sbjct: 56 EFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTR 92 >At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2 (beta prime), putative contains 7 WD-40 repeats (PF00400) (1 weak); similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) [Homo sapiens]; similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus musculus] Length = 920 Score = 52.4 bits (120), Expect = 2e-07 Identities = 28/93 (30%), Positives = 45/93 (48%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH+ ++ Q+ NPK + S+S D+T+ +W L + N+ L L G + D Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHLKGVN--CVDYFTG 196 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 D Y ++GS D T ++WD + E HT Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229 Score = 44.0 bits (99), Expect = 7e-05 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 1/94 (1%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS- 259 H +I +A +P P +LSSS D + +W D L + GHSH++ V + Sbjct: 98 HADYIRCVAVHPTLP-YVLSSSDDMLIKLW----DWEKGWLCTQIFEGHSHYVMQVTFNP 152 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 D N S S D+T+++W+L + + H K Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLK 186 Score = 28.7 bits (61), Expect = 2.8 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 313 +++ S D T VW D Q L GH+H +S V + ++GS D T+R+W Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256 >At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80 subunit, putative contains 5 WD-40 repeats (PF00400); similar to katanin p80 subunit (GI:3005601) [Strongylocentrotus purpuratus] Length = 1180 Score = 52.0 bits (119), Expect = 3e-07 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 2/110 (1%) Frame = +2 Query: 32 GFIKM--SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL 205 G IK+ E K+ GH + + +P + + + S S D L +W + + G Sbjct: 80 GVIKLWDVEEAKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDANLKIWDIRKK----GC 134 Query: 206 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 Q GHS IS + + DG + +SG D +++WDL AGK F+ H Sbjct: 135 IQT-YKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFH 183 Score = 33.5 bits (73), Expect = 0.097 Identities = 20/97 (20%), Positives = 42/97 (43%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 +LCGH + +A + ++L+ + + +W + + + GH S V Sbjct: 53 SLCGHTSAVDSVAFDSAEV-LVLAGASSGVIKLWDVEEAKM-----VRAFTGHRSNCSAV 106 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 G + SGS D L++WD+ + ++ H++ Sbjct: 107 EFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSR 143 >At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat family protein similar to splicing factor hPRP17 (gi|3283220); contains 7 WD-40 repeats (PF00400);similar to ESTs emb|F15435 and dbj|AUO62661 Length = 573 Score = 52.0 bits (119), Expect = 3e-07 Identities = 27/96 (28%), Positives = 46/96 (47%) Frame = +2 Query: 59 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 238 +L T GH ++ I PK ++LS+ D + +W D N G + GH+ Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 346 + D+ S+DG+ L+ +DK ++ WD G+ F Sbjct: 329 VRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTF 364 Score = 30.7 bits (66), Expect = 0.68 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 2/96 (2%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH--SHFISDVVL 256 H + I+ +P + + + S D ++++ TR+ +KR GH + + V Sbjct: 454 HMHSMPSISVHPN-GNWLAAQSLDNQILIYS-TRERFQLN-KKKRFAGHIVAGYACQVNF 510 Query: 257 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 364 S DG + +SG + WD + K R + H V Sbjct: 511 SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGV 546 Score = 27.1 bits (57), Expect = 8.4 Identities = 13/75 (17%), Positives = 34/75 (45%) Frame = +2 Query: 92 WITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGN 271 ++ ++ + +++L+ DK ++ W + E Q H ++ + + Sbjct: 371 YVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ-----HLGAVNTITFVDNNR 425 Query: 272 YALSGSWDKTLRLWD 316 ++ S DK+LR+W+ Sbjct: 426 RFVTSSDDKSLRVWE 440 >At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2 (beta prime), putative contains 7 WD-40 repeats (PF00400) (1 weak); similar to (SP:O55029) Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus musculus]; similar to GI:298096 from [Homo sapiens] Length = 926 Score = 51.2 bits (117), Expect = 5e-07 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 2/95 (2%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFIS--DVV 253 GH+ ++ Q+ NPK + S+S D+T+ +W L + N+ L H ++ D Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-----AHQKGVNCVDYF 194 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 D Y ++GS D T ++WD + E HT Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229 Score = 44.8 bits (101), Expect = 4e-05 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 1/94 (1%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS- 259 H+ +I +A +P P +LSSS D + +W E + Q GHSH++ V + Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDW---EKGWACTQI-FEGHSHYVMQVTFNP 152 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 D N S S D+T+++W+L + + H K Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186 Score = 29.1 bits (62), Expect = 2.1 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 313 +++ S D T VW D Q L GH+H +S V + ++GS D T+R+W Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256 >At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2 (beta prime), putative contains 7 WD-40 repeats (PF00400) (1 weak); identical to coatomer protein complex, beta prime (beta'-COP) protein {Arabidopsis thaliana} (GI:9294445); similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) [Homo sapiens] Length = 918 Score = 50.0 bits (114), Expect = 1e-06 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFIS--DVV 253 GH+ ++ Q+ NPK + S+S D+T+ +W L + N+ L H ++ D Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-----AHQKGVNCVDYF 194 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 D Y ++GS D T ++WD + + HT Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229 Score = 47.2 bits (107), Expect = 7e-06 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS- 259 H+ +I +A +P P +LSSS D + +W D N + GHSH++ VV + Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLW----DWENGWACTQIFEGHSHYVMQVVFNP 152 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 D N S S D+T+++W+L + + H K Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186 Score = 28.7 bits (61), Expect = 2.8 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 313 +++ S D T VW D Q L GH+H +S V + ++GS D T+R+W Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256 >At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2 (beta prime), putative contains 7 WD-40 repeats (PF00400) (1 weak); identical to coatomer protein complex, beta prime (beta'-COP) protein {Arabidopsis thaliana} (GI:9294445); similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) [Homo sapiens] Length = 918 Score = 50.0 bits (114), Expect = 1e-06 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFIS--DVV 253 GH+ ++ Q+ NPK + S+S D+T+ +W L + N+ L H ++ D Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-----AHQKGVNCVDYF 194 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 D Y ++GS D T ++WD + + HT Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229 Score = 47.2 bits (107), Expect = 7e-06 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS- 259 H+ +I +A +P P +LSSS D + +W D N + GHSH++ VV + Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLW----DWENGWACTQIFEGHSHYVMQVVFNP 152 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 D N S S D+T+++W+L + + H K Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186 Score = 28.7 bits (61), Expect = 2.8 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 313 +++ S D T VW D Q L GH+H +S V + ++GS D T+R+W Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256 >At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2 (beta prime), putative contains 7 WD-40 repeats (PF00400) (1 weak); identical to coatomer protein complex, beta prime (beta'-COP) protein {Arabidopsis thaliana} (GI:9294445); similar to Coatomer beta' subunit (Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) [Homo sapiens] Length = 909 Score = 50.0 bits (114), Expect = 1e-06 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFIS--DVV 253 GH+ ++ Q+ NPK + S+S D+T+ +W L + N+ L H ++ D Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-----AHQKGVNCVDYF 194 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 D Y ++GS D T ++WD + + HT Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229 Score = 47.2 bits (107), Expect = 7e-06 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS- 259 H+ +I +A +P P +LSSS D + +W D N + GHSH++ VV + Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLW----DWENGWACTQIFEGHSHYVMQVVFNP 152 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 D N S S D+T+++W+L + + H K Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186 Score = 28.7 bits (61), Expect = 2.8 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 313 +++ S D T VW D Q L GH+H +S V + ++GS D T+R+W Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256 >At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regulator 1 (PRL1) identical to PP1/PP2A phosphatases pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis thaliana], PRL1 [Arabidopsis thaliana] GI:577733; contains Pfam PF00400: WD domain, G-beta repeat (7 copies) Length = 486 Score = 49.2 bits (112), Expect = 2e-06 Identities = 25/92 (27%), Positives = 43/92 (46%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH GW+ +A +P + + S D+T+ +W + G+ + L GH + + +S Sbjct: 174 GHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLAVS 227 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 + Y S DK ++ WDL K R + H Sbjct: 228 NRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGH 259 Score = 43.2 bits (97), Expect = 1e-04 Identities = 26/94 (27%), Positives = 40/94 (42%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH + +A +P D++L+ RD VW + + L GH + + V Sbjct: 258 GHLSGVYCLALHPTL-DVLLTGGRDSVCRVWDIRTKMQIFALS-----GHDNTVCSVFTR 311 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 ++GS D T++ WDL GKT H K Sbjct: 312 PTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKK 345 Score = 32.7 bits (71), Expect = 0.17 Identities = 11/37 (29%), Positives = 21/37 (56%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 328 + GH ++ V + +GS D+T+++WD+A G Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 208 Score = 30.7 bits (66), Expect = 0.68 Identities = 21/76 (27%), Positives = 30/76 (39%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GH+ + + T P P +++ S D T+ W L YG L H + + Sbjct: 298 LSGHDNTVCSVFTRPTDP-QVVTGSHDTTIKFWDL-----RYGKTMSTLTHHKKSVRAMT 351 Query: 254 LSSDGNYALSGSWDKT 301 L N S S D T Sbjct: 352 LHPKENAFASASADNT 367 Score = 29.5 bits (63), Expect = 1.6 Identities = 21/86 (24%), Positives = 40/86 (46%) Frame = +2 Query: 62 LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFI 241 L+ TL GH + +A + ++ M S+ DK + W L +++ + +GH + Sbjct: 210 LKLTLTGHIEQVRGLAVSNRHTYMF-SAGDDKQVKCWDLEQNKVI-----RSYHGHLSGV 263 Query: 242 SDVVLSSDGNYALSGSWDKTLRLWDL 319 + L + L+G D R+WD+ Sbjct: 264 YCLALHPTLDVLLTGGRDSVCRVWDI 289 >At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat family protein contains seven G-protein beta WD-40 repeats; similar to uncharacterized KIAA1449 protein (gi:7959157) [Homo sapiens] Length = 753 Score = 49.2 bits (112), Expect = 2e-06 Identities = 29/93 (31%), Positives = 44/93 (47%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH + +A N M++S +K L VW + G +L GH+ + ++L Sbjct: 211 GHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLLD 264 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 S G + LSGS D +RLWDL + + HT Sbjct: 265 STGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHT 297 >At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat family protein contains seven G-protein beta WD-40 repeats; similar to uncharacterized KIAA1449 protein (gi:7959157) [Homo sapiens] Length = 753 Score = 49.2 bits (112), Expect = 2e-06 Identities = 29/93 (31%), Positives = 44/93 (47%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH + +A N M++S +K L VW + G +L GH+ + ++L Sbjct: 211 GHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLLD 264 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 S G + LSGS D +RLWDL + + HT Sbjct: 265 STGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHT 297 >At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat family protein similar to TBP-associated factor (GI:1732075) [Homo sapiens] and to 100 kDa subunit of Pol II transcription factor (GI:1491718) {Homo sapiens]; contains Pfam PF00400: WD domain, G-beta repeat (6 copies)|8689032|gb|AV528749.1|AV528749 Length = 666 Score = 48.8 bits (111), Expect = 2e-06 Identities = 31/92 (33%), Positives = 46/92 (50%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GHN + +P + S S D+T +W + R + P + + GH +SDV Sbjct: 458 GHNYPVWDAQFSP-FGHYFASCSHDRTARIWSMDRIQ-----PLRIMAGH---LSDVDWH 508 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 + NY +GS DKT+RLWD+ G+ R F H Sbjct: 509 PNCNYIATGSSDKTVRLWDVQTGECVRIFIGH 540 Score = 41.9 bits (94), Expect = 3e-04 Identities = 27/82 (32%), Positives = 42/82 (51%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GH+G + +P D +LSSS D T+ +W T+ N + GH++ + D Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWS-TKLNANLVCYK----GHNYPVWDAQ 467 Query: 254 LSSDGNYALSGSWDKTLRLWDL 319 S G+Y S S D+T R+W + Sbjct: 468 FSPFGHYFASCSHDRTARIWSM 489 Score = 40.7 bits (91), Expect = 6e-04 Identities = 22/81 (27%), Positives = 39/81 (48%) Frame = +2 Query: 89 GWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDG 268 G ++ + +P + I + S DKT+ +W + E + GH + + +S DG Sbjct: 500 GHLSDVDWHPNC-NYIATGSSDKTVRLWDVQTGEC-----VRIFIGHRSMVLSLAMSPDG 553 Query: 269 NYALSGSWDKTLRLWDLAAGK 331 Y SG D T+ +WDL+ + Sbjct: 554 RYMASGDEDGTIMMWDLSTAR 574 Score = 38.7 bits (86), Expect = 0.003 Identities = 24/91 (26%), Positives = 42/91 (46%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH + +A +P M S D T+++W L+ L GH+ + + S Sbjct: 539 GHRSMVLSLAMSPDGRYMA-SGDEDGTIMMWDLSTARCI-----TPLMGHNSCVWSLSYS 592 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFED 352 +G+ SGS D T++LWD+ + + E+ Sbjct: 593 GEGSLLASGSADCTVKLWDVTSSTKLTKAEE 623 >At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A phosphatases pleiotropic regulator PRL2 {Arabidopsis thaliana}, GB:Q39190 from [Arabidopsis thaliana]; contains Pfam PF00400: WD domain, G-beta repeat (7 copies, 1 weak) Length = 479 Score = 48.8 bits (111), Expect = 2e-06 Identities = 26/94 (27%), Positives = 44/94 (46%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GH GW+ +A +P + + S D+T+ +W + G+ + L GH + + Sbjct: 166 LQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIGQVRGLA 219 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 +S+ Y S DK ++ WDL K R + H Sbjct: 220 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGH 253 Score = 40.7 bits (91), Expect = 6e-04 Identities = 25/94 (26%), Positives = 41/94 (43%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH + +A +P D++L+ RD VW + + LP H + V+ Sbjct: 252 GHLHGVYCLALHPTL-DVVLTGGRDSVCRVWDIRTKMQIFVLP------HDSDVFSVLAR 304 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 ++GS D T++ WDL GK+ +H K Sbjct: 305 PTDPQVITGSHDSTIKFWDLRYGKSMATITNHKK 338 Score = 36.7 bits (81), Expect = 0.010 Identities = 23/86 (26%), Positives = 42/86 (48%) Frame = +2 Query: 62 LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFI 241 L+ TL GH G + +A + ++ M S+ DK + W L +++ + +GH H + Sbjct: 204 LKLTLTGHIGQVRGLAVSNRHTYMF-SAGDDKQVKCWDLEQNKVI-----RSYHGHLHGV 257 Query: 242 SDVVLSSDGNYALSGSWDKTLRLWDL 319 + L + L+G D R+WD+ Sbjct: 258 YCLALHPTLDVVLTGGRDSVCRVWDI 283 >At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat family protein similar to katanin p80 subunit [Strongylocentrotus purpuratus] GI:3005601; contains Pfam profile PF00400: WD domain, G-beta repeat Length = 871 Score = 48.4 bits (110), Expect = 3e-06 Identities = 27/102 (26%), Positives = 47/102 (46%) Frame = +2 Query: 50 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 229 E K+ TL GH + +P + + S S D L +W + + + GH Sbjct: 182 EEAKVVRTLTGHRSNCVSVNFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 235 Query: 230 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 + ++ + + DG + +SG D +++WDL AGK F+ H Sbjct: 236 TRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH 277 Score = 36.3 bits (80), Expect = 0.014 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 LYGHS I V + +G+ T++LWDL K R H Sbjct: 148 LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGH 193 Score = 32.3 bits (70), Expect = 0.22 Identities = 21/97 (21%), Positives = 40/97 (41%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 +L GH+ I + + ++ + + T+ +W L + + L GH V Sbjct: 147 SLYGHSSGIDSVTFDAS-EGLVAAGAASGTIKLWDLEEAKV-----VRTLTGHRSNCVSV 200 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 G + SGS D L++WD+ ++ HT+ Sbjct: 201 NFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 237 >At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); katanin p80 subunit (GI:3005601) [Strongylocentrotus purpuratus] Length = 836 Score = 48.0 bits (109), Expect = 4e-06 Identities = 27/102 (26%), Positives = 47/102 (46%) Frame = +2 Query: 50 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 229 E K+ TL GH + +P + + S S D L +W + + + GH Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142 Query: 230 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 + ++ + + DG + +SG D +++WDL AGK F+ H Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184 Score = 34.7 bits (76), Expect = 0.042 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 LYGHS I V + +G+ T++LWDL K R H Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGH 100 Score = 31.1 bits (67), Expect = 0.52 Identities = 21/97 (21%), Positives = 40/97 (41%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 +L GH+ I + + ++ + + T+ +W L + + L GH V Sbjct: 54 SLYGHSSGIDSVTFDASEV-LVAAGAASGTIKLWDLEEAKI-----VRTLTGHRSNCISV 107 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 G + SGS D L++WD+ ++ HT+ Sbjct: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 144 >At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); katanin p80 subunit (GI:3005601) [Strongylocentrotus purpuratus] Length = 837 Score = 48.0 bits (109), Expect = 4e-06 Identities = 27/102 (26%), Positives = 47/102 (46%) Frame = +2 Query: 50 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 229 E K+ TL GH + +P + + S S D L +W + + + GH Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142 Query: 230 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 + ++ + + DG + +SG D +++WDL AGK F+ H Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184 Score = 34.7 bits (76), Expect = 0.042 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 LYGHS I V + +G+ T++LWDL K R H Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGH 100 Score = 31.1 bits (67), Expect = 0.52 Identities = 21/97 (21%), Positives = 40/97 (41%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 +L GH+ I + + ++ + + T+ +W L + + L GH V Sbjct: 54 SLYGHSSGIDSVTFDASEV-LVAAGAASGTIKLWDLEEAKI-----VRTLTGHRSNCISV 107 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 G + SGS D L++WD+ ++ HT+ Sbjct: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 144 >At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat family protein contains Pfam profile: PF00400 WD domain, G-beta repeat (10 copies); similar to WD-repeat protein 3 (SP:Q9UNX4) [Homo sapiens] Length = 955 Score = 48.0 bits (109), Expect = 4e-06 Identities = 27/79 (34%), Positives = 41/79 (51%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 262 H G +T + N K M+ S S+D +I+W + + + RL GH ++D+V Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFLD 158 Query: 263 DGNYALSGSWDKTLRLWDL 319 G +S S DK LR+WDL Sbjct: 159 GGKKLVSSSKDKFLRVWDL 177 Score = 37.1 bits (82), Expect = 0.008 Identities = 16/37 (43%), Positives = 23/37 (62%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 328 LYGH + + +SSDG ++GS DK L++W L G Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFG 614 Score = 32.7 bits (71), Expect = 0.17 Identities = 22/89 (24%), Positives = 43/89 (48%) Frame = +2 Query: 50 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 229 ++LK +L GH + I + ++I++ S+DK L +W L ++G K ++ H Sbjct: 570 DSLKFYLSLYGHKLPVMCIDISSD-GELIVTGSQDKNLKIWGL-----DFGDCHKSIFAH 623 Query: 230 SHFISDVVLSSDGNYALSGSWDKTLRLWD 316 + V + +Y S D+ ++ WD Sbjct: 624 GDSVMGVKFVRNTHYLFSIGKDRLVKYWD 652 Score = 29.9 bits (64), Expect = 1.2 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 316 L GH I + +S+ G++ ++GS D+++R WD Sbjct: 662 LEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694 >At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat family protein SOF1 (involved in rRNA processing) protein-yeast Length = 442 Score = 47.6 bits (108), Expect = 6e-06 Identities = 26/84 (30%), Positives = 42/84 (50%) Frame = +2 Query: 68 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISD 247 G + GH ++ +A NP Y I S+S D + +W ++ T P GH + Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP-----GHQGAVRG 104 Query: 248 VVLSSDGNYALSGSWDKTLRLWDL 319 + S+DGN +S D T+RLW++ Sbjct: 105 LTASTDGNVLVSCGTDCTVRLWNV 128 Score = 28.3 bits (60), Expect = 3.6 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +2 Query: 248 VVLSSDGNYALSGSWDKTLRLWDLAAGK 331 V S D Y +SGS D LRLW A + Sbjct: 328 VKYSCDATYVISGSDDTNLRLWKAKASE 355 >At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to Will die slowly protein (SP:Q9V3J8)[Drosophila melanogaster] Length = 511 Score = 46.8 bits (106), Expect = 1e-05 Identities = 24/77 (31%), Positives = 42/77 (54%) Frame = +2 Query: 128 DMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 307 +M+ S S+D + +W++ G+ +R HS ++ + S DG+ LS S+D+T R Sbjct: 276 EMLASGSQDGKIKIWRIRT-----GVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330 Query: 308 LWDLAAGKTTRRFEDHT 358 + L +GK + F HT Sbjct: 331 IHGLKSGKLLKEFRGHT 347 Score = 34.7 bits (76), Expect = 0.042 Identities = 20/78 (25%), Positives = 42/78 (53%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 262 H+ +T ++ + + +LS+S D+T + L G K GH+ +++ + +S Sbjct: 304 HSQGVTSLSFS-RDGSQLLSTSFDQTARIHGLKS-----GKLLKEFRGHTSYVNHAIFTS 357 Query: 263 DGNYALSGSWDKTLRLWD 316 DG+ ++ S D T+++WD Sbjct: 358 DGSRIITASSDCTVKVWD 375 Score = 31.9 bits (69), Expect = 0.30 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%) Frame = +2 Query: 134 ILSSSRDKTLIVW-----KLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDK 298 + SSS D + VW KL +D Y + + H + + S D SGS D Sbjct: 228 LASSSVDGFIEVWDYISGKLKKD-LQYQADESFMM-HDDPVLCIDFSRDSEMLASGSQDG 285 Query: 299 TLRLWDLAAGKTTRRFEDHTK 361 +++W + G RRF+ H++ Sbjct: 286 KIKIWRIRTGVCIRRFDAHSQ 306 >At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat family protein contains 8 WD-40 repeats (PF00400); similar to transducin homolog sazD - Homo sapiens, EMBL:U02609 Length = 876 Score = 46.4 bits (105), Expect = 1e-05 Identities = 28/101 (27%), Positives = 48/101 (47%) Frame = +2 Query: 56 LKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSH 235 LK R + H+ I +A + ++ + S D+T +W+L D + L GH Sbjct: 489 LKTRSVVAAHDKDINSVAV-ARNDSLVCTGSEDRTASIWRLP-DLVHV----VTLKGHKR 542 Query: 236 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 I V S+ ++ S DKT+++W ++ G + FE HT Sbjct: 543 RIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHT 583 Score = 43.2 bits (97), Expect = 1e-04 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 2/100 (2%) Frame = +2 Query: 50 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 229 ETLK + GH G + +A + ++ ++ D+ ++VW + + G GH Sbjct: 90 ETLKCIRSWKGHEGPVMGMACHAS-GGLLATAGADRKVLVW-----DVDGGFCTHYFRGH 143 Query: 230 SHFISDVVLSSDGN--YALSGSWDKTLRLWDLAAGKTTRR 343 +S ++ D N +SGS D T+R+WDL A T ++ Sbjct: 144 KGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKK 183 Score = 42.3 bits (95), Expect = 2e-04 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%) Frame = +2 Query: 80 GHNGWITQIATNP-KYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVL 256 GH G ++ I +P ++++S S D T+ VW L T + H ++ + L Sbjct: 142 GHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKC-LAIMEKHFSAVTSIAL 200 Query: 257 SSDGNYALSGSWDKTLRLWDL 319 S DG S DK + LWDL Sbjct: 201 SEDGLTLFSAGRDKVVNLWDL 221 Score = 39.1 bits (87), Expect = 0.002 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 5/89 (5%) Frame = +2 Query: 68 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL---TRD-ETNYGLPQKRLY-GHS 232 G GHNG I +A K +S S D+TL VW L + D E L + + H Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHD 499 Query: 233 HFISDVVLSSDGNYALSGSWDKTLRLWDL 319 I+ V ++ + + +GS D+T +W L Sbjct: 500 KDINSVAVARNDSLVCTGSEDRTASIWRL 528 Score = 33.1 bits (72), Expect = 0.13 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 3/92 (3%) Frame = +2 Query: 53 TLKLRGTLCGHNGWITQIAT--NPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYG 226 T+ L GH + + T + +I++ S+DKT+ +W T ++ G+ G Sbjct: 390 TMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT-SKSCIGVGT----G 444 Query: 227 HSHFISDVVLSSDG-NYALSGSWDKTLRLWDL 319 H+ I V + ++ +SGS D+TL++W L Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476 Score = 33.1 bits (72), Expect = 0.13 Identities = 22/95 (23%), Positives = 42/95 (44%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 TL GH I + + ++++S DKT+ +W ++ G K GH+ + Sbjct: 536 TLKGHKRRIFSVEFST-VDQCVMTASGDKTVKIWAISD-----GSCLKTFEGHTSSVLRA 589 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 +DG +S D L+LW++ + ++ H Sbjct: 590 SFITDGTQFVSCGADGLLKLWNVNTSECIATYDQH 624 Score = 31.9 bits (69), Expect = 0.30 Identities = 23/107 (21%), Positives = 46/107 (42%) Frame = +2 Query: 62 LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFI 241 ++ T+ G + +T +A +P ++ S+ + + VW L ET + + GH + Sbjct: 52 VKSTIEGESDTLTALALSPD-DKLLFSAGHSRQIRVWDL---ETLKCIRSWK--GHEGPV 105 Query: 242 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV*QNFYF 382 + + G + D+ + +WD+ G T F H V + F Sbjct: 106 MGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILF 152 >At5g13480.1 68418.m01554 WD-40 repeat family protein similar to WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens}; contains 3 weak Pfam PF00400: WD domain, G-beta repeats; Length = 711 Score = 46.0 bits (104), Expect = 2e-05 Identities = 25/94 (26%), Positives = 47/94 (50%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH GW + +++S +D+ + +W +T G L+GH + + V + Sbjct: 266 GH-GWDVKSVDWHPTKSLLVSGGKDQLVKLW-----DTRSGRELCSLHGHKNIVLSVKWN 319 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 +GN+ L+ S D+ ++L+D+ K + F HTK Sbjct: 320 QNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTK 353 Score = 35.5 bits (78), Expect = 0.024 Identities = 21/87 (24%), Positives = 38/87 (43%) Frame = +2 Query: 53 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHS 232 T+K + GH +T +A +P + + +S S D ++ W + + +P H Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPN----AHD 396 Query: 233 HFISDVVLSSDGNYALSGSWDKTLRLW 313 + + D+ G SGS D T + W Sbjct: 397 NSVWDLAWHPIGYLLCSGSNDHTTKFW 423 >At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens] Length = 647 Score = 46.0 bits (104), Expect = 2e-05 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 1/96 (1%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH G I ++ + K +LSSS D+T+ +W++ DE R + H++F++ V + Sbjct: 320 GHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDEC------LRTFTHNNFVTCVAFN 371 Query: 260 S-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 364 D NY +SGS D +R+WD+ T R D+T + Sbjct: 372 PVDDNYFISGSIDGKVRIWDV----TRCRVVDYTDI 403 Score = 31.9 bits (69), Expect = 0.30 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Frame = +2 Query: 137 LSSSRDKTLIVWKLTRDETNYGLPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 307 L S D T +V T + + +K L+ GH I D+ S G Y LS S D+T+R Sbjct: 292 LRKSSDSTCVVLP----PTIFSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346 Query: 308 LWDLAAGKTTRRF 346 LW + + R F Sbjct: 347 LWRVGCDECLRTF 359 >At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens] Length = 647 Score = 46.0 bits (104), Expect = 2e-05 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 1/96 (1%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH G I ++ + K +LSSS D+T+ +W++ DE R + H++F++ V + Sbjct: 320 GHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDEC------LRTFTHNNFVTCVAFN 371 Query: 260 S-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 364 D NY +SGS D +R+WD+ T R D+T + Sbjct: 372 PVDDNYFISGSIDGKVRIWDV----TRCRVVDYTDI 403 Score = 31.9 bits (69), Expect = 0.30 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Frame = +2 Query: 137 LSSSRDKTLIVWKLTRDETNYGLPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 307 L S D T +V T + + +K L+ GH I D+ S G Y LS S D+T+R Sbjct: 292 LRKSSDSTCVVLP----PTIFSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346 Query: 308 LWDLAAGKTTRRF 346 LW + + R F Sbjct: 347 LWRVGCDECLRTF 359 >At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha, putative contains Pfam PF00400: WD domain, G-beta repeat; similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621) [Homo sapiens] Length = 1216 Score = 45.6 bits (103), Expect = 2e-05 Identities = 26/85 (30%), Positives = 46/85 (54%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 TL GH +I + + +YP I+S+S D+T+ +W + T + L GH+H++ Sbjct: 88 TLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW-QSRTCVSV----LTGHNHYVMCA 141 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAA 325 + +S S D+T+R+WD+ A Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGA 166 Score = 40.3 bits (90), Expect = 8e-04 Identities = 23/79 (29%), Positives = 44/79 (55%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH+ + A +P P +I+S + D+ + +W++ +ET L GH + +S V+ Sbjct: 202 GHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRM--NETK-AWEVDTLRGHMNNVSSVMFH 257 Query: 260 SDGNYALSGSWDKTLRLWD 316 + + +S S DK++R+WD Sbjct: 258 AKQDIIVSNSEDKSIRVWD 276 Score = 29.9 bits (64), Expect = 1.2 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Frame = +2 Query: 41 KMSETLKLR-GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 184 +M+ET TL GH ++ + + K D+I+S+S DK++ VW T+ Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279 >At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens] Length = 709 Score = 45.2 bits (102), Expect = 3e-05 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH G I ++ + K +LSSS D+T+ +W++ + R++ H F++ V + Sbjct: 361 GHTGEILDLSWSEK--GFLLSSSVDETVRLWRVGSSDECI-----RVFSHKSFVTCVAFN 413 Query: 260 S-DGNYALSGSWDKTLRLWDLA 322 D NY +SGS D +R+WD++ Sbjct: 414 PVDDNYFISGSIDGKVRIWDVS 435 Score = 31.9 bits (69), Expect = 0.30 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +2 Query: 206 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 PQ GH+ I D+ S G + LS S D+T+RLW + + R H Sbjct: 355 PQHEFRGHTGEILDLSWSEKG-FLLSSSVDETVRLWRVGSSDECIRVFSH 403 >At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 protein (ZFWD2), putative 99.8% identical to zfwd2 protein (GI:12057166) [Arabidopsis thaliana]; contains 6 copies (2 weak) Pfam PF00400: WD domain, G-beta repeat; contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) domain Length = 437 Score = 44.8 bits (101), Expect = 4e-05 Identities = 24/86 (27%), Positives = 43/86 (50%) Frame = +2 Query: 128 DMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 307 D++ + ++D +++ W+ TN P L GH+ ++ V L N SGS DKT++ Sbjct: 241 DLLFAGTQDGSILAWRYNA-ATNCFEPSASLTGHT--LAVVTLYVGANRLYSGSMDKTIK 297 Query: 308 LWDLAAGKTTRRFEDHTKV*QNFYFW 385 +W L + + DH+ V + W Sbjct: 298 VWSLDNLQCIQTLTDHSSVVMSLICW 323 Score = 39.9 bits (89), Expect = 0.001 Identities = 17/41 (41%), Positives = 26/41 (63%) Frame = +2 Query: 215 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 337 +L GH +S + L S + +GS D+TLR+WD A+G+ T Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCT 186 Score = 27.1 bits (57), Expect = 8.4 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +2 Query: 50 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVW 172 E+ L L GH ++ IA P D + + S+D+TL VW Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178 >At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to will die slowly protein (WDS) (SP:Q9V3J8) [Drosophila melanogaster] Length = 589 Score = 44.8 bits (101), Expect = 4e-05 Identities = 25/86 (29%), Positives = 45/86 (52%) Frame = +2 Query: 92 WITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGN 271 W Q + N KY + SSS+D+T I+W+++ D + L + L GH + ++ S D Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISADG-HISL-KHTLVGHHKPVIAILWSPDDR 332 Query: 272 YALSGSWDKTLRLWDLAAGKTTRRFE 349 L+ ++ +R WD+ +G +E Sbjct: 333 QVLTCGAEEVIRRWDVDSGDCVHMYE 358 Score = 29.9 bits (64), Expect = 1.2 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = +2 Query: 35 FIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 184 +I T KL L GH G + ++ +P M+ S+S D T+ +W L R Sbjct: 514 YIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR 563 Score = 28.3 bits (60), Expect = 3.6 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Frame = +2 Query: 122 YPDM--ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWD 295 YPD I++ D+++ +W L E Q+ + +SD+ ++ DG + +S D Sbjct: 370 YPDGQGIIAGMTDRSICMWDLDGREKECWKGQR-----TQKVSDIAMTDDGKWLVSVCKD 424 Query: 296 KTLRLWDLAA 325 + L+D A Sbjct: 425 SVISLFDREA 434 >At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat family protein similar to YTM1 - Homo sapiens, EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta repeat (7 copies,1 weak); Length = 402 Score = 44.4 bits (100), Expect = 5e-05 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Frame = +2 Query: 80 GHNGWITQIA---TNPKYPDMILSSSRDKTLIVWKL----TRDETNYGLPQKRLYGHSHF 238 GH+G I+ +A +N + ++S+D+TL ++K + D T K L GH Sbjct: 148 GHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKAS 207 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWD 316 + V GN S SWD T+ LW+ Sbjct: 208 VQSVSAQKSGNMVCSSSWDCTINLWN 233 Score = 33.1 bits (72), Expect = 0.13 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 331 L GH+ +S VV + + S SWD ++R WD+ GK Sbjct: 268 LVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDVETGK 304 Score = 28.3 bits (60), Expect = 3.6 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVL-SSDGNYALSGSWDKTLR 307 +I + D L VW + T+ P + HS +IS S + LS S+D + Sbjct: 327 LIAAGGSDPILRVWDPRKPGTS--APVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384 Query: 308 LWDLAAGKTTR 340 LWDL T+ Sbjct: 385 LWDLRTAVMTK 395 >At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat family protein similar to YTM1 - Homo sapiens, EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta repeat (7 copies,1 weak); Length = 433 Score = 44.4 bits (100), Expect = 5e-05 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 7/86 (8%) Frame = +2 Query: 80 GHNGWITQIA---TNPKYPDMILSSSRDKTLIVWKL----TRDETNYGLPQKRLYGHSHF 238 GH+G I+ +A +N + ++S+D+TL ++K + D T K L GH Sbjct: 148 GHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKAS 207 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWD 316 + V GN S SWD T+ LW+ Sbjct: 208 VQSVSAQKSGNMVCSSSWDCTINLWN 233 Score = 33.1 bits (72), Expect = 0.13 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 331 L GH+ +S VV + + S SWD ++R WD+ GK Sbjct: 268 LVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDVETGK 304 Score = 27.1 bits (57), Expect = 8.4 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVL-SSDGNYALSGSWDKTLR 307 +I + D L VW + T+ P + HS +IS S + LS S+D + Sbjct: 327 LIAAGGSDPILRVWDPRKPGTS--APVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384 Query: 308 LWDL 319 LWDL Sbjct: 385 LWDL 388 >At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to cell cycle control protein cwf8 (SP:O14011) [Schizosaccharomyces pombe (Fission yeast)] Length = 523 Score = 43.6 bits (98), Expect = 9e-05 Identities = 28/90 (31%), Positives = 47/90 (52%) Frame = +2 Query: 59 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 238 ++ TL GH+ +T I D++L++S DKT+ +W + D NY + L HS Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSED-GNY-TSRHTLKDHSAE 311 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWDLAAG 328 + V + + Y +S S D T +DL++G Sbjct: 312 VRAVTVHATNKYFVSASLDSTWCFYDLSSG 341 Score = 31.1 bits (67), Expect = 0.52 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA-GKTTRR--FEDHT 358 L GHS ++ + D + L+ S DKT+R+W + G T R +DH+ Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHS 309 >At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat family protein Similar to (SP:Q13112) Chromatin assembly factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo sapiens] Length = 487 Score = 43.2 bits (97), Expect = 1e-04 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Frame = +2 Query: 41 KMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLP-QKR 217 K ++ + +L H + I +P +++ S + L +WKL ETN K Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 L H + D+ S D Y +SGS D + +WD+ G + + H Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAH 153 Score = 31.5 bits (68), Expect = 0.39 Identities = 21/89 (23%), Positives = 40/89 (44%) Frame = +2 Query: 47 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYG 226 +++ K+ +L H + + +P ++S S D + I+W + N G + L Sbjct: 99 NQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIW-----DVNKGSVHQILDA 152 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLW 313 H H++ V Y S S D+T R++ Sbjct: 153 HCHYVQGVAWDPLAKYVASLSSDRTCRIY 181 >At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat family protein Similar to (SP:Q13112) Chromatin assembly factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo sapiens] Length = 397 Score = 43.2 bits (97), Expect = 1e-04 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Frame = +2 Query: 41 KMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLP-QKR 217 K ++ + +L H + I +P +++ S + L +WKL ETN K Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 L H + D+ S D Y +SGS D + +WD+ G + + H Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAH 153 Score = 31.5 bits (68), Expect = 0.39 Identities = 21/89 (23%), Positives = 40/89 (44%) Frame = +2 Query: 47 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYG 226 +++ K+ +L H + + +P ++S S D + I+W + N G + L Sbjct: 99 NQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIW-----DVNKGSVHQILDA 152 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLW 313 H H++ V Y S S D+T R++ Sbjct: 153 HCHYVQGVAWDPLAKYVASLSSDRTCRIY 181 >At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to cell cycle control protein cwf8 (SP:O14011) [Schizosaccharomyces pombe (Fission yeast)] Length = 537 Score = 43.2 bits (97), Expect = 1e-04 Identities = 29/101 (28%), Positives = 49/101 (48%) Frame = +2 Query: 59 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 238 ++ TL GH+ +T + D++L++S DKT+ +W+ D NY L HS Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 + V + Y +S S D T +DL++G + D +K Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK 352 >At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to cell cycle control protein cwf8 (SP:O14011) [Schizosaccharomyces pombe (Fission yeast)] Length = 565 Score = 43.2 bits (97), Expect = 1e-04 Identities = 29/101 (28%), Positives = 49/101 (48%) Frame = +2 Query: 59 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 238 ++ TL GH+ +T + D++L++S DKT+ +W+ D NY L HS Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 + V + Y +S S D T +DL++G + D +K Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK 352 >At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related similar to U4/U6 small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo sapiens}; contains Pfam PF00400: WD domain, G-beta repeat (7 copies)|19877698|gb|AU238529.1|AU238529 Length = 554 Score = 42.7 bits (96), Expect = 2e-04 Identities = 28/97 (28%), Positives = 43/97 (44%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 T GH + ++A +P + ++S DKT +W + N G GHS + + Sbjct: 334 TFEGHLDRLARVAFHPS-GKYLGTTSYDKTWRLWDI-----NTGAELLLQEGHSRSVYGI 387 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 DG A S D R+WDL G++ F+ H K Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIK 424 Score = 31.9 bits (69), Expect = 0.30 Identities = 19/77 (24%), Positives = 40/77 (51%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 262 H ++Q+ P+ + ++S D + +W RD + L K L GH ++ + +++ Sbjct: 464 HANLVSQVKYEPQEGYFLATASYDMKVNIWS-GRD---FSLV-KSLAGHESKVASLDITA 518 Query: 263 DGNYALSGSWDKTLRLW 313 D + + S D+T++LW Sbjct: 519 DSSCIATVSHDRTIKLW 535 Score = 27.5 bits (58), Expect = 6.4 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +2 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKT 334 GH + V S +G + SG D R+WDL K+ Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKS 457 >At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similiar to rab11 binding protein (GI:4512103) [Bos taurus] Length = 903 Score = 42.7 bits (96), Expect = 2e-04 Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLR 307 ++LSSS DKT+ +W + ET L +L+ H+ +++ + S D NY LSGS D +R Sbjct: 519 LLLSSSMDKTVRLWDI---ETKTCL---KLFAHNDYVTCIQFSPVDENYFLSGSLDAKIR 572 Query: 308 LWDL 319 +W + Sbjct: 573 IWSI 576 Score = 29.9 bits (64), Expect = 1.2 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = +2 Query: 206 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 P L GH I D+ S LS S DKT+RLWD+ Sbjct: 498 PVCSLKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDI 534 >At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo sapiens] Length = 482 Score = 42.7 bits (96), Expect = 2e-04 Identities = 19/43 (44%), Positives = 27/43 (62%) Frame = +2 Query: 212 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 340 K+L GHS ++D SS+ Y S S DKT+R+W+L+ G R Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIR 252 Score = 34.3 bits (75), Expect = 0.055 Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 4/97 (4%) Frame = +2 Query: 74 LCGHNGWITQI--ATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISD 247 L GH+ +T ++N +Y I SSS DKT+ VW+L+R G+ + +YG S Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR-----GVCIRVIYGISPQYCI 263 Query: 248 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR--FED 352 + N+ +G+ +K L +++ + G+ ++ FED Sbjct: 264 RFHPVNNNFLSAGNANKELTVFNFSTGRIIKKLLFED 300 >At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha, putative contains Pfam PF00400: WD domain, G-beta repeat; similar to Coatomer alpha subunit (Alpha-coat protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621) [Homo sapiens] Length = 1218 Score = 42.3 bits (95), Expect = 2e-04 Identities = 26/87 (29%), Positives = 46/87 (52%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 TL GH +I + + + P I+S+S D+T+ +W + T + L GH+H++ Sbjct: 88 TLLGHLDYIRTVQFHHENP-WIVSASDDQTIRIWNW-QSRTCISV----LTGHNHYVMCA 141 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAAGK 331 + +S S D+T+R+WD+ A K Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALK 168 Score = 39.1 bits (87), Expect = 0.002 Identities = 22/79 (27%), Positives = 44/79 (55%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH+ + + +P P +I+S + D+ + +W++ +ET L GH + +S V+ Sbjct: 202 GHDRGVNWASFHPTLP-LIVSGADDRQVKLWRM--NETK-AWEVDTLRGHMNNVSSVMFH 257 Query: 260 SDGNYALSGSWDKTLRLWD 316 + + +S S DK++R+WD Sbjct: 258 AKQDIIVSNSEDKSIRVWD 276 Score = 33.5 bits (73), Expect = 0.097 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GHN ++ + +PK D+++S+S D+T+ VW + + P L S SD+ Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189 Query: 254 LSSDG--NYALSG 286 D Y L G Sbjct: 190 GGVDAIVKYVLEG 202 Score = 29.9 bits (64), Expect = 1.2 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Frame = +2 Query: 41 KMSETLKLR-GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 184 +M+ET TL GH ++ + + K D+I+S+S DK++ VW T+ Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279 >At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); G protein beta subunit-like protein, Schistosoma mansoni, gb:U30261 Length = 321 Score = 41.9 bits (94), Expect = 3e-04 Identities = 29/99 (29%), Positives = 46/99 (46%) Frame = +2 Query: 59 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 238 KL L GHN + + +P P ++ S S D + + +T G + GH+ + Sbjct: 191 KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-AEGKTLLG----SMSGHTSW 245 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 + V S DG +GS D+T+RLWDL + +H Sbjct: 246 VLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNH 284 Score = 29.9 bits (64), Expect = 1.2 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = +2 Query: 47 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 178 +E L G++ GH W+ + +P I + S D+T+ +W L Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272 Score = 27.5 bits (58), Expect = 6.4 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = +2 Query: 98 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 277 T + P ++L+ S D+T+ +W+ DE + + GHS ++ + G A Sbjct: 21 TWVPATEDRPALLLTGSLDETVKLWR--PDELDL---VRTNTGHSLGVAALAAHPSGIIA 75 Query: 278 LSGSWDKTLRLWDLAAGKT 334 S S D +R++D+ T Sbjct: 76 ASSSIDSFVRVFDVDTNAT 94 >At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat family protein contains seven G-protein beta WD-40 repeats; similar to phospholipase a-2-activating protein SP:P27612 from [Mus musculus] Length = 760 Score = 41.9 bits (94), Expect = 3e-04 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Frame = +2 Query: 59 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 238 KLR L GH+ + I + I +SSRD+T+ VW L + +K L GH+ F Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68 Query: 239 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDH 355 + + + Y +SGS D + +W+L G+ + + H Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112 >At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat family protein contains seven G-protein beta WD-40 repeats; similar to phospholipase a-2-activating protein SP:P27612 from [Mus musculus] Length = 760 Score = 41.9 bits (94), Expect = 3e-04 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Frame = +2 Query: 59 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 238 KLR L GH+ + I + I +SSRD+T+ VW L + +K L GH+ F Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68 Query: 239 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDH 355 + + + Y +SGS D + +W+L G+ + + H Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112 >At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat family protein Similar to (SP:Q13112) Chromatin assembly factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo sapiens] Length = 428 Score = 41.5 bits (93), Expect = 4e-04 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%) Frame = +2 Query: 128 DMILSSSRDKTLIVWKLTRDETNYGLP-QKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 304 +++ S + L +WKL ETN K L H + D+ S D Y +SGS D + Sbjct: 18 ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSC 77 Query: 305 RLWDLAAGKTTRRFEDH 355 +WD+ G + + H Sbjct: 78 IIWDVNKGSVHQILDAH 94 Score = 31.5 bits (68), Expect = 0.39 Identities = 21/89 (23%), Positives = 40/89 (44%) Frame = +2 Query: 47 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYG 226 +++ K+ +L H + + +P ++S S D + I+W + N G + L Sbjct: 40 NQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIW-----DVNKGSVHQILDA 93 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLW 313 H H++ V Y S S D+T R++ Sbjct: 94 HCHYVQGVAWDPLAKYVASLSSDRTCRIY 122 >At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 protein (ZFWD1) identical to zfwd1 protein (GI:12057164) [Arabidopsis thaliana] Length = 430 Score = 41.1 bits (92), Expect = 5e-04 Identities = 23/100 (23%), Positives = 49/100 (49%) Frame = +2 Query: 86 NGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSD 265 NG + Q+ + D++ + ++D +++VW+ + + P L GH+ ++ V L Sbjct: 220 NGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFD-PAASLLGHT--LAVVSLYVG 276 Query: 266 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV*QNFYFW 385 N SG+ D ++++W L + + +HT V + W Sbjct: 277 ANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICW 316 Score = 35.1 bits (77), Expect = 0.032 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = +2 Query: 215 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 337 +L GH ++ + L S + + S D+T+R+WD A+G+ T Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCT 179 >At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat family protein contains Pfam profile:PF00560 Leucine Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic protein kinase domain; Pfam profile:PF00400 WD domain, G-beta repeat (7 copies) Length = 407 Score = 41.1 bits (92), Expect = 5e-04 Identities = 22/86 (25%), Positives = 39/86 (45%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 T GH G + +A +P ++ + D +WK+ + LP GH +S + Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-----GHKDSVSCL 119 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAAG 328 S DG SG D ++++D ++G Sbjct: 120 AFSYDGQLLASGGLDGVVQIFDASSG 145 Score = 34.3 bits (75), Expect = 0.055 Identities = 25/93 (26%), Positives = 47/93 (50%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GHN +T P +I + S D +LIVW E+ + + + Y H+ ++ + ++ Sbjct: 195 GHNLNVTCGDFTPD-GKLICTGSDDASLIVWNPKTCESIH-IVKGHPY-HTEGLTCLDIN 251 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 S+ + A+SGS D ++ + ++ GK HT Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHT 284 >At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to TIPD PROTEIN (SP:O15736)[Dictyostelium discoideum] Length = 515 Score = 40.7 bits (91), Expect = 6e-04 Identities = 27/100 (27%), Positives = 46/100 (46%) Frame = +2 Query: 59 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 238 ++R TL GH + + + ++S++ D+T+ +W L + G + S+ Sbjct: 306 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHK-----GYCTNTVLFTSN- 359 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 + + LS DG SG D LRLWD+ GK H+ Sbjct: 360 CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHS 399 Score = 36.3 bits (80), Expect = 0.014 Identities = 18/75 (24%), Positives = 36/75 (48%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 313 + + +D+ + +W +TN G K LYG I D+ ++ D ++ + L +W Sbjct: 246 LFTGGQDRAVKMW-----DTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVW 300 Query: 314 DLAAGKTTRRFEDHT 358 D+++G+ HT Sbjct: 301 DVSSGRVRHTLTGHT 315 >At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat family protein Similar to En/Spm-like transposon protein (gi:2739374)[Arabidopsis thaliana]; similar to GTP-binding regulatory protein and WD-repeat protein; contains 7 WD-40 repeats Length = 388 Score = 40.3 bits (90), Expect = 8e-04 Identities = 28/96 (29%), Positives = 45/96 (46%) Frame = +2 Query: 38 IKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKR 217 +K L L HN I +A + ++ S D +++VW+ RD+ + Sbjct: 243 VKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWE--RDDGGDIVVVGM 300 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA 325 L GH+ + + + SD SGS DKT+RLW +A Sbjct: 301 LRGHTESVLCLAVVSD--ILCSGSADKTVRLWKCSA 334 Score = 33.9 bits (74), Expect = 0.073 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLW 313 H +S + LS DG S SWD+TL++W Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIW 192 >At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 protein (ZFWD4) contains 6 WD-40 repeats (PF00400); contains Zinc finger C-x8-C-x5-C-x3-H type domain (PF00642); identical to zfwd4 protein (GI:12057170) [Arabidopsis thaliana] Length = 419 Score = 39.9 bits (89), Expect = 0.001 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRD-ETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 307 M+ + + +++VWK T D E++ L GHS ++ + G SGS DKT++ Sbjct: 224 MLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG--GQMLYSGSVDKTIK 281 Query: 308 LWDLAAGKTTRRFEDHTKV*QNFYFW*K 391 +WDL + + HT + W K Sbjct: 282 MWDLNTLQCIMTLKQHTGTVTSLLCWDK 309 Score = 28.3 bits (60), Expect = 3.6 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 331 L GH+ + + L + S S D TLR+WD +G+ Sbjct: 127 LEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQ 164 >At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); rab11 binding protein, Bos taurus, EMBL:AF117897 Length = 905 Score = 39.9 bits (89), Expect = 0.001 Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLR 307 ++LSSS DKT+ +W + ET L +L+ H+ +++ V + D +Y +SGS D +R Sbjct: 532 LLLSSSMDKTVRLWDI---ETQSCL---KLFAHNDYVTCVQFNPLDEDYFISGSLDAKIR 585 Query: 308 LWDLA 322 +W+++ Sbjct: 586 IWNIS 590 Score = 31.9 bits (69), Expect = 0.30 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Frame = +2 Query: 188 ETNYGLPQKRLYGHSHFISDVV-LS-SDGNYALSGSWDKTLRLWDLAAGKTTRRF 346 ET + L K + + + DV+ LS S LS S DKT+RLWD+ + F Sbjct: 502 ETVFSLSDKPICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLF 556 Score = 30.3 bits (65), Expect = 0.90 Identities = 20/80 (25%), Positives = 35/80 (43%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L HN ++T + NP D +S S D + +W ++ + K + ++ V Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQVVEWNDLKEM------VTAVC 608 Query: 254 LSSDGNYALSGSWDKTLRLW 313 + DG A GS + RL+ Sbjct: 609 YTPDGQAAFVGSINGHCRLY 628 >At5g67320.1 68418.m08490 WD-40 repeat family protein strong similarity to unknown protein (ref|NP_005638.1) Length = 613 Score = 39.5 bits (88), Expect = 0.001 Identities = 21/78 (26%), Positives = 35/78 (44%) Frame = +2 Query: 113 NPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSW 292 NP + S+S D T+ +W + G GH + + S +G Y SGS Sbjct: 507 NPNKQLTLASASFDSTVKLW-----DAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSL 561 Query: 293 DKTLRLWDLAAGKTTRRF 346 DK++ +W + GK + + Sbjct: 562 DKSIHIWSIKEGKIVKTY 579 Score = 33.1 bits (72), Expect = 0.13 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 H I + + G+Y L+GS D+T +WD+ A + ++FE H+ Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHS 407 Score = 31.5 bits (68), Expect = 0.39 Identities = 27/99 (27%), Positives = 46/99 (46%) Frame = +2 Query: 59 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 238 +L TL H G I + N K D +L+ S D+T +VW + +E +++ HS Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEEW-----KQQFEFHSGP 409 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 DV ++ ++A S S D + L + + + F H Sbjct: 410 TLDVDWRNNVSFATS-STDSMIYLCKIGETRPAKTFTGH 447 Score = 29.5 bits (63), Expect = 1.6 Identities = 20/74 (27%), Positives = 32/74 (43%) Frame = +2 Query: 140 SSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 +SS D + + K+ ET P K GH ++ V G+ S S D T ++W++ Sbjct: 423 TSSTDSMIYLCKI--GETR---PAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNI 477 Query: 320 AAGKTTRRFEDHTK 361 +HTK Sbjct: 478 KQSTFVHDLREHTK 491 >At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3 subunit 2, putative / eIF-3 beta, putative / eIF3i, putative strong similarity to SP|Q38884 Eukaryotic translation initiation factor 3 subunit 2 (eIF-3 beta) (eIF3 p36) (eIF3i) (TGF-beta receptor interacting protein 1) (TRIP-1) {Arabidopsis thaliana}; contains Pfam PF00400: WD domain, G-beta repeat (5 copies)|19799885|gb|AU231175.1|AU231175 Length = 355 Score = 39.5 bits (88), Expect = 0.001 Identities = 28/90 (31%), Positives = 45/90 (50%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH +T + N + D++ S ++D T VW E L R GHS + +S Sbjct: 35 GHERPLTFLRYN-RNGDLLFSCAKDHTPTVWFADNGER---LGTYR--GHSGAVWCCDIS 88 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFE 349 D + ++GS D+T +LWD+ +GK F+ Sbjct: 89 RDSSRLITGSADQTAKLWDVKSGKELFTFK 118 Score = 37.5 bits (83), Expect = 0.006 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 I+S D + +W ET L Q GH I+ + ++D ++ L+GS DKT +L Sbjct: 190 IVSGGEDAAIRIWDA---ETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKL 246 Query: 311 WDL 319 WD+ Sbjct: 247 WDM 249 >At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to Will die slowly protein (SP:Q9V3J8) [Fruit fly] {Drosophila m.] Length = 299 Score = 39.1 bits (87), Expect = 0.002 Identities = 25/94 (26%), Positives = 42/94 (44%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GH G + N + L+ +D+T+ +W R G+ K H + DV Sbjct: 14 LKGHEGAVLAARFNGD-GNYALTCGKDRTIRLWNPHR-----GILIKTYKSHGREVRDVH 67 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 ++SD S D+ + WD++ G+ R+F H Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGH 101 Score = 33.5 bits (73), Expect = 0.097 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = +2 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 ++ + +S+DGN L+G D TLRL D G+ + ++ H Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGH 225 Score = 27.5 bits (58), Expect = 6.4 Identities = 9/35 (25%), Positives = 20/35 (57%) Frame = +2 Query: 212 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 316 ++ GH ++ V + + +S +D++LR+WD Sbjct: 96 RKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130 >At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens] Length = 654 Score = 39.1 bits (87), Expect = 0.002 Identities = 22/82 (26%), Positives = 47/82 (57%), Gaps = 1/82 (1%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH G + I+ + + +LS+S DKT+ +WK+ ++ ++ H+ +++ V + Sbjct: 326 GHTGEVLDISWSKD--NYLLSASMDKTVRLWKVGSNDC------LGVFAHNSYVTSVQFN 377 Query: 260 S-DGNYALSGSWDKTLRLWDLA 322 + NY +SGS D +R+W+++ Sbjct: 378 PVNENYFMSGSIDGKVRIWNIS 399 Score = 35.5 bits (78), Expect = 0.024 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%) Frame = +2 Query: 197 YGLPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA 325 + + +K LY GH+ + D+ S D NY LS S DKT+RLW + + Sbjct: 314 FRIMEKPLYEFRGHTGEVLDISWSKD-NYLLSASMDKTVRLWKVGS 358 >At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3 subunit 2 / TGF-beta receptor interacting protein 1 / eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to eukaryotic translation initiation factor 3 subunit 2 (SP:Q38884) {Arabidopsis thaliana}; contains Pfam PF00400: WD domain, G-beta repeat (5 copies) Length = 254 Score = 39.1 bits (87), Expect = 0.002 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 I+S DK + +W ET L Q GH I+ + ++D ++ L+GS DKT +L Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219 Query: 311 WDL 319 WD+ Sbjct: 220 WDM 222 Score = 36.7 bits (81), Expect = 0.010 Identities = 26/90 (28%), Positives = 45/90 (50%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH +T + N + D++ S ++D T +W E L R GH+ + +S Sbjct: 8 GHERPLTFLRYN-REGDLLFSCAKDHTPTLWFADNGER---LGTYR--GHNGAVWCCDVS 61 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFE 349 D + ++GS D+T +LWD+ +GK F+ Sbjct: 62 RDSSRLITGSADQTAKLWDVKSGKELFTFK 91 >At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3 subunit 2 / TGF-beta receptor interacting protein 1 / eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to eukaryotic translation initiation factor 3 subunit 2 (SP:Q38884) {Arabidopsis thaliana}; contains Pfam PF00400: WD domain, G-beta repeat (5 copies) Length = 328 Score = 39.1 bits (87), Expect = 0.002 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 I+S DK + +W ET L Q GH I+ + ++D ++ L+GS DKT +L Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219 Query: 311 WDL 319 WD+ Sbjct: 220 WDM 222 Score = 36.7 bits (81), Expect = 0.010 Identities = 26/90 (28%), Positives = 45/90 (50%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH +T + N + D++ S ++D T +W E L R GH+ + +S Sbjct: 8 GHERPLTFLRYN-REGDLLFSCAKDHTPTLWFADNGER---LGTYR--GHNGAVWCCDVS 61 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFE 349 D + ++GS D+T +LWD+ +GK F+ Sbjct: 62 RDSSRLITGSADQTAKLWDVKSGKELFTFK 91 >At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3 subunit 2 / TGF-beta receptor interacting protein 1 / eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to eukaryotic translation initiation factor 3 subunit 2 (SP:Q38884) {Arabidopsis thaliana}; contains Pfam PF00400: WD domain, G-beta repeat (5 copies) Length = 328 Score = 39.1 bits (87), Expect = 0.002 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 I+S DK + +W ET L Q GH I+ + ++D ++ L+GS DKT +L Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219 Query: 311 WDL 319 WD+ Sbjct: 220 WDM 222 Score = 36.7 bits (81), Expect = 0.010 Identities = 26/90 (28%), Positives = 45/90 (50%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH +T + N + D++ S ++D T +W E L R GH+ + +S Sbjct: 8 GHERPLTFLRYN-REGDLLFSCAKDHTPTLWFADNGER---LGTYR--GHNGAVWCCDVS 61 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFE 349 D + ++GS D+T +LWD+ +GK F+ Sbjct: 62 RDSSRLITGSADQTAKLWDVKSGKELFTFK 91 >At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens] Length = 825 Score = 38.7 bits (86), Expect = 0.003 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRL 310 +LSSS DKT+ +W L+ +++ HS +++ + + D NY +SGS D +R+ Sbjct: 482 LLSSSMDKTVRLWDLSSKTC------LKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535 Query: 311 WDL 319 W + Sbjct: 536 WSI 538 Score = 35.5 bits (78), Expect = 0.024 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Frame = +2 Query: 188 ETNYGLPQKRLYGHSHFISDVV-LS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 E +GL +K + + DV+ LS S + LS S DKT+RLWDL++ KT + H+ Sbjct: 451 EAVFGLSEKPVCSFVGHLDDVLDLSWSKSQHLLSSSMDKTVRLWDLSS-KTCLKVFSHS 508 >At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat family protein contains seven G-protein beta WD-40 repeats Length = 910 Score = 38.7 bits (86), Expect = 0.003 Identities = 15/36 (41%), Positives = 23/36 (63%) Frame = +2 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 331 GH+ I+D+ S DG + +S S D +LR+WD+ K Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAK 590 Score = 26.2 bits (55), Expect(2) = 0.86 Identities = 10/40 (25%), Positives = 18/40 (45%) Frame = +2 Query: 197 YGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 316 + + +KR Y H + V S +S + L++WD Sbjct: 463 FDMSEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWD 502 Score = 22.6 bits (46), Expect(2) = 0.86 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +2 Query: 293 DKTLRLWDLAAGKTTRRFEDHT 358 D +RL+D+ K R F HT Sbjct: 536 DFVIRLYDVVTLKMVREFRGHT 557 >At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to pre-mRNA splicing factor PRP17 (SP:O60508) [Homo sapiens] Length = 457 Score = 38.3 bits (85), Expect = 0.003 Identities = 24/94 (25%), Positives = 44/94 (46%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 +L GH +T I + + ++ S+ D + VW + ++ + H+ + DV Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKK---KVRAFLHHNAPVKDV 211 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED 352 S G LS +D T RL+D+ G T+ F++ Sbjct: 212 KWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKE 245 >At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 WD-40 repeats (PF0400); identical to WD-40 repeat protein MSI3 (SP:O22469) [Arabidopsis thaliana] Length = 424 Score = 37.9 bits (84), Expect = 0.005 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 12/95 (12%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR---DETNYGL-----PQKRLY-- 223 L H G + Q+ +P + ++ SS D+ L+VW + R ++ L P + L+ Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360 Query: 224 -GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLA 322 GH ISD + D + +S + D +L++W +A Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMA 395 Score = 31.9 bits (69), Expect = 0.30 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 5/90 (5%) Frame = +2 Query: 86 NGWITQIATNPKYPDMILSSSRDKTLIVWKLTR----DETNYGLPQKRLYGHSHFISDVV 253 +G + + P+ P ++ + + + ++ R +T+ P RL GH + Sbjct: 117 DGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLA 176 Query: 254 LSS-DGNYALSGSWDKTLRLWDLAAGKTTR 340 SS Y LSGS D+ + LWD++A T + Sbjct: 177 WSSFKEGYLLSGSQDQRICLWDVSATATDK 206 >At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to L. erythrorhizon LEC14B, GenBank accession number Q40153 Length = 493 Score = 37.9 bits (84), Expect = 0.005 Identities = 22/79 (27%), Positives = 35/79 (44%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 262 H + + + ++ILS S D VW R P L GH ++ + Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWD-RRCFIGRDKPAGVLVGHLEGVTFIDSRG 328 Query: 263 DGNYALSGSWDKTLRLWDL 319 DG Y +S D+T++LWD+ Sbjct: 329 DGRYFISNGKDQTIKLWDI 347 Score = 32.7 bits (71), Expect = 0.17 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = +2 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 G+S I V S+DG ++GS D ++ ++DL A + + R HT Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHT 271 >At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat family protein contains 3 WD-40 repeats (PF00400); mRNA-associated protein mrnp 41 (SP:P78406) [Homo sapiens]; similar to mitotic checkpoint protein GI:9294423 from [Arabidopsis thaliana] Length = 140 Score = 37.9 bits (84), Expect = 0.005 Identities = 19/78 (24%), Positives = 38/78 (48%) Frame = +2 Query: 95 ITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNY 274 I+ ++ +PK D+++++S D + W++TR + + K H + DG Sbjct: 29 ISSLSFSPK-ADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTT 87 Query: 275 ALSGSWDKTLRLWDLAAG 328 +G DK ++W L +G Sbjct: 88 VFTGGCDKQAKMWPLLSG 105 >At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) contains seven G-protein beta WD-40 repeats; beta transducin-like protein, Podospora anserina, gb:L28125; contains Pfam profiles PF04503: Single-stranded DNA binding protein, SSDP; PF00400:WD domain, G-beta repeat; identical to cDNA LEUNIG (LEUNIG) GI:11141604 Length = 931 Score = 37.5 bits (83), Expect = 0.006 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 M+ S+ DK ++W T+ P+ L H+ I+D+ S + S+DKT+R+ Sbjct: 665 MLASAGHDKKAVLWY-----TDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719 Query: 311 WDL-AAGKTTRRFEDHTKV 364 WD G + R F H+ + Sbjct: 720 WDADNKGYSLRTFMGHSSM 738 >At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens] Length = 883 Score = 37.5 bits (83), Expect = 0.006 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRL 310 +LSSS DKT+ +W L+ +++ HS +++ + + D Y +SGS D +R+ Sbjct: 527 LLSSSMDKTVRLWNLSSQTC------LKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRV 580 Query: 311 WDLAAGKTTRRFEDHTKV 364 W + + ++ H V Sbjct: 581 WSIPDRQVVDWYDLHEMV 598 Score = 31.9 bits (69), Expect = 0.30 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Frame = +2 Query: 155 KTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV--LSSDGNYALSGSWDKTLRLWDLAA 325 K+L + + ++ +GL +K + DV+ S + LS S DKT+RLW+L++ Sbjct: 485 KSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKSQHLLSSSMDKTVRLWNLSS 543 >At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400) (1 weak); similar to Hypothetical RAE1-like protein.(SP:Q38942) [Arabidopsis thaliana]; similar to mRNA-associated protein mrnp 41 ((mRNA export protein) (GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406) [Homo sapiens] Length = 349 Score = 37.5 bits (83), Expect = 0.006 Identities = 18/78 (23%), Positives = 37/78 (47%) Frame = +2 Query: 95 ITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNY 274 I+ ++ +P+ D+++++S D + W+++R + K H + DG Sbjct: 28 ISSLSFSPR-ADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86 Query: 275 ALSGSWDKTLRLWDLAAG 328 SG DK ++W L +G Sbjct: 87 VFSGGCDKQAKMWPLLSG 104 Score = 29.5 bits (63), Expect = 1.6 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 Query: 269 NYALSGSWDKTLRLWD 316 N +GSWDKTL+ WD Sbjct: 127 NLLATGSWDKTLKYWD 142 >At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to En/Spm-like transposon protein GI:2739374 from [Arabidopsis thaliana]; no characterized homologs Length = 471 Score = 37.5 bits (83), Expect = 0.006 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 H +S + L+ D SGSWDKTL++W L+ K E H Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAH 286 Score = 30.7 bits (66), Expect = 0.68 Identities = 19/61 (31%), Positives = 32/61 (52%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 ++ S S DKTL VW+L+ + + + H ++ VV D + +GS D TL++ Sbjct: 259 LLYSGSWDKTLKVWRLSDSKC-----LESIEAHDDAVNTVVSGFD-DLVFTGSADGTLKV 312 Query: 311 W 313 W Sbjct: 313 W 313 >At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 protein (ZFWD3) contains 5 WD-40 repeats (PF00400); contains Zinc finger C-x8-C-x5-C-x3-H type domain (PF00642); identical to zfwd3 protein (GP:12057168) {Arabidopsis thaliana} Length = 472 Score = 37.1 bits (82), Expect = 0.008 Identities = 25/101 (24%), Positives = 41/101 (40%) Frame = +2 Query: 89 GWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDG 268 G + Q+ M+ + + +++VWK T E++ L GH H G Sbjct: 264 GVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGH-HSGEVTCFVVGG 322 Query: 269 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV*QNFYFW*K 391 SGS DKT+++WDL + + H + W K Sbjct: 323 EVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWDK 363 Score = 29.1 bits (62), Expect = 2.1 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 340 L GH + I + L + S S D TL +WD +G+ R Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVR 223 >At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat family protein contains 6 (4 significant) WD-40 repeats (PF0400); nuclear protein HIRA, mouse, PIR:S68141 Length = 1051 Score = 37.1 bits (82), Expect = 0.008 Identities = 27/102 (26%), Positives = 42/102 (41%) Frame = +2 Query: 50 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 229 E K TL GH + + +P M+ S S D T+ +W + G+ L GH Sbjct: 106 ENWKAVMTLRGHTADVVDLNWSPD-DSMLASGSLDNTVHIWNMRT-----GMCTTVLRGH 159 Query: 230 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 + V G++ S S DKT+ +W + R + H Sbjct: 160 LSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201 >At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 WD-40 repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis thaliana] Length = 785 Score = 37.1 bits (82), Expect = 0.008 Identities = 16/62 (25%), Positives = 33/62 (53%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 ++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++ Sbjct: 522 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 576 Query: 311 WD 316 WD Sbjct: 577 WD 578 Score = 27.9 bits (59), Expect = 4.8 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWK 175 T+ GH I+ +A +P ++ S+S DK++ +WK Sbjct: 752 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 785 >At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 WD-40 repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis thaliana] Length = 787 Score = 37.1 bits (82), Expect = 0.008 Identities = 16/62 (25%), Positives = 33/62 (53%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 ++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++ Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578 Query: 311 WD 316 WD Sbjct: 579 WD 580 Score = 27.9 bits (59), Expect = 4.8 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWK 175 T+ GH I+ +A +P ++ S+S DK++ +WK Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787 >At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 WD-40 repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis thaliana] Length = 787 Score = 37.1 bits (82), Expect = 0.008 Identities = 16/62 (25%), Positives = 33/62 (53%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 ++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++ Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578 Query: 311 WD 316 WD Sbjct: 579 WD 580 Score = 27.9 bits (59), Expect = 4.8 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWK 175 T+ GH I+ +A +P ++ S+S DK++ +WK Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787 >At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 WD-40 repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis thaliana] Length = 787 Score = 37.1 bits (82), Expect = 0.008 Identities = 16/62 (25%), Positives = 33/62 (53%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 ++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++ Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578 Query: 311 WD 316 WD Sbjct: 579 WD 580 Score = 27.9 bits (59), Expect = 4.8 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWK 175 T+ GH I+ +A +P ++ S+S DK++ +WK Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787 >At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 WD-40 repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis thaliana] Length = 787 Score = 37.1 bits (82), Expect = 0.008 Identities = 16/62 (25%), Positives = 33/62 (53%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 ++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++ Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578 Query: 311 WD 316 WD Sbjct: 579 WD 580 Score = 27.9 bits (59), Expect = 4.8 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWK 175 T+ GH I+ +A +P ++ S+S DK++ +WK Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787 >At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat family protein similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40 repeats Length = 367 Score = 37.1 bits (82), Expect = 0.008 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +2 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 340 GHS ++ VV S + L+GS D T R+WD GK + Sbjct: 199 GHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVK 237 >At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat family protein similar to WD-repeat protein 9 (SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD domain, G-beta repeat (4 copies) Length = 1677 Score = 36.7 bits (81), Expect = 0.010 Identities = 23/75 (30%), Positives = 37/75 (49%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 313 +++ S D+ + VW + +T Y L R GH I+D+ +SS+ + S S D +R+W Sbjct: 260 VITGSDDRLVKVWSM---DTAYCLASCR--GHEGDITDLAVSSNNIFIASASNDCVIRVW 314 Query: 314 DLAAGKTTRRFEDHT 358 L G HT Sbjct: 315 RLPDGLPVSVLRGHT 329 Score = 33.9 bits (74), Expect = 0.073 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = +2 Query: 212 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 KRL GH + + +L G Y ++GS D+ +++W + Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSM 274 Score = 30.3 bits (65), Expect = 0.90 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = +2 Query: 74 LCGHNGWITQIATNPK--YPDMILSSSRDKTLIVW 172 L GH G +T IA +P+ P +LSSS D T +W Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359 >At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat family protein contains 5 (4 significant) WD-40 repeats; similar to periodic tryptophan protein 1 homolog (Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610) (PIR2:I39360) [Homo sapiens] Length = 461 Score = 36.7 bits (81), Expect = 0.010 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E + G FI+ Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIA-- 421 Query: 251 VLSSDGNYALS-GSWDKTLRLWD 316 S D + L+ G L+LWD Sbjct: 422 -FSPDNPFLLAMGGVMGELKLWD 443 Score = 30.3 bits (65), Expect = 0.90 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +2 Query: 269 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 N S S DK +++WD+A G E HTK Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTK 277 Score = 27.9 bits (59), Expect = 4.8 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = +2 Query: 206 PQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLA 322 P + GH + V + S N +GS D+T++LWDL+ Sbjct: 361 PSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLS 400 >At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens]; similar to rab11 binding protein GI:4512103 from [Bos taurus] Length = 593 Score = 36.7 bits (81), Expect = 0.010 Identities = 18/36 (50%), Positives = 23/36 (63%) Frame = +2 Query: 206 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 313 P + LYGH+ + D+ S D N LS S DKT+RLW Sbjct: 264 PFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLW 298 Score = 36.7 bits (81), Expect = 0.010 Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 2/85 (2%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GH G + +A + +++LS+S+DKT+ +W+ D+ + ++ H+++++ V Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQCLH------VFHHNNYVTCVE 319 Query: 254 LS--SDGNYALSGSWDKTLRLWDLA 322 + + N+A SGS D R+W L+ Sbjct: 320 FNPVNKNNFA-SGSIDGKARIWGLS 343 >At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to myosin heavy chain kinase B (gb:U90946) [Dictyostelium discoideum] Length = 469 Score = 34.7 bits (76), Expect(2) = 0.013 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Frame = +2 Query: 221 YGHSHFISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTRRFED 352 + H IS + LS D SGSWDKT ++W DL ++ ED Sbjct: 208 FRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHED 254 Score = 28.7 bits (61), Expect = 2.8 Identities = 23/81 (28%), Positives = 38/81 (46%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 TL + +T IA + ++ S D T+ W+ + N G+ L GH ++ + Sbjct: 295 TLLKQDCAVTAIAVDQS-ATLVYCGSSDGTVNFWERENNMKNGGV----LKGHK--LAVL 347 Query: 251 VLSSDGNYALSGSWDKTLRLW 313 L + GN SGS D +R+W Sbjct: 348 CLVAAGNLMFSGSADLGIRVW 368 Score = 20.6 bits (41), Expect(2) = 0.013 Identities = 8/23 (34%), Positives = 12/23 (52%) Frame = +2 Query: 128 DMILSSSRDKTLIVWKLTRDETN 196 D I + +D + VWK E+N Sbjct: 147 DKIFTGHQDGKIRVWKAASKESN 169 >At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat family protein contains seven WD-40 G-protein beta repeats; similar to RA-regulated nuclear matrix-associated protein (GI:14161320) {Homo sapiens} Length = 535 Score = 36.3 bits (80), Expect = 0.014 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +2 Query: 50 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 178 E K G L GH G + + ++P D+++S SRD +W L Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200 Score = 28.7 bits (61), Expect = 2.8 Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRL 310 +L++S D+T+ VW + ++ G+ L GH+ + + ++ + +SGS D L Sbjct: 143 LLTASGDQTIKVWDVEENKCT-GV----LIGHTGTVKSMCSHPTNSDLLVSGSRDGCFAL 197 Query: 311 WDLAAGKTTRRFE 349 WDL ++ + E Sbjct: 198 WDLRCKSSSHKEE 210 Score = 27.9 bits (59), Expect = 4.8 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 H + I D+ + L+ S D+T+++WD+ K T HT Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHT 170 Score = 27.1 bits (57), Expect = 8.4 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +2 Query: 236 FISDVVLSSDGNYALSGSWDKTLRLWDL 319 F ++S DG Y LSGS D +W + Sbjct: 340 FFVRTMISPDGEYVLSGSSDGNAYIWQV 367 >At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis repressor; identical to COP1 regulatory protein/FUSCA protein FUS1 GI:402685 SP:P43254 Length = 675 Score = 36.3 bits (80), Expect = 0.014 Identities = 22/58 (37%), Positives = 25/58 (43%) Frame = +2 Query: 185 DETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 D N P GH +S V S+ A S S D TLRLWD+ R F HT Sbjct: 534 DLRNISQPLHVFSGHKKAVSYVKFLSNNELA-SASTDSTLRLWDVKDNLPVRTFRGHT 590 >At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat family protein similar to Transcriptional repressor rco-1 (SP:P78706) [Neurospora crassa]; similar to TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400) Length = 648 Score = 36.3 bits (80), Expect = 0.014 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 3/47 (6%) Frame = +2 Query: 185 DETNYGLP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 316 +E Y +P + +L GH+ +S + + S G LSGS+D T+R++D Sbjct: 159 EENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYD 205 Score = 33.9 bits (74), Expect = 0.073 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 H+ I+ V SSDG LS S+D +L++WDL Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDL 402 >At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to WD40-repeat containing protein Ciao 1 (SP:O76071) [Homo sapiens] Length = 352 Score = 35.9 bits (79), Expect = 0.018 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQ---KRLYGHSHFIS 244 L GH + + +P D++ S S D T+ VW D+ Y Q + GHS + Sbjct: 159 LTGHTQDVKMVQWHPTM-DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVW 217 Query: 245 DVVLSSDGNYALSGSWDKTLRLW 313 + ++ G+ ++ S D TL++W Sbjct: 218 SISFNAAGDKMVTCSDDLTLKIW 240 Score = 27.9 bits (59), Expect = 4.8 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 3/85 (3%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQK---RLYGHSHFISDVV 253 H + A +P ++ ++S D T +WK NYG + L GH + + V Sbjct: 73 HTRTVRSCAWSPS-GQLLATASFDGTTGIWK------NYGSEFECISTLEGHENEVKSVS 125 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAG 328 ++ G+ + S DK++ +W++ G Sbjct: 126 WNASGSCLATCSRDKSVWIWEVLEG 150 >At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to beta transducin-like protein HET-E2C*4 (GI:17225206) [Podospora anserina] Length = 315 Score = 35.5 bits (78), Expect = 0.024 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 1/91 (1%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH + +A N + S S D+T +W + + L GH+ + + Sbjct: 18 GHKKKVHSVAWNSN-GTKLASGSVDQTARIWNI-EPHGHSKAKDLELKGHTDSVDQLCWD 75 Query: 260 -SDGNYALSGSWDKTLRLWDLAAGKTTRRFE 349 + + S DK++RLWD +GK T++ E Sbjct: 76 PKHSDLVATASGDKSVRLWDARSGKCTQQVE 106 Score = 34.7 bits (76), Expect = 0.042 Identities = 22/90 (24%), Positives = 41/90 (45%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GH + Q+ +PK+ D++ ++S DK++ +W + Q L G + ++ Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCT---QQVELSGEN---INIT 115 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRR 343 DG + G+ D L + D+ K R Sbjct: 116 YKPDGTHVAVGNRDDELTILDVRKFKPLHR 145 Score = 31.1 bits (67), Expect = 0.52 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +2 Query: 203 LPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 L + GH + V +S+G SGS D+T R+W++ Sbjct: 11 LHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNI 49 >At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595) {Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352 Length = 444 Score = 35.5 bits (78), Expect = 0.024 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Frame = +2 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHT 358 GH+ + + S GN SG D + +WD LA+ K TR RFE+HT Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHT 300 >At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat family protein HIRA protein, Drosophila melanogaster, PID:e1250847 Length = 318 Score = 35.5 bits (78), Expect = 0.024 Identities = 19/80 (23%), Positives = 39/80 (48%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GH + ++ N ++ + RDK++ +W++ +E + L GHS + V+ Sbjct: 88 LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVL 146 Query: 254 LSSDGNYALSGSWDKTLRLW 313 + S S+D T+++W Sbjct: 147 WHPTMDVLFSCSYDNTIKIW 166 Score = 29.9 bits (64), Expect = 1.2 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWK---LTRDET 193 GH + +A NP +I S S DKT+ +W+ LTR T Sbjct: 18 GHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWT 58 >At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); GTP-binding protein beta chain homolog, Nicotiana tabacum, PIR:T16970 Length = 438 Score = 35.5 bits (78), Expect = 0.024 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 8/75 (10%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQ-KRLYGHS---HFIS--DVVLSSDGNYA--LSG 286 +++S S+D ++ VW L R ++ Q LY H+ H +S D+V+ G A +S Sbjct: 134 LLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISS 193 Query: 287 SWDKTLRLWDLAAGK 331 S D+T ++W L+ GK Sbjct: 194 SEDRTCKVWSLSRGK 208 Score = 33.1 bits (72), Expect = 0.13 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = +2 Query: 212 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 K+ +GH ++ +V S D + +SGS D ++R+W L Sbjct: 114 KKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149 Score = 29.1 bits (62), Expect = 2.1 Identities = 10/39 (25%), Positives = 21/39 (53%) Frame = +2 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 I + +++G Y + G + LW++A GK +++ H Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGH 119 >At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat family protein similar to PAK/PLC-interacting protein 1 (GI:4211689) {Homo sapiens} Length = 1115 Score = 35.5 bits (78), Expect = 0.024 Identities = 20/67 (29%), Positives = 31/67 (46%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 ++ S D ++ VW + + K H ++ LS G LSGS DKT+R+ Sbjct: 865 LLFSGFSDGSIRVWNVNKKIATLLWDIKE---HKSTVTCFSLSETGECVLSGSADKTIRV 921 Query: 311 WDLAAGK 331 W + GK Sbjct: 922 WQIVKGK 928 >At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 WD-40 repeats (PF0400); identical to WD-40 repeat protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40 repeats (PF0400); Length = 415 Score = 35.5 bits (78), Expect = 0.024 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 12/95 (12%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR---DETNYGL-----PQKRLY-- 223 + H G + Q+ +P + ++ SS D+ L+VW L R ++ L P + L+ Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH 359 Query: 224 -GHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLA 322 GH ISD + + + + S + D +L++W +A Sbjct: 360 GGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA 394 Score = 27.1 bits (57), Expect = 8.4 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +2 Query: 182 RDETNYGLPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAA 325 + +T+ P RL GH + S Y LSGS D+ + LWD++A Sbjct: 152 KSQTSECDPDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSA 200 >At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat family protein similar to Vegetatible incompatibility protein HET-E-1 (SP:Q00808) {Podospora anserina}; contains 7 WD-40 repeats (PF00400) Length = 418 Score = 35.5 bits (78), Expect = 0.024 Identities = 20/87 (22%), Positives = 42/87 (48%) Frame = +2 Query: 56 LKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSH 235 L+ + ++ H+ + IA + + + S D+ + VW E + L L H Sbjct: 225 LRCKESIKAHDDAVNAIAVSTN--GTVYTGSADRRIRVWAKPTGEKRHTLVAT-LEKHKS 281 Query: 236 FISDVVLSSDGNYALSGSWDKTLRLWD 316 ++ + L+ DG+ SGS D+++ +W+ Sbjct: 282 AVNALALNDDGSVLFSGSCDRSILVWE 308 Score = 33.1 bits (72), Expect = 0.13 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 5/111 (4%) Frame = +2 Query: 29 WGFIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLP 208 W S + +RG L GH+ I + D++LS S D+T+ +W+ D + L Sbjct: 307 WEREDTSNYMAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGPDSSYSCL- 362 Query: 209 QKRLYGHSHFISDVVL-----SSDGNYALSGSWDKTLRLWDLAAGKTTRRF 346 + L GH+ + + D +SGS D ++ W ++ K F Sbjct: 363 -EVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVKCWKVSVTKPDNSF 412 Score = 28.7 bits (61), Expect = 2.8 Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 4/52 (7%) Frame = +2 Query: 209 QKRLY-GHSHFISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTRRFED 352 +KRL+ H+ ++ + +S DG + S SWDKTL++W DL ++ + +D Sbjct: 187 KKRLWIEHADAVTALAVS-DG-FIYSVSWDKTLKIWRASDLRCKESIKAHDD 236 >At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat family protein similar to Vegetatible incompatibility protein HET-E-1 (SP:Q00808) {Podospora anserina}; contains 5 WD-40 repeats (PF00400); similar to beta transducin-like protein HET-E2C*4 (GP:17225206)[Podospora anserina] Length = 530 Score = 35.1 bits (77), Expect = 0.032 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L GH ++ +P M+++ S D T+ VW R T+ + + H + DVV Sbjct: 174 LLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWD-ARVHTSNWIAE---INHGLPVEDVV 229 Query: 254 -LSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTK 361 L S G A +G ++++WDL GK E H K Sbjct: 230 YLPSGGLIATAGG--NSVKVWDLIGGGKMVCSMESHNK 265 >At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to En/Spm-like transposon protein GI:2739374 from [Arabidopsis thaliana]; no characterized homologs Length = 473 Score = 34.7 bits (76), Expect = 0.042 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 H +S + L+ + SGSWDKTL++W L+ K + H Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAH 290 Score = 32.3 bits (70), Expect = 0.22 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 ++ S S DKTL VW+L+ + + + H I+ V D + +GS D TL++ Sbjct: 263 LLYSGSWDKTLKVWRLSDSKC-----LESIQAHDDAINTVAAGFD-DLLFTGSADGTLKV 316 Query: 311 WDL-AAGKTTRRF 346 W GK T+ F Sbjct: 317 WKRELQGKGTKHF 329 >At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4 significant) WD-40 repeats (PF0400); identical to WD-40 repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana] Length = 507 Score = 34.7 bits (76), Expect = 0.042 Identities = 27/90 (30%), Positives = 38/90 (42%) Frame = +2 Query: 47 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYG 226 S T+ RG GH + +A +P S D LI+W R TN ++ + Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWD-ARTGTNPVTKVEKAHD 337 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWD 316 D D N L+GS D T+RL+D Sbjct: 338 ADLHCVD-WNPHDDNLILTGSADNTVRLFD 366 >At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat family protein contains similarity to cockayne syndrome complementation group A protein GB:U28413 GI:975301 from [Homo sapiens]; confirmed by cDNA gi:1598289 Length = 450 Score = 34.7 bits (76), Expect = 0.042 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +2 Query: 215 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 337 R H ++ + ++DG Y LS D +RLWD+ +G+ T Sbjct: 307 RATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNT 347 >At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat family protein Strong similarity to gb X95263 Periodic tryptophan protein 2 gene (PWP2) from Homo sapiens and contains 6 WD40, G-beta repeat domains Length = 860 Score = 34.7 bits (76), Expect = 0.042 Identities = 22/98 (22%), Positives = 41/98 (41%) Frame = +2 Query: 35 FIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQK 214 F+ +T +++ L GH + + +P ++ SSS D T+ +W + + Sbjct: 460 FVWSKKTGQIKDILSGHEAPVHGLMFSP-LTQLLASSSWDYTVRLWDVFASKGTV----- 513 Query: 215 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 328 + H+H + V DG S + D + WD G Sbjct: 514 ETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEG 551 Score = 33.5 bits (73), Expect = 0.097 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 337 L GH + ++ S S SWD T+RLWD+ A K T Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGT 512 Score = 32.3 bits (70), Expect = 0.22 Identities = 22/74 (29%), Positives = 36/74 (48%) Frame = +2 Query: 161 LIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 340 L+VW R ET Y L Q+ GH ++ V S D +G+ D +++W++ +G Sbjct: 331 LLVWDW-RTET-YILKQQ---GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFI 385 Query: 341 RFEDHTKV*QNFYF 382 F +HT +F Sbjct: 386 TFTEHTNAVTALHF 399 >At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat family protein Strong similarity to gb X95263 Periodic tryptophan protein 2 gene (PWP2) from Homo sapiens and contains 6 WD40, G-beta repeat domains Length = 900 Score = 34.7 bits (76), Expect = 0.042 Identities = 22/98 (22%), Positives = 41/98 (41%) Frame = +2 Query: 35 FIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQK 214 F+ +T +++ L GH + + +P ++ SSS D T+ +W + + Sbjct: 500 FVWSKKTGQIKDILSGHEAPVHGLMFSP-LTQLLASSSWDYTVRLWDVFASKGTV----- 553 Query: 215 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 328 + H+H + V DG S + D + WD G Sbjct: 554 ETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEG 591 Score = 33.5 bits (73), Expect = 0.097 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 337 L GH + ++ S S SWD T+RLWD+ A K T Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGT 552 Score = 32.3 bits (70), Expect = 0.22 Identities = 22/74 (29%), Positives = 36/74 (48%) Frame = +2 Query: 161 LIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 340 L+VW R ET Y L Q+ GH ++ V S D +G+ D +++W++ +G Sbjct: 371 LLVWDW-RTET-YILKQQ---GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFI 425 Query: 341 RFEDHTKV*QNFYF 382 F +HT +F Sbjct: 426 TFTEHTNAVTALHF 439 >At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family protein contains G-protein beta WD-40 repeats Length = 539 Score = 34.3 bits (75), Expect = 0.055 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = +2 Query: 215 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 340 RL+GH I+ + L D SGSWD ++R+WD ++ K + Sbjct: 252 RLWGHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVK 291 Score = 32.7 bits (71), Expect = 0.17 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Frame = +2 Query: 137 LSSSRD-KTLIVWKLTRDETNYGLPQ-KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 LS R K L V + R T G LYGH+ + V L + + +D +R+ Sbjct: 129 LSDERSWKDLFVEREFRSRTFLGRYSIDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRM 188 Query: 311 WDLAAG 328 WD+ G Sbjct: 189 WDMEEG 194 >At3g20740.1 68416.m02624 fertilization-independent endosperm protein (FIE) contains 6 WD-40 repeats (PF00400); identical to fertilization-independent endosperm protein (GI:4567095) [Arabidopsis thaliana] Length = 369 Score = 34.3 bits (75), Expect = 0.055 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Frame = +2 Query: 47 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYG-LPQKRLY 223 SET+ +L GH + +I T P P +++++S+D+++ +W + ET L Sbjct: 117 SETI--HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV---ETGICILIFAGAG 171 Query: 224 GHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDL 319 GH + + V Y S D T+++W + Sbjct: 172 GHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSM 204 >At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400);similar to beta transducin-like protein HET-D2Y (GI:17225210) [Podospora anserina]. Length = 415 Score = 34.3 bits (75), Expect = 0.055 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 8/92 (8%) Frame = +2 Query: 68 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISD 247 G L GH I +A D++LS S DK+L VW+ E L GH+ + Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKS 378 Query: 248 VVLS---SDGN-----YALSGSWDKTLRLWDL 319 + +S SD N SGS D +L++W+L Sbjct: 379 LAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410 Score = 33.1 bits (72), Expect = 0.13 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLW 313 H +S + LS DG+ S SWD++ ++W Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIW 219 Score = 29.5 bits (63), Expect = 1.6 Identities = 15/61 (24%), Positives = 31/61 (50%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 313 + + S DK + VW + + + L L H ++ + +S DG SG+ D+++ +W Sbjct: 249 VYTGSADKKIKVWN--KKDKKHSLVAT-LTKHLSAVNALAISEDGKVLYSGACDRSILVW 305 Query: 314 D 316 + Sbjct: 306 E 306 >At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); similar to WD-repeat domain 4 protein (GI:9955698) [Mus musculus] Length = 427 Score = 34.3 bits (75), Expect = 0.055 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = +2 Query: 224 GHSHFISDVVLSSDGN----YALSGSWDKTLRLWDLAAG 328 GHS FI+ S Y +SGS D T+RLWD+ +G Sbjct: 201 GHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWDITSG 239 >At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 WD-40 repeats (PF0400); identical to WD-40 repeat protein (SP:O22467) [Arabidopsis thaliana] Length = 424 Score = 33.9 bits (74), Expect = 0.073 Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 262 H G + +A + ++ + S D+ L++W L + P + + HS ++ + + Sbjct: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSAS--KPVQSVVAHSMEVNCLAFNP 283 Query: 263 DGNYAL-SGSWDKTLRLWDLAAGKTT-RRFEDH 355 + + +GS DKT++L+DL T F+ H Sbjct: 284 FNEWVVATGSTDKTVKLFDLRKLSTALHTFDSH 316 Score = 31.9 bits (69), Expect = 0.30 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 10/94 (10%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL------PQKRLY--- 223 T H + Q+ NPK ++ S + L+VW L+R + + P + L+ Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHG 371 Query: 224 GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLA 322 GH+ ISD + ++ +S + D L++W +A Sbjct: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405 >At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to will die slowly protein (WDS) (SP:Q9V3J8) [Drosophila melanogaster] Length = 523 Score = 33.9 bits (74), Expect = 0.073 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVW 172 L GH+ + ++ NPK P M+ S+S D+T+ +W Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513 >At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome A-related contains 7 WD-40 repeats (PF00400); similar to phytochrome A supressor spa1 (GI:4809171) [Arabidopsis thaliana]; contains non-consensus (GC) donor splice sites at introns 4 and 6 Length = 1017 Score = 33.9 bits (74), Expect = 0.073 Identities = 21/70 (30%), Positives = 29/70 (41%) Frame = +2 Query: 269 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV*QNFYFW*K*CRKCV*RLYEAEDKCFVP 448 NY S +D ++LWD+ G+ F +H K + F C +L D C V Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDF----SEACPTKLASGSDDCSVK 822 Query: 449 LRGRRVRNIL 478 L RN L Sbjct: 823 LWNINERNCL 832 >At3g01340.1 68416.m00051 protein transport protein SEC13 family protein / WD-40 repeat family protein similar to Protein transport protein SEC13 SP|Q04491 {Saccharomyces cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris] Length = 302 Score = 33.9 bits (74), Expect = 0.073 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +2 Query: 71 TLCGHNGWITQIA-TNPKYPDMILSSSRDKTLIVWK 175 TL GH G + Q+A +PK+ ++ S S D +I+WK Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK 86 Score = 27.1 bits (57), Expect = 8.4 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +2 Query: 206 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 PQK GHS I DVV+ G + S D T+++ Sbjct: 3 PQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKI 37 >At1g21650.1 68414.m02710 preprotein translocase secA family protein contains Pfam profiles: PF01043 SecA protein, amino terminal region, PF00400 WD domain, G-beta repeat, PF00097 zinc finger, C3HC4 type (RING finger) Length = 1579 Score = 33.9 bits (74), Expect = 0.073 Identities = 22/63 (34%), Positives = 33/63 (52%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 313 + + S D T+ W L +D G + GH +S +V+ + Y SGSWD T+RLW Sbjct: 600 VYTGSGDNTIKAWSL-QD----GSLLCTMSGHKSVVSTLVVVNGVLY--SGSWDGTVRLW 652 Query: 314 DLA 322 L+ Sbjct: 653 SLS 655 >At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); some similarity to a group of proteins with homology to mammalian apoptosis regulators identified in zebrafish (PUBMED:10917738)Apaf-1(gi:7677507) Length = 537 Score = 33.5 bits (73), Expect = 0.097 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKT 334 H H ++ V LS D + S S D T+ WD+++GK+ Sbjct: 144 HQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKS 179 >At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related contains Pfam PF00400: WD domain, G-beta repeat; similar to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal trafficking regulator - Bos taurus, EMBL: AF114785 Length = 3471 Score = 33.5 bits (73), Expect = 0.097 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = +2 Query: 47 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT-----RDETNYGLPQ 211 S L+L +LC H + + + Y MI SSS D T+I+W L+ R N+ +P Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369 Query: 212 KRLY 223 +Y Sbjct: 3370 TVVY 3373 >At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to WDR protein, form B (GI:14970593) [Mus musculus] Length = 1589 Score = 33.5 bits (73), Expect = 0.097 Identities = 22/75 (29%), Positives = 35/75 (46%) Frame = +2 Query: 134 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 313 +++ S D+ + +W + ET L R GH I+D+ +SS+ S S D +R+W Sbjct: 320 VITGSDDRLVKIWSM---ETALCLASCR--GHEGDITDLAVSSNNALVASASNDFVIRVW 374 Query: 314 DLAAGKTTRRFEDHT 358 L G HT Sbjct: 375 RLPDGMPISVLRGHT 389 Score = 31.5 bits (68), Expect = 0.39 Identities = 10/36 (27%), Positives = 21/36 (58%) Frame = +2 Query: 212 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 K+L GH + + + G Y ++GS D+ +++W + Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSM 334 >At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat family protein similar to SEC13-related protein (SP:P55735) [Homo sapiens] Length = 302 Score = 33.5 bits (73), Expect = 0.097 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +2 Query: 71 TLCGHNGWITQIA-TNPKYPDMILSSSRDKTLIVWK 175 TL GH G + ++A +PKY ++ S S D +I+WK Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWK 86 >At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 receptor (PEX7) identical to peroxisomal targeting signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis thaliana]; WD-40 repeat protein family member; contains 6 WD-40 repeats (PF00400); similar to peroxismal targeting signal 2 receptor (PTS2R) (Peroxin-7) (PEX7)(SP:O00628) [Homo sapiens] Length = 317 Score = 33.5 bits (73), Expect = 0.097 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS- 259 H + + NP D L+SS D T+ +W + R + + H++ + V + Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPAS-----VRTFKEHAYCVYQAVWNP 159 Query: 260 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 G+ S S D TLR+WD+ +T H Sbjct: 160 KHGDVFASASGDCTLRIWDVREPGSTMIIPAH 191 Score = 31.9 bits (69), Expect = 0.30 Identities = 21/79 (26%), Positives = 35/79 (44%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 262 H + Q NPK+ D+ S+S D TL +W + + +P +S Sbjct: 148 HAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDF----EILSCDWNKY 203 Query: 263 DGNYALSGSWDKTLRLWDL 319 D + S DKT+++WD+ Sbjct: 204 DDCILATSSVDKTVKVWDV 222 >At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat family protein contains 4 (3 significant) WD-40 repeats; similar to periodic tryptophan protein 1 homolog (Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610) (PIR2:I39360) [Homo sapiens] Length = 414 Score = 33.1 bits (72), Expect = 0.13 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +2 Query: 269 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 N SGS DK +++WD+A GK E H K Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEK 258 >At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo sapiens}; similar to WD repeat protein Srw1 -Schizosaccharomyces pombe,PID:d1023012 Length = 475 Score = 33.1 bits (72), Expect = 0.13 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 L GHS+ + + +S DG ++G+ D+TLR W++ Sbjct: 418 LTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451 Score = 32.3 bits (70), Expect = 0.22 Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 2/110 (1%) Frame = +2 Query: 32 GFIKMSETLKLRG--TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL 205 G +++ + L+ + T+ GH + +A + ++ S SRDK+++ + E + Sbjct: 231 GTVQIWDVLRCKNIRTMEGHRLRVGALAWSSS---VLSSGSRDKSILQRDIRTQEDHVS- 286 Query: 206 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 +L GH I + SSD SG D L +W+ + + RF +H Sbjct: 287 ---KLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEH 333 >At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); U3 snoRNP-associated 55-kDa protein, Homo sapiens, gb:NP_004695; Vegetatible incompatibility protein HET-E-1 (SP:Q00808) [Podospora anserina] Length = 504 Score = 33.1 bits (72), Expect = 0.13 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +2 Query: 203 LPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 L + R HS + +SSDG Y +G D+ + +WD+ + + F H Sbjct: 213 LREPRNKNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGH 263 Score = 32.7 bits (71), Expect = 0.17 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 340 H + V LS D + S S D T+ WD+++GKT + Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDK 197 >At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related contains Pfam PF02138: Beige/BEACH domain; contains Pfam PF00400: WD domain, G-beta repeat (3 copies) Length = 2946 Score = 33.1 bits (72), Expect = 0.13 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +2 Query: 221 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 340 +GH ++ + LS D N+ ++GS D T+ LW + T+R Sbjct: 2665 FGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSR 2704 Score = 28.7 bits (61), Expect(2) = 0.36 Identities = 14/50 (28%), Positives = 29/50 (58%) Frame = +2 Query: 47 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETN 196 S+ K T GH +T +A +P + +++ SRD T+++W++ + T+ Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRIHKAFTS 2703 Score = 21.4 bits (43), Expect(2) = 0.36 Identities = 13/46 (28%), Positives = 20/46 (43%) Frame = +2 Query: 206 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 343 P + L GH + +SSD +S S + L + G+ RR Sbjct: 2741 PIQVLRGHRRELVCCCVSSDQGVVVSSSESSDVLLHSIRKGRLIRR 2786 >At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); similar to block of proliferation protein Bop1 (GI:1679772) [Mus musculus] Length = 753 Score = 32.7 bits (71), Expect = 0.17 Identities = 11/36 (30%), Positives = 22/36 (61%) Frame = +2 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 331 GH+ ++ + S G + SGS D ++R+W++ G+ Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456 >At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat family protein similar to Will die slowly protein (SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam PF00400: WD domain, G-beta repeat (4 copies, 1 weak) Length = 330 Score = 32.3 bits (70), Expect = 0.22 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +2 Query: 245 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKV 364 + + DG Y LSGS D TL W++ R+E++ V Sbjct: 249 EATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGV 288 Score = 30.3 bits (65), Expect = 0.90 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = +2 Query: 122 YPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLY-GHSHFISDVVLSSDGNYALSGSWDK 298 +P ++ SSR + R + Y R + GH + + +S + +SGS D+ Sbjct: 77 HPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDR 136 Query: 299 TLRLWDL 319 ++RLWDL Sbjct: 137 SVRLWDL 143 >At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to retinoblastoma A associated protein; RbAp48 (GI:3309245) [Xenopus laevis] Length = 350 Score = 32.3 bits (70), Expect = 0.22 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVW 172 L GH W + NP+Y ++ILS D + +W Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280 >At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to Rbap46 polypeptide (GI:9454362) [Gallus gallus] Length = 351 Score = 32.3 bits (70), Expect = 0.22 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVW 172 L GH W + NP+Y +ILS+ D + +W Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280 >At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat family protein similar to Cockayne syndrome complementaion group A proteins (GI:18077663)[Mus musculus] and (SP:Q13216)[Homo sapiens]; confirmed by full-length cDNA GI:15982896 Length = 450 Score = 32.3 bits (70), Expect = 0.22 Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 2/88 (2%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQK--RLYGHSHFISDVV 253 G W+ + + + SS +K + K + + G+ R H ++ + Sbjct: 261 GDQNWLKTLQSKHTGSQSVKGSSSEKPSVE-KSRQKRIHPGMLSTLDRATAHYGVVTGLK 319 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTT 337 ++DG Y LS +RLWD+ +G+ T Sbjct: 320 ATNDGMYLLSAGSYSRIRLWDIESGRNT 347 >At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); damage-specific DNA binding protein 2 (GI:10798819) [Homo sapiens] Length = 557 Score = 31.9 bits (69), Expect = 0.30 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Frame = +2 Query: 113 NPKYPDMILSSSRDKTLIVW---KLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALS 283 NP P+++LS D +W KL + + L KR+ ++F S G L+ Sbjct: 321 NPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYF-----SPSSGTKILT 375 Query: 284 GSWDKTLRLWDLAAG 328 D +R+WD G Sbjct: 376 TCQDNRIRIWDSIFG 390 >At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens] Length = 698 Score = 31.9 bits (69), Expect = 0.30 Identities = 19/79 (24%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH+G I I+ + + +LS+S D ++ +W++ ++ ++ H+++++ V + Sbjct: 354 GHSGDILDISWSKN--NRLLSASVDNSVRLWQIGCEDC------LGIFSHNNYVTSVQFN 405 Query: 260 S-DGNYALSGSWDKTLRLW 313 D ++ +SGS D +R+W Sbjct: 406 PVDDDHFISGSIDGKVRIW 424 Score = 27.5 bits (58), Expect = 6.4 Identities = 10/34 (29%), Positives = 18/34 (52%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 184 HN ++T + NP D +S S D + +W ++ Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428 >At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens] Length = 694 Score = 31.9 bits (69), Expect = 0.30 Identities = 19/79 (24%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH+G I I+ + + +LS+S D ++ +W++ ++ ++ H+++++ V + Sbjct: 354 GHSGDILDISWSKN--NRLLSASVDNSVRLWQIGCEDC------LGIFSHNNYVTSVQFN 405 Query: 260 S-DGNYALSGSWDKTLRLW 313 D ++ +SGS D +R+W Sbjct: 406 PVDDDHFISGSIDGKVRIW 424 Score = 27.5 bits (58), Expect = 6.4 Identities = 10/34 (29%), Positives = 18/34 (52%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 184 HN ++T + NP D +S S D + +W ++ Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428 >At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat family protein contains similarity to photomorphogenesis repressor protein; contains Pfam PF00400: WD domain, G-beta repeat (5 copies) Length = 243 Score = 31.9 bits (69), Expect = 0.30 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +2 Query: 206 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 P L GH+ +S V G +G+ D L+LW + G+ R +E H Sbjct: 105 PALTLQGHTKTVSYVRFLDGGTVVTAGT-DGCLKLWSVEDGRVIRTYEGH 153 >At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam profile PF00400: WD domain, G-beta repeat Length = 580 Score = 31.9 bits (69), Expect = 0.30 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKV*QNFYFW*K 391 H +++ +V + + + +S S DKTLR+WDL T + F + H F W K Sbjct: 453 HDGYVTKLV-APESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGVSGFSIWGK 508 Score = 30.7 bits (66), Expect = 0.68 Identities = 13/37 (35%), Positives = 24/37 (64%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 193 H+G++T++ + +++SSS DKTL +W L + T Sbjct: 453 HDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRKSWT 487 >At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat family protein contains contains Pfam PF00400: WD domain, G-beta repeat (7 copies, 3 weak);similar to gene PC326 protein - mouse, PIR2:S37694 Length = 471 Score = 31.9 bits (69), Expect = 0.30 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +2 Query: 212 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 349 K+L H ++ V ++DG+ LSGS D+ + LWD F+ Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFD 94 >At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; contains Pfam PF00069: Protein kinase domain; contains PF02985: HEAT repeat; similar to adaptor protein (GI:1817584) [Homo sapiens]; similar to VPS15 protein (GI:6103009) [Pichia pastoris] Length = 1494 Score = 31.9 bits (69), Expect = 0.30 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = +2 Query: 200 GLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 316 G+ L H ++D+ SSD ++ +S S D T+++WD Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109 Score = 30.3 bits (65), Expect = 0.90 Identities = 19/63 (30%), Positives = 32/63 (50%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 M++ S+++ + +W D + L G ++S +V S GN+ +SGS L L Sbjct: 1203 MVMYSTQNCGIHLWDTRSDLDAWTLKANPEEG---YVSSLVTSPCGNWFVSGSSRGVLTL 1259 Query: 311 WDL 319 WDL Sbjct: 1260 WDL 1262 >At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to fizzy-related protein (GI:5813825) Drosophila melanogaster, PID:g2326419; Length = 518 Score = 31.9 bits (69), Expect = 0.30 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 L GH++ + + +S DG ++G+ D+TLR W++ Sbjct: 461 LTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494 Score = 29.5 bits (63), Expect = 1.6 Identities = 18/76 (23%), Positives = 35/76 (46%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 ++ S SRDK+++ + E + +L GH + + S D SG D L + Sbjct: 306 VLSSGSRDKSILQRDIRCQEDHVS----KLAGHKSEVCGLKWSYDNRELASGGNDNRLFV 361 Query: 311 WDLAAGKTTRRFEDHT 358 W+ + + ++ +HT Sbjct: 362 WNQHSTQPVLKYSEHT 377 >At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat family protein contains ten G-protein beta-subunit (beta-transducin) WD-40 repeats Length = 1308 Score = 31.5 bits (68), Expect = 0.39 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Frame = +2 Query: 134 ILSSSRDKTLIVWK---LTRDETNYG----LPQKRLYGHSHFISDVVLSSDGNYALSGSW 292 I S + +IVW+ L D ++G RL GH I +V S DG+ +S S Sbjct: 196 IASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSD 255 Query: 293 DKTLRLWDL 319 D++ R+W++ Sbjct: 256 DRSARIWEI 264 >At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat family protein contains ten G-protein beta-subunit (beta-transducin) WD-40 repeats Length = 1308 Score = 31.5 bits (68), Expect = 0.39 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Frame = +2 Query: 134 ILSSSRDKTLIVWK---LTRDETNYG----LPQKRLYGHSHFISDVVLSSDGNYALSGSW 292 I S + +IVW+ L D ++G RL GH I +V S DG+ +S S Sbjct: 196 IASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSD 255 Query: 293 DKTLRLWDL 319 D++ R+W++ Sbjct: 256 DRSARIWEI 264 >At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); related to En/Spm transposon family of maize Length = 465 Score = 31.5 bits (68), Expect = 0.39 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 H+ +S + L+ + S SWD+T+++W +A K H Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAH 247 Score = 29.5 bits (63), Expect = 1.6 Identities = 16/61 (26%), Positives = 32/61 (52%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 310 ++ S+S D+T+ VW++ + +P H ++ VV +++ SGS D T++ Sbjct: 220 LLYSASWDRTIKVWRIADSKCLESIP-----AHDDAVNSVVSTTEA-IVFSGSADGTVKA 273 Query: 311 W 313 W Sbjct: 274 W 274 Score = 27.1 bits (57), Expect = 8.4 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 9/73 (12%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGN---------YALS 283 ++ S S DKT+ VWK RD N L GH+ + + + +D S Sbjct: 350 LVFSGSADKTICVWK--RD-GNIHTCLSVLTGHTGPVKCLAVEADREASERRDKKWIVYS 406 Query: 284 GSWDKTLRLWDLA 322 GS DK++++W ++ Sbjct: 407 GSLDKSVKVWGVS 419 >At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic checkpoint protein, putative contains 5 WD-40 repeats (PF00400) (1 weak); similar to testis mitotic checkpoint protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens] Length = 339 Score = 31.5 bits (68), Expect = 0.39 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = +2 Query: 173 KLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 343 K+ R + N G + L H + V S ++GSWDKT++ WD T R Sbjct: 79 KVRRIDFNAG-KEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTER 134 Score = 29.1 bits (62), Expect = 2.1 Identities = 11/26 (42%), Positives = 20/26 (76%) Frame = +2 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWD 316 IS++ S++ ++ L SWDK++RL+D Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYD 44 >At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat family protein fizzy-related (FZR); contains 6 WD-40 repeats (PF00400); WD-repeat protein, carrot,(gi:2253631) PIR:T14352 Length = 428 Score = 31.1 bits (67), Expect = 0.52 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%) Frame = +2 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHT 358 GH+ + + S G SG D + +WD LA+ TR RFE+HT Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHT 284 Score = 29.1 bits (62), Expect = 2.1 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 343 L GH+ + + S DG S + D+TLRLW++ KTT++ Sbjct: 368 LNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 411 >At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat family protein contains 6 (3 significant) WD-40 repeats; similar to PC326 protein (GI:200241) (PIR2:S37694) [Mus musculus]; Human (H326) mRNA, Homo sapiens, gb:U06631 Length = 496 Score = 31.1 bits (67), Expect = 0.52 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +2 Query: 212 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 346 K+L H ++ V +++G+ +SGS D+ + LWD G F Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSF 97 >At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical protein contains similarity to ec31p [Oryza sativa] gi|13928450|dbj|BAB47154; contains Pfam profile PF00400: WD domain, G-beta repeat Length = 1102 Score = 31.1 bits (67), Expect = 0.52 Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 10/121 (8%) Frame = +2 Query: 29 WGFIKMSETLK---LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDE--T 193 W +K SE L+G+ G I+ I+ N K ++ S+S + T ++W L + + Sbjct: 150 WDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPII 209 Query: 194 NYGLPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHT 358 N+ +R L + + + ++++SD + + TL+LWD+ R F H Sbjct: 210 NFADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQ 263 Query: 359 K 361 + Sbjct: 264 R 264 >At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical protein contains similarity to ec31p [Oryza sativa] gi|13928450|dbj|BAB47154; contains Pfam profile PF00400: WD domain, G-beta repeat Length = 1104 Score = 31.1 bits (67), Expect = 0.52 Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 10/121 (8%) Frame = +2 Query: 29 WGFIKMSETLK---LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDE--T 193 W +K SE L+G+ G I+ I+ N K ++ S+S + T ++W L + + Sbjct: 150 WDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPII 209 Query: 194 NYGLPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHT 358 N+ +R L + + + ++++SD + + TL+LWD+ R F H Sbjct: 210 NFADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQ 263 Query: 359 K 361 + Sbjct: 264 R 264 >At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); myosin heavy chain kinase B (SP:P90648)(GI:1903458) [Dictyostelium discoideum] Length = 415 Score = 31.1 bits (67), Expect = 0.52 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = +2 Query: 212 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 KRL+ H S L+ SGSWDKTL++W L+ K + H Sbjct: 167 KRLW-IEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAH 213 Score = 28.3 bits (60), Expect = 3.6 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Frame = +2 Query: 128 DMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSD----GNYALSGSWD 295 +M+ S S DK++ +W+ R+ T ++GH + + S + G SG D Sbjct: 329 EMVCSGSADKSIGLWR--REVTGMLCKFGVIHGHEGPVKCLQASPNNVGAGFMLYSGGLD 386 Query: 296 KTLRLW 313 K+LR+W Sbjct: 387 KSLRVW 392 >At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A (PP2A) 55 kDa regulatory subunit B identical to type 2A protein serine/threonine phosphatase 55 kDa B regulatory subunit (GI:1408460) [Arabidopsis thaliana]; similar to 55 kDa B regulatory subunit of phosphatase 2A GI:710330; contains Pfam PF00400: WD domain, G-beta repeat (5 copies, 3 weak) Length = 500 Score = 31.1 bits (67), Expect = 0.52 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = +2 Query: 176 LTRDETNYGLPQKRLYGHSH--FISDVVLSSDGNYALSGSWDKTLRLWDL 319 +T ETN +R+Y H+H I+ + SSDG +S D + LW+L Sbjct: 201 VTSQETNLVARCRRVYAHAHDYHINSISNSSDGETFISAD-DLRVNLWNL 249 Score = 31.1 bits (67), Expect = 0.52 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +2 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWDL 319 ISD+ S DG Y LS + TL+LWD+ Sbjct: 332 ISDIKFSKDGRYILSRDY-MTLKLWDI 357 >At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A (PP2A) 55 kDa regulatory subunit B identical to type 2A protein serine/threonine phosphatase 55 kDa B regulatory subunit (GI:1408460) [Arabidopsis thaliana]; similar to 55 kDa B regulatory subunit of phosphatase 2A GI:710330; contains Pfam PF00400: WD domain, G-beta repeat (5 copies, 3 weak) Length = 501 Score = 31.1 bits (67), Expect = 0.52 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = +2 Query: 176 LTRDETNYGLPQKRLYGHSH--FISDVVLSSDGNYALSGSWDKTLRLWDL 319 +T ETN +R+Y H+H I+ + SSDG +S D + LW+L Sbjct: 202 VTSQETNLVARCRRVYAHAHDYHINSISNSSDGETFISAD-DLRVNLWNL 250 Score = 31.1 bits (67), Expect = 0.52 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +2 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWDL 319 ISD+ S DG Y LS + TL+LWD+ Sbjct: 333 ISDIKFSKDGRYILSRDY-MTLKLWDI 358 >At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 WD-40 repeats (PF00400); similar to Fzr1 (GI:6463679){Homo sapiens} Length = 481 Score = 30.7 bits (66), Expect = 0.68 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 L GHS + + S DG ++G+ D+TLR W++ Sbjct: 424 LTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457 Score = 27.5 bits (58), Expect = 6.4 Identities = 22/96 (22%), Positives = 44/96 (45%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 250 T+ GH +A N + ++ S SRD+ ++ + R ++++ +L GH + + Sbjct: 252 TMGGHQTRTGVLAWNSR---ILSSGSRDRNILQHDI-RVQSDF---VSKLVGHKSEVCGL 304 Query: 251 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 358 S D SG D L +W+ + + + +HT Sbjct: 305 KWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHT 340 >At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat family protein contains 3 WD-40 repeats (PF00400); WDVCF variant 1 (gi:12006981) [Mus musculus] Length = 386 Score = 30.7 bits (66), Expect = 0.68 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +2 Query: 206 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 316 P L GH H + DV + +GS D LR+WD Sbjct: 9 PVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWD 45 >At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats; similar to PC326 protein (GI:200241) (PIR2:S37694) [Mus musculus];Human (H326) translated mRNA - Homo sapiens, EMBL:HS06631 Length = 481 Score = 30.7 bits (66), Expect = 0.68 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = +2 Query: 215 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 328 +L GH ++ V +S G+ +SGS D+ + LW+ +G Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87 >At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat family protein contains 2 WD-40 repeats (PF00400); autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens] and autoantigen locus HSU17474 (GI:596134) [Homo sapiens] Length = 1309 Score = 30.7 bits (66), Expect = 0.68 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +2 Query: 62 LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQ 211 LR GH+ +T +A + DM+ S S D + VWK++ PQ Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243 >At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat family protein contains 2 WD-40 repeats (PF00400); autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens] and autoantigen locus HSU17474 (GI:596134) [Homo sapiens] Length = 1344 Score = 30.7 bits (66), Expect = 0.68 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +2 Query: 62 LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQ 211 LR GH+ +T +A + DM+ S S D + VWK++ PQ Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278 >At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related contains Pfam PF00400: WD domain, G-beta repeat; similar to Lipopolysaccharide-responsive and beige-like anchor protein (CDC4-like protein) (Beige-like protein) (SP:P50851) [Homo sapiens} Length = 1280 Score = 30.7 bits (66), Expect = 0.68 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 343 H +S V +++D +GS+D T+ +WD+ +T + Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEK 1083 >At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to En/Spm-like transposon protein (GI:2739374) [Arabidopsis thaliana] Length = 351 Score = 30.7 bits (66), Expect = 0.68 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 355 HS +S + L+ D S SWD+T+++W + K + H Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAH 176 >At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to Myosin heavy chain kinase B (MHCK B).(SP:P90648) [Dictyostelium discoideum] Length = 495 Score = 30.3 bits (65), Expect = 0.90 Identities = 19/85 (22%), Positives = 34/85 (40%) Frame = +2 Query: 101 QIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYAL 280 ++ T P + M+ SS K + + R+ H+ +S + L + Sbjct: 200 RVGTLPTFKSMVKSSVNPKHFMEVRRNRNSVKTK--------HNDAVSSLSLDVELGLLY 251 Query: 281 SGSWDKTLRLWDLAAGKTTRRFEDH 355 S SWD T+++W +A K H Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAH 276 >At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat family protein contains 5 (4 significant) WD-40 repeats; similar to periodic tryptophan protein 1 homolog (Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610) (PIR2:I39360) [Homo sapiens] Length = 494 Score = 30.3 bits (65), Expect = 0.90 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +2 Query: 269 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 N S S DK +++WD+A G E HTK Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTK 309 >At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome A-related contains 7 WD-40 repeats (PF00400); phytochrome A supressor spa1 (GI:4809171) [Arabidopsis thaliana] Length = 837 Score = 30.3 bits (65), Expect = 0.90 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDM--ILSSSRDKTLIVWKLTRDETNYG-LPQKRLYGHSHFI 241 T+ GH+ ++ + K+ D ++SSS D TL +W L+ + P GH++ Sbjct: 699 TMIGHSKTVSYV----KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLK 754 Query: 242 SDVVLSSDGNYALSGS 289 + V LS Y +GS Sbjct: 755 NFVGLSVSDGYIATGS 770 >At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat family protein Strong similarity to gb AF096285 serine-threonine kinase receptor-associated protein from Mus musculus and contains 5 PF|00400 WD40, G-beta repeat domains. EST gb|F14050 comes from this gene Length = 333 Score = 30.3 bits (65), Expect = 0.90 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = +2 Query: 80 GHNGWITQIATNPKYPD--MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 GH+ + +A +P PD ++S+S+D + L ET + GH + Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPM---LRNGETGDWIGT--FEGHKGAVWSCS 63 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 349 L + A S S D T ++W+ G FE Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFE 95 >At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related similar to BEIGE (GI:3928547) [Rattus norvegicus]; Similar to gb|U70015 lysosomal trafficking regulator from Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta repeats. ESTs gb|T43386 and gb|AA395236 come from this gene Length = 3601 Score = 30.3 bits (65), Expect = 0.90 Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 3/77 (3%) Frame = +2 Query: 131 MILSSSRDKTLIVWKLTRDETNYGLP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKT 301 ++++ + D + VW++++D +K L H+ ++ + +S SGS D T Sbjct: 3344 IVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCT 3403 Query: 302 LRLWDLAAGKTTRRFED 352 + +WDL++ R+ D Sbjct: 3404 VIIWDLSSLSFVRQLPD 3420 >At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat (4 copies, 1 weak); similar to Will die slowly protein. {Drosophila melanogaster} (SP:Q9V3J8) {Drosophila melanogaster} Length = 331 Score = 29.9 bits (64), Expect = 1.2 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD 316 GH + + L S G +SGS D+T+ LWD Sbjct: 118 GHHDRVVSLSLCSGGECFISGSLDRTVLLWD 148 >At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat (4 copies, 1 weak); similar to Will die slowly protein. {Drosophila melanogaster} (SP:Q9V3J8) {Drosophila melanogaster} Length = 328 Score = 29.9 bits (64), Expect = 1.2 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD 316 GH + + L S G +SGS D+T+ LWD Sbjct: 115 GHHDRVVSLSLCSGGECFISGSLDRTVLLWD 145 >At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 WD-40 repeats (PF0400); similar to WD-40 repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana] Length = 496 Score = 29.9 bits (64), Expect = 1.2 Identities = 22/84 (26%), Positives = 35/84 (41%) Frame = +2 Query: 65 RGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFIS 244 RG GH + +A P S D L++W R T+ + ++ + Sbjct: 274 RGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWD-ARTGTSPAMKVEKAHDADLHCV 332 Query: 245 DVVLSSDGNYALSGSWDKTLRLWD 316 D D N L+GS D T+R++D Sbjct: 333 D-WNPHDNNLILTGSADNTVRVFD 355 Score = 27.5 bits (58), Expect = 6.4 Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 8/87 (9%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNY---GLPQKR----LYGHSHFI 241 H G + +I P+ ++ + + +++W Y G P R L GH Sbjct: 152 HPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDA 211 Query: 242 S-DVVLSSDGNYALSGSWDKTLRLWDL 319 + + + LSG DK++ LW++ Sbjct: 212 EFALAMCPTEPFVLSGGKDKSVILWNI 238 >At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic checkpoint protein, putative contains 5 WD-40 repeats (PF00400) (1 weak); similar to testis mitotic checkpoint protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens] Length = 340 Score = 29.9 bits (64), Expect = 1.2 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = +2 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 346 IS++ S++ ++ L SWDK +RL+D++ F Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEF 55 Score = 29.9 bits (64), Expect = 1.2 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +2 Query: 170 WKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 316 +K+ R N G + L H + V S ++GSWDKT++ WD Sbjct: 79 YKVRRIVFNVG-KEDILGTHDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126 >At4g28620.1 68417.m04092 ABC transporter family protein identical to half-molecule ABC transporter ATM2 GI:9964119 from [Arabidopsis thaliana] Length = 680 Score = 29.5 bits (63), Expect = 1.6 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +3 Query: 141 LHHEI-KLLSCGN*LETKPTTACHRSVCTVTPI 236 LHH KL+ + LE+ PT A H+S +TP+ Sbjct: 28 LHHSFFKLIKRNSILESPPTNASHQSPSPITPM 60 >At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat family protein contains 4 WD-40 repeats (PF00400); similar to Retinoblastoma-binding protein 5 (RBBP-5) [Homo sapiens](RBQ-3) Length = 547 Score = 29.5 bits (63), Expect = 1.6 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Frame = +2 Query: 239 ISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTRRFED 352 + ++V S +G Y L+ S D+T+R+++ L A + ED Sbjct: 219 VKNIVFSRNGQYLLTNSHDRTIRIYENLLPAKNVLKSLED 258 Score = 27.5 bits (58), Expect = 6.4 Identities = 23/86 (26%), Positives = 39/86 (45%) Frame = +2 Query: 86 NGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSD 265 +G I +A N + ++ + D ++W ET + R S I+ V S Sbjct: 23 HGVIKCVAFNHR-GSLLAAGCADGGCVIWDF---ETRGIAKEIRDNDCSAAITSVSWSKY 78 Query: 266 GNYALSGSWDKTLRLWDLAAGKTTRR 343 G+ L + DK+L LWD++ G+ R Sbjct: 79 GHRLLVSAADKSLTLWDVSTGEKIAR 104 >At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat family protein Length = 334 Score = 29.1 bits (62), Expect = 2.1 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%) Frame = +2 Query: 224 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 316 GH+ +S V S G + +SG DKT+++WD Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279 >At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat family protein Length = 360 Score = 29.1 bits (62), Expect = 2.1 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%) Frame = +2 Query: 224 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 316 GH+ +S V S G + +SG DKT+++WD Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305 >At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595) {Xenopus laevis}; similar to "Will die slowly" protein, Drosophia; putative cdc20 protein - Arabidopsis thaliana, EMBL:AF029262 Length = 411 Score = 29.1 bits (62), Expect = 2.1 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 7/52 (13%) Frame = +2 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR----RFEDHT 358 GH+ + + S G SG D + +WD +A+ TR RFE+HT Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHT 267 Score = 29.1 bits (62), Expect = 2.1 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = +2 Query: 218 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 343 L GH+ + + S DG S + D+TLRLW++ KTT++ Sbjct: 351 LNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 394 >At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat family protein unnamed ORF cDNA FLJ10872, Homo sapiens, EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta repeat (6 copies,1 weak) Length = 757 Score = 29.1 bits (62), Expect = 2.1 Identities = 11/41 (26%), Positives = 25/41 (60%) Frame = +2 Query: 209 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 331 ++ L GH ++ + +S+G+ +SGS D + +W+ ++ K Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRK 83 >At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat family protein similar to 66 kDa stress protein (SP:P90587) [Physarum polycephalum (Slime mold)]; similar to WDR1 protein GB:AAD05042 [Gallus gallus] (Genomics 56 (1), 59-69 (1999)); contains 11 WD-40 repeats (PF00400) Length = 609 Score = 29.1 bits (62), Expect = 2.1 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +2 Query: 224 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA 322 GH I V S DG L+ S DK+ ++WD++ Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDIS 262 Score = 27.9 bits (59), Expect = 4.8 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +2 Query: 224 GHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLAAG 328 GH +S + VL + +Y LSGS+D + W L G Sbjct: 322 GHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRG 357 >At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam profile: PF00400 WD domain, G-beta repeat (3 copies, 1 significant); similar to Trp-Asp repeat protein (PIR:T40094) [Schizosaccharomyces] Length = 447 Score = 29.1 bits (62), Expect = 2.1 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +2 Query: 188 ETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 + N G + L GH F DG +G+ DKT R+WD+ Sbjct: 305 DPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDI 348 >At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); related to LACK protective antigen (GI:13625467) [Leishmania donovani] Length = 804 Score = 29.1 bits (62), Expect = 2.1 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +2 Query: 227 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 331 HS ++ + SSDG Y SG + L +W L GK Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316 >At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome A-related contains 7 WD-40 repeats (PF00400) (1 below cutoff); similar to phytochrome A supressor spa1 (GI:4809171) [Arabidopsis thaliana] Length = 794 Score = 29.1 bits (62), Expect = 2.1 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYG-LPQKRLYGHSHFISD 247 T+ GH+ ++ + ++SSS D TL +W L+ + P GH++ + Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714 Query: 248 VVLSSDGNYALSGS 289 V LS Y +GS Sbjct: 715 VGLSVSDGYIATGS 728 >At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome A-related contains 7 WD-40 repeats (PF00400) (1 below cutoff); similar to phytochrome A supressor spa1 (GI:4809171) [Arabidopsis thaliana] Length = 794 Score = 29.1 bits (62), Expect = 2.1 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = +2 Query: 71 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYG-LPQKRLYGHSHFISD 247 T+ GH+ ++ + ++SSS D TL +W L+ + P GH++ + Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714 Query: 248 VVLSSDGNYALSGS 289 V LS Y +GS Sbjct: 715 VGLSVSDGYIATGS 728 >At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); similar to guanine nucleotide-binding protein beta 5 (GI:1001939) [Mesocricetus auratus] Length = 425 Score = 28.7 bits (61), Expect = 2.8 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 G G ++ +A +P M+ S +T +++ E Y L +G ++ V S Sbjct: 210 GQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNMELLYVL-----HGQEGGVTHVQFS 264 Query: 260 SDGNYALSGS-WDKTLRLWDL 319 DGNY +G D + WD+ Sbjct: 265 KDGNYLYTGGRKDPYILCWDI 285 >At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat family protein contains 5 WD-40 repeats (PF00400); related to TGF-beta resistance-associated protein TRAG (GI:15624071) {Mus musculus}; similar to beta-transducin repeats containing protein - Homo sapiens,PID:e1284220; 3' EST no_NP:TC8031 Length = 1446 Score = 28.7 bits (61), Expect = 2.8 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 278 LSGSWDKTLRLWDLAAGKTTRRFEDH 355 +SGS D T+R+WDL +G H Sbjct: 553 ISGSMDCTIRIWDLESGNVIMIMHHH 578 >At3g45370.1 68416.m04898 hypothetical protein Length = 224 Score = 28.7 bits (61), Expect = 2.8 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = -2 Query: 340 PGCLSSGKIPKPESFVPGTGKSVISITGQYNVRNEM 233 PG + +P P FVPG GQ N+ NEM Sbjct: 75 PGDMGPDFVPAPRDFVPGQVIHPGKFFGQTNLSNEM 110 >At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to serine/threonine kinase receptor associated protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus]; UNR-interacting protein GB:NP_009109 [Homo sapiens] Length = 341 Score = 28.7 bits (61), Expect = 2.8 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = +2 Query: 80 GHNGWITQIATNPKYPD--MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 GH+ + + +P PD ++S+S+D + L ET + GH + Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPM---LRNGETGDWIGT--FEGHKGAVWSSC 68 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 349 L ++ A S S D + +LWD G FE Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE 100 >At5g60050.1 68418.m07530 PRLI-interacting factor-related contains weak similarity to PRLI-interacting factor G (GI:11139264) [Arabidopsis thaliana] Length = 499 Score = 28.3 bits (60), Expect = 3.6 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = +2 Query: 149 RDKTLIVWKLTRDETNYGLPQKRLYGHSH 235 R+ ++++KL R+E +Y + + LYG H Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCH 299 >At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat family protein Similar to U4/U6 small nuclear ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens]; contains 4 WD-40 repeats Length = 276 Score = 28.3 bits (60), Expect = 3.6 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 7/65 (10%) Frame = +2 Query: 140 SSSRD-KTLIVWKLTRDETNYGLPQKR-----LYGHSHFISDVVLSS-DGNYALSGSWDK 298 S SRD K L+ L+ + +PQ L GH ++DVV SS D + S D+ Sbjct: 70 SLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDR 129 Query: 299 TLRLW 313 T ++W Sbjct: 130 TEKIW 134 Score = 28.3 bits (60), Expect = 3.6 Identities = 22/64 (34%), Positives = 27/64 (42%) Frame = +2 Query: 140 SSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 SS D VW L R N + Q GH + V S +G + SG D R+WDL Sbjct: 147 SSGFDSLARVWDL-RTARNILIFQ----GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201 Query: 320 AAGK 331 K Sbjct: 202 RMRK 205 >At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat family protein contains 10 WD-40 repeats (PF00400); similar to 66kDa stress protein (SWISS-PROT: P90587)[ Physarum polycephalum (Slime mold)] Length = 474 Score = 28.3 bits (60), Expect = 3.6 Identities = 23/84 (27%), Positives = 36/84 (42%) Frame = +2 Query: 83 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 262 H+ ++ I +P I SS K +I T D+ + GH I V S Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASED---GHKGSIYAVSWSP 106 Query: 263 DGNYALSGSWDKTLRLWDLAAGKT 334 D L+ S DK+ ++W++A T Sbjct: 107 DSKRVLTVSADKSAKVWEVAEDGT 130 >At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40 repeats domain (PF00400) (6 weak) Length = 1120 Score = 28.3 bits (60), Expect = 3.6 Identities = 19/73 (26%), Positives = 36/73 (49%) Frame = +2 Query: 98 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 277 T +A +P+ ++I D T+ ++ + DE + +L GHS I+ + S+ N Sbjct: 869 TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEV-----KSKLKGHSKRITGLAFSNVLNVL 923 Query: 278 LSGSWDKTLRLWD 316 +S D L +W+ Sbjct: 924 VSSGADAQLCVWN 936 Score = 27.5 bits (58), Expect = 6.4 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +2 Query: 293 DKTLRLWDLAAGKTTRRFEDH 355 DKT+++WD A G FE H Sbjct: 485 DKTIKVWDAATGVKRYTFEGH 505 >At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40 repeats domain (PF00400) (6 weak) Length = 1120 Score = 28.3 bits (60), Expect = 3.6 Identities = 19/73 (26%), Positives = 36/73 (49%) Frame = +2 Query: 98 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 277 T +A +P+ ++I D T+ ++ + DE + +L GHS I+ + S+ N Sbjct: 869 TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEV-----KSKLKGHSKRITGLAFSNVLNVL 923 Query: 278 LSGSWDKTLRLWD 316 +S D L +W+ Sbjct: 924 VSSGADAQLCVWN 936 Score = 27.5 bits (58), Expect = 6.4 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +2 Query: 293 DKTLRLWDLAAGKTTRRFEDH 355 DKT+++WD A G FE H Sbjct: 485 DKTIKVWDAATGVKRYTFEGH 505 >At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1 significant) WD-40 repeats (PF0400); similar to Trp-Asp repeat protein (PIR:T40094) [Schizosaccharomyces] Length = 445 Score = 28.3 bits (60), Expect = 3.6 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = +2 Query: 188 ETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 319 + N G L GH F DG +G+ DKT R+WD+ Sbjct: 303 DPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDI 346 >At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to UNR-interacting protein (WD-40 repeat protein PT-WD) (SP:Q9Y3F4) [Homo sapiens] Length = 343 Score = 28.3 bits (60), Expect = 3.6 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = +2 Query: 80 GHNGWITQIATNPKYPD--MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 GH+ + + +P PD ++S+S+D + L ET + GH + Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 349 L ++ A S S D + +LWD G FE Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE 100 >At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to UNR-interacting protein (WD-40 repeat protein PT-WD) (SP:Q9Y3F4) [Homo sapiens] Length = 343 Score = 28.3 bits (60), Expect = 3.6 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Frame = +2 Query: 80 GHNGWITQIATNPKYPD--MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 GH+ + + +P PD ++S+S+D + L ET + GH + Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68 Query: 254 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 349 L ++ A S S D + +LWD G FE Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE 100 >At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat family protein similar to signal transducer and activator of transcription interacting protein 1 (GI:15929722) {Mus musculus}; similar to hypothetical protein GB:AAD43147 GI:5430747 from (Arabidopsis thaliana); contains Pfam PF00400: WD domain, G-beta repeat (11 copies, 2 weak) Length = 840 Score = 28.3 bits (60), Expect = 3.6 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Frame = +2 Query: 74 LCGHNGWITQIA------TNPKYPD--MILSSSRDKTLIVWKL 178 L GH WI + T + P+ M++SSS+DK + +WKL Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261 Score = 27.9 bits (59), Expect = 4.8 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = +2 Query: 179 TRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 313 +++ N+ + QK GH ++DV + G Y LS S D+T R++ Sbjct: 399 SKESENWQM-QKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVF 442 Score = 27.1 bits (57), Expect = 8.4 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 12/52 (23%) Frame = +2 Query: 56 LKLRGTLCGHNGWITQIATNPKYPDMI------------LSSSRDKTLIVWK 175 + + L GH W+ + P D I LS+S DKT+++W+ Sbjct: 294 ISVESVLIGHEDWVYSVEWQPPVIDFIDGRLVNHQPLSILSASMDKTMMIWR 345 >At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 protein (SCD1) contains Pfam PF02141: DENN (AEX-3) domain; contains Pfam PF00400: WD domain, G-beta repeat (8 copies); identical to stomatal cytokinesis defective [Arabidopsis thaliana] GI:19743728; supporting cDNA gi|19743727|gb|AY082605.1|; PMID 12874123 Length = 1187 Score = 28.3 bits (60), Expect = 3.6 Identities = 24/104 (23%), Positives = 47/104 (45%) Frame = +2 Query: 50 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 229 +T +L L GH+ ++ + + +L+++ D T+ +W + D + + Sbjct: 927 QTTQLLEELKGHDSQVSCVKMLSG--ERVLTAAHDGTVKMWDVRTDMCVATVGRCS---- 980 Query: 230 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 S +S S G A +G D +WD+ +GK + + HTK Sbjct: 981 SAILSLEYDDSTGILAAAGR-DTVANIWDIRSGKQMHKLKGHTK 1023 >At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat family protein similar to Sec31p (GI:13928450) {Oryza sativa} Length = 969 Score = 28.3 bits (60), Expect = 3.6 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%) Frame = +2 Query: 74 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 253 L H G + + N K P+ + S + D T+ +W D N P L G ++ + Sbjct: 111 LSKHKGPVRGLEFNVKSPNQLASGADDGTVCIW----DLANPSKPSHYLKGTGSYMQSEI 166 Query: 254 LSSDGNYAL-----SGSWDKTLRLWDL 319 S N S S + T +WD+ Sbjct: 167 SSLSWNKGFQHVLASTSHNGTTVIWDV 193 >At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10 WD-40 repeats (PF00400) (1 weak) Length = 1131 Score = 28.3 bits (60), Expect = 3.6 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +2 Query: 293 DKTLRLWDLAAGKTTRRFEDH 355 DKT+++WD A G FE H Sbjct: 485 DKTIKVWDAATGVKRHTFEGH 505 Score = 28.3 bits (60), Expect = 3.6 Identities = 19/73 (26%), Positives = 36/73 (49%) Frame = +2 Query: 98 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 277 T +A +P+ ++I D T+ ++ + DE + +L GHS I+ + S+ N Sbjct: 880 TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEV-----KSKLKGHSKRITGLAFSNVLNVL 934 Query: 278 LSGSWDKTLRLWD 316 +S D L +W+ Sbjct: 935 VSSGADAQLCVWN 947 >At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10 WD-40 repeats (PF00400) (1 weak) Length = 1131 Score = 28.3 bits (60), Expect = 3.6 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +2 Query: 293 DKTLRLWDLAAGKTTRRFEDH 355 DKT+++WD A G FE H Sbjct: 485 DKTIKVWDAATGVKRHTFEGH 505 Score = 28.3 bits (60), Expect = 3.6 Identities = 19/73 (26%), Positives = 36/73 (49%) Frame = +2 Query: 98 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 277 T +A +P+ ++I D T+ ++ + DE + +L GHS I+ + S+ N Sbjct: 880 TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEV-----KSKLKGHSKRITGLAFSNVLNVL 934 Query: 278 LSGSWDKTLRLWD 316 +S D L +W+ Sbjct: 935 VSSGADAQLCVWN 947 >At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 WD-40 repeats (PF00400);low similarity to photomorphogenesis repressor (COP1) GI:2702280 [Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea nil] Length = 343 Score = 27.9 bits (59), Expect = 4.8 Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Frame = +2 Query: 80 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 259 GH+ + + + P+++ + S D W + RD + H+ + + + Sbjct: 161 GHDFELWTASFDLNNPNLVYTGSDDCKFSCWDI-RDSPADNRVFQNSKVHTMGVCCISSN 219 Query: 260 SDGNYAL-SGSWDKTLRLWD 316 Y++ +GS+D+TLR+WD Sbjct: 220 PSDPYSIFTGSYDETLRVWD 239 >At5g18420.3 68418.m02170 expressed protein non-consensus GC donor splice site at exon 1, unknown (C40) protein, Homo sapiens, EMBL:AF103798 Length = 439 Score = 27.9 bits (59), Expect = 4.8 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -3 Query: 162 RVLSRDEDKIMSGYLGLVAI*VIQPLWPQSVPLSFNV---SLIFINP 31 R+ S D D+ +SG+LG + + + P W + P + V L++I+P Sbjct: 196 RIGSGDRDEALSGFLGNLTMGGLGPRWIRPCPPRYPVHQSELLWIDP 242 >At5g18420.2 68418.m02169 expressed protein non-consensus GC donor splice site at exon 1, unknown (C40) protein, Homo sapiens, EMBL:AF103798 Length = 442 Score = 27.9 bits (59), Expect = 4.8 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -3 Query: 162 RVLSRDEDKIMSGYLGLVAI*VIQPLWPQSVPLSFNV---SLIFINP 31 R+ S D D+ +SG+LG + + + P W + P + V L++I+P Sbjct: 199 RIGSGDRDEALSGFLGNLTMGGLGPRWIRPCPPRYPVHQSELLWIDP 245 >At5g18420.1 68418.m02168 expressed protein non-consensus GC donor splice site at exon 1, unknown (C40) protein, Homo sapiens, EMBL:AF103798 Length = 441 Score = 27.9 bits (59), Expect = 4.8 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -3 Query: 162 RVLSRDEDKIMSGYLGLVAI*VIQPLWPQSVPLSFNV---SLIFINP 31 R+ S D D+ +SG+LG + + + P W + P + V L++I+P Sbjct: 199 RIGSGDRDEALSGFLGNLTMGGLGPRWIRPCPPRYPVHQSELLWIDP 245 >At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At5g28170, At1g35110, At1g44880, At3g42530, At4g19320, At5g36020, At3g43010, At2g10350 Length = 1043 Score = 27.9 bits (59), Expect = 4.8 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = +2 Query: 116 PKYPDMILSSSRDKTLIVWK-LTRDETNYGLPQ 211 P D++L S KT+++WK LT + LPQ Sbjct: 220 PGLLDLVLDDSTSKTILLWKRLTHPKQVISLPQ 252 >At3g33230.1 68416.m04296 hypothetical protein Length = 154 Score = 27.9 bits (59), Expect = 4.8 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = -2 Query: 340 PGCLSSGKIPKPESFVPGTGKSVISITGQYNVRNEM 233 PG + +P P FVPG GQ N+ NEM Sbjct: 6 PGDMGPDFVPAPRDFVPGEVIWPGKFFGQTNLSNEM 41 >At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam profile: PF00400 WD domain, G-beta repeat (7 copies) Length = 1135 Score = 27.5 bits (58), Expect = 6.4 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = +2 Query: 293 DKTLRLWDLAAGKTTRRFEDH 355 DKT+++WD G FE H Sbjct: 487 DKTIKVWDAVTGNKLHTFEGH 507 >At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam profile: PF00400 WD domain, G-beta repeat (7 copies) Length = 1137 Score = 27.5 bits (58), Expect = 6.4 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = +2 Query: 293 DKTLRLWDLAAGKTTRRFEDH 355 DKT+++WD G FE H Sbjct: 487 DKTIKVWDAVTGNKLHTFEGH 507 >At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) identical to phytochrome A supressor spa1 (GI:4809171) [Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam PF00400) (1 weak) Length = 1029 Score = 27.5 bits (58), Expect = 6.4 Identities = 9/31 (29%), Positives = 17/31 (54%) Frame = +2 Query: 269 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 361 NY S +D +++WD G+ ++ +H K Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQK 809 >At2g14340.1 68415.m01604 hypothetical protein Length = 220 Score = 27.5 bits (58), Expect = 6.4 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = -2 Query: 340 PGCLSSGKIPKPESFVPGTGKSVISITGQYNVRNEM 233 PG + S +P P F+PG GQ N+ +EM Sbjct: 72 PGDMGSDFVPAPRDFIPGEVIWPGKFFGQTNLSDEM 107 >At1g79360.1 68414.m09248 transporter-related low similarity to SP|O76082 Organic cation/carnitine transporter 2 (Solute carrier family 22, member 5) (High-affinity sodium-dependent carnitine cotransporter) {Homo sapiens}; contains Pfam profile PF00083: major facilitator superfamily protein Length = 527 Score = 27.5 bits (58), Expect = 6.4 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = -2 Query: 466 NSSASQRHKTLIFCLV*ALNTFSTLFLPKVKVLSHLSMV 350 +SS +++ + CLV A++T T+F P + V + L V Sbjct: 136 DSSLGRKNMLFLSCLVMAISTMLTVFSPNIWVYAVLRFV 174 >At1g54440.1 68414.m06210 3'-5' exonuclease domain-containing protein / helicase and RNase D C-terminal domain-containing protein / HRDC domain-containing protein similar to SP|Q01780 Polymyositis/scleroderma autoantigen 2 {Homo sapiens}; contains Pfam profiles PF00570: HRDC domain, PF01612: 3'-5' exonuclease Length = 738 Score = 27.5 bits (58), Expect = 6.4 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = +3 Query: 303 SGFGILPLERQPGVSKTILRCDRTFTFGRNSVENVFSAYTRQKISV 440 SGFG+LPL+R+ KT++ + + E S+ + +K+ V Sbjct: 566 SGFGVLPLKRKLESDKTVVEKNIEPKIEKTGTEASASSLSSKKVCV 611 >At5g40900.1 68418.m04966 expressed protein similar to GI:2827651, GI:7527728, GI:4406788,GI:6063544, GI:10764853 from [Arabidopsis thaliana]; expression supported by MPSS Length = 248 Score = 27.1 bits (57), Expect = 8.4 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -2 Query: 532 DDCRLRMPRREHPHGFQHQYVPNSSASQRHKTLI 431 DD LR R HPH + H+Y S S + L+ Sbjct: 39 DDQALRYCLRAHPHCYLHRYSRKKSESLKPDGLV 72 >At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40 repeats (PF00400) (2 weak) Length = 1108 Score = 27.1 bits (57), Expect = 8.4 Identities = 17/74 (22%), Positives = 34/74 (45%) Frame = +2 Query: 98 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 277 T +A +P+ ++I D T+ ++ + DE + +L GH I+ + S+ N Sbjct: 865 TFLAFHPQDNNVIAIGMEDSTIHIYNVRVDEV-----KSKLKGHQKRITGLAFSTALNIL 919 Query: 278 LSGSWDKTLRLWDL 319 +S D + W + Sbjct: 920 VSSGADAQICFWSI 933 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,956,578 Number of Sequences: 28952 Number of extensions: 273685 Number of successful extensions: 1439 Number of sequences better than 10.0: 206 Number of HSP's better than 10.0 without gapping: 947 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1362 length of database: 12,070,560 effective HSP length: 77 effective length of database: 9,841,256 effective search space used: 1053014392 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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