Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_H08
(490 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 66 1e-11
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 56 1e-08
11_02_0011 - 7337618-7338496,7338596-7338991 52 2e-07
11_02_0012 - 7346282-7347136,7347234-7347593 52 3e-07
05_06_0044 - 25150322-25151260 51 6e-07
04_04_0619 + 26652923-26653267,26653440-26654273 48 5e-06
01_01_1152 + 9170628-9171899 45 3e-05
11_01_0750 - 6315126-6315896,6316371-6316784 44 5e-05
04_04_0620 + 26656072-26656417,26656585-26657396 43 1e-04
01_06_0824 - 32243495-32244319,32244449-32244859 40 8e-04
11_01_0767 + 6438648-6438809,6439146-6440000 37 0.010
06_03_0902 - 25806912-25807190,25807876-25808094,25809469-258097... 31 0.50
11_03_0058 - 9380926-9381062,9382003-9382413,9382561-9382786 30 1.1
11_01_0771 + 6453130-6454488 30 1.1
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 29 2.6
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 29 2.6
07_01_0008 - 56178-57095 28 4.6
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765... 28 4.6
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 27 6.1
06_03_1451 + 30252366-30252373,30252621-30252867,30253441-302538... 27 6.1
02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715 27 6.1
02_03_0065 - 14629676-14629804,14631119-14631247,14631383-146317... 27 6.1
08_01_1069 + 10916376-10916448,10917331-10918031,10918222-109184... 27 8.1
07_03_0699 + 20772415-20773450,20789050-20789606,20790971-207915... 27 8.1
05_07_0096 - 27663415-27664086 27 8.1
03_04_0130 + 17543991-17545758,17545889-17545971,17546396-17546467 27 8.1
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 27 8.1
01_05_0403 - 21817691-21817747,21818070-21818171,21818184-218182... 27 8.1
01_01_0922 + 7278912-7279274,7281449-7281572,7282489-7282604,728... 27 8.1
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 66.5 bits (155), Expect = 1e-11
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 10/164 (6%)
Frame = +3
Query: 3 FNASETKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQLVELPYKESG----FRMLV 170
F+AS+TK+ +FH+ V+ P MS + + L ++++LPY++ G F M +
Sbjct: 260 FDASKTKDGEFHLLDGKSVQAPFMSTSKKQYILSYDNL--KVLKLPYQQGGDKRQFSMYI 317
Query: 171 LLPDKLDGLSSVLDKA-GEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLMPKFGV 347
LLP+ DGL S+ +K E LE R + ++PKF+I + L+ G+
Sbjct: 318 LLPEAQDGLWSLAEKLNSEPEFLEKHIPTRQVT-VGQFKLPKFKISFGFEASDLLKSLGL 376
Query: 348 SKIFNEPAP-----NIVKGDSVVVSEAFQEAFITVDEEGATAGA 464
F+ A + +G ++ VS F ++F+ V+EEG A A
Sbjct: 377 HLPFSSEADLTEMVDSPEGKNLFVSSVFHKSFVEVNEEGTEAAA 420
Score = 65.3 bits (152), Expect = 2e-11
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 10/164 (6%)
Frame = +3
Query: 3 FNASETKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQLVELPYKESG----FRMLV 170
F+ S+T++ +FH+ V+ P MS + + + L+ +++LPY + G F M +
Sbjct: 512 FDVSKTEDGEFHLLDGESVQAPFMSTRKKQYLSSYDSLK--VLKLPYLQGGDKRQFSMYI 569
Query: 171 LLPDKLDGLSSVLDKA-GEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLMPKFGV 347
LLP+ DGL S+ +K E +E+ +RP + + ++PKF+I L+ G+
Sbjct: 570 LLPEAQDGLWSLAEKLNSEPEFMENHIPMRPVH-VGQFKLPKFKISFGFGASGLLKGLGL 628
Query: 348 SKIFNEPAPNIVKGDS-----VVVSEAFQEAFITVDEEGATAGA 464
+F I DS + VS F ++FI V+EEG A A
Sbjct: 629 PLLFGSEVDLIEMVDSPGAQNLFVSSVFHKSFIEVNEEGTEATA 672
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 56.4 bits (130), Expect = 1e-08
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Frame = +3
Query: 3 FNASETKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQLVELPYKESG----FRMLV 170
F+AS+TK+ +F + V P MS + + + L+ +++LPY++ F M +
Sbjct: 52 FDASKTKDGEFRLLDGKSVLAPFMSTSKKQYLSSYDSLK--VLKLPYQKGRDLRQFSMYI 109
Query: 171 LLPDKLDGLSSVLDKA-GEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLMPKFGV 347
LLP+ DGL S+ K E LE R K ++PKF+I + L+ G+
Sbjct: 110 LLPEAQDGLWSLAAKLNSEPEFLEKRIPTRQVT-VGKFKLPKFKISFGFEASDLLKILGL 168
Query: 348 SKIFNEPAP-----NIVKGDSVVVSEAFQEAFITVDEEGATAGA 464
F+ A + ++ VS F ++F+ VDEEG A A
Sbjct: 169 QLPFSSKADLTGMVGSPERHNLFVSSLFHKSFVQVDEEGTEAAA 212
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 52.0 bits (119), Expect = 2e-07
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Frame = +3
Query: 153 GFRMLVLLPDKLDGLSSVLDKAGEKGLLEDVFR-LRPTNRKV--KLEMPKFEIKSKLDLK 323
G M + LPD+ DGL +++DK R RPT R+ L +P+F++ +
Sbjct: 261 GLSMYIFLPDERDGLPALVDKMAASSSSSSFLRDHRPTRRREVGDLRVPRFKVSFYSQIN 320
Query: 324 PLMPKFGVSKIFNEPAPNI--------VKGDSVVVSEAFQEAFITVDEEGATAGAFNWCS 479
++ GV+ F+ ++ +G +VV E F A + V+EEG A A C+
Sbjct: 321 GVLQGMGVTAAFDAGEADLSGMAEGVDQRGGGLVVEEVFHRAVVEVNEEGTEAAASTACT 380
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 51.6 bits (118), Expect = 3e-07
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Frame = +3
Query: 153 GFRMLVLLPDKLDGLSSVLDK--AGEKGLLEDVFRL--RPTNRKVK---LEMPKFEIKSK 311
G M + LPD DGL +++DK G F RP R++K L +P+F++
Sbjct: 241 GLSMYIFLPDARDGLPALVDKMAVASSGTASSSFLRDHRPGRRRIKVGDLRVPRFKVSFY 300
Query: 312 LDLKPLMPKFGVSKIFNEPAPNI---VKGDSVVVSEAFQEAFITVDEEGATAGAFNWCS 479
++ ++ G+ F+ ++ + G+ VVV + A + V+EEG A A C+
Sbjct: 301 SEMNEVLKGMGIGAAFDVGKVDLSGMIDGELVVVEKVMHRAVVEVNEEGTEAAAATACT 359
>05_06_0044 - 25150322-25151260
Length = 312
Score = 50.8 bits (116), Expect = 6e-07
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 17/166 (10%)
Frame = +3
Query: 18 TKEKDFHVDSTTIVKKPTMS-LLQPLFYTENKELEAQLVELPYKESG-------FRMLVL 173
T+E DFHV V+ P M+ Q F ++ + Y+ G F M +
Sbjct: 99 TEEGDFHVSPDHDVRVPFMAGSHQHAFMDVGCHPGFNVLRMMYRTGGAAGGDKMFAMYIY 158
Query: 174 LPDKLDGLSSVLDKAGEKG---LLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLMPKFG 344
LPD DGL + K L + +P +L++PKFE+ K++ L+ +FG
Sbjct: 159 LPDDRDGLPELARKLASNPAAFLRRTIVPAQPV-AVGELKIPKFEVSLKVEASRLLREFG 217
Query: 345 VSKIFNEPAPNIVKG------DSVVVSEAFQEAFITVDEEGATAGA 464
+ F A N G VS + F+ V+EEG A A
Sbjct: 218 LDLPFLPAADNSFSGMLLDPPQGTAVSSLLHQCFVNVNEEGTVAAA 263
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 47.6 bits (108), Expect = 5e-06
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 21/183 (11%)
Frame = +3
Query: 3 FNASETKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQLVELPYKESG--------- 155
F + +T+ + FH T V P +S + + L ++++L YK G
Sbjct: 166 FESYDTQRRRFHRQDGTRVTVPFLSDPRTHYAARFDGLGFKVLQLFYKMVGHDGQVHFGA 225
Query: 156 --FRMLVLLPDKLDGLSSVLDKAGEKGLLEDVFRLRPTNRK--VKLEMPKFEIKSKLDLK 323
F MLV LP K DGL +L A + + V R P + + +PKF+ S+LD +
Sbjct: 226 PCFCMLVFLPIKRDGLRHLLRMAVTEP--DFVMRCVPRSEQEVSPCMVPKFKFSSELDAR 283
Query: 324 PLMPKFGVSKIFNEPAPNIVK--------GDSVVVSEAFQEAFITVDEEGATAGAFNWCS 479
+ K G+ F+ A ++ + + + VS Q+ + VDEEG TA + S
Sbjct: 284 GALAKLGLGAPFDPLAADLSRMAVSVNTPPERLYVSAMRQKCAVEVDEEGTTAVEATY-S 342
Query: 480 CCT 488
CC+
Sbjct: 343 CCS 345
>01_01_1152 + 9170628-9171899
Length = 423
Score = 45.2 bits (102), Expect = 3e-05
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Frame = +3
Query: 3 FNASETKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQLVELPYKESG--------- 155
F+ S T FH+ V+ P M+ P ++LPYK G
Sbjct: 206 FHPSATFHAPFHLLDGGAVRAPFMTTEIPFERHVAAFPGFTALKLPYKNVGGGGGGDGVP 265
Query: 156 ---FRMLVLLPDKLDGLSSVLDKAGEKGLLEDVFRLRPTNRKV---KLEMPKFEIKSKLD 317
F ML+LLPD DG + D + + + +L +PKF+ K +
Sbjct: 266 RAAFYMLLLLPDG-DGALKLADLYDMAVTTPEFIKKHTPAAEAPVRRLMVPKFKFSFKFE 324
Query: 318 LKPLMPKFGVSKIF--NEPAPNIVKGDSVVVSEAFQEAFITVDEEGATAGA 464
K M K GV++ F + + + GD + ++E + +A I VDE G A A
Sbjct: 325 AKSDMRKLGVTRAFAGGDFSGMVTGGDGLFIAEVYHQATIEVDELGTVAAA 375
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 44.4 bits (100), Expect = 5e-05
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Frame = +3
Query: 18 TKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQLVELPYK----ESGFRMLVLLPDK 185
T E+ F+ T V+ P + + + + + +++LPYK E F M + LPD
Sbjct: 194 TTEQKFYCLDGTSVEVPFVEYDRTRLFAVHDNFK--VIKLPYKQGKNERKFSMYIFLPDD 251
Query: 186 LDGLSSVLDKA-GEKGLLEDVFRLRPTNR-KVKLEMPKFEIKSKLDLKPLMPKFGVSKIF 359
DGL + K E LE PT + V + +P F+I ++D+K + G+ F
Sbjct: 252 HDGLFELTQKIFSEPMFLEQHL---PTEKCHVGISVPNFKISFQIDVKDFLKDMGLELPF 308
Query: 360 NEPA--PNIVKGDS----VVVSEAFQEAFITVDEEG 449
A +++K D + +S+ +A + VD++G
Sbjct: 309 LREAEFSDMIKEDDSSGPLFLSDVLHKAVLEVDQKG 344
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 43.2 bits (97), Expect = 1e-04
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Frame = +3
Query: 156 FRMLVLLPDKLDGLSSVLDKAGEKGLLEDVFRLRPTNRKV--KLEMPKFEIKSKLDLKPL 329
F MLV LP K DGL +L A + + V R P +R++ ++PKF+ S+LD
Sbjct: 221 FCMLVFLPIKRDGLRHLLRMAVTEP--DFVTRCVPRSRQIVTPCKVPKFKFSSQLDAGGA 278
Query: 330 MPKFGVSKIFNEPAPNIVK------GDSVVVSEAFQEAFITVDEEGATA 458
+ + G+ F+ A ++ + + VS Q+ + VDEEG TA
Sbjct: 279 LAQLGLGAPFDPDAADLSRMAVNTPPAGLYVSTMRQKCAVEVDEEGTTA 327
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 40.3 bits (90), Expect = 8e-04
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Frame = +3
Query: 156 FRMLVLLPDKLDGLSSVLDK--AGEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPL 329
F M + LPD+ GL +L K + L+E L +P+F + K +
Sbjct: 247 FSMYIYLPDERHGLPDMLRKLCSDPAALIESSAALTEKVPVGAFMVPRFTLSYKTNAAET 306
Query: 330 MPKFGVSKIFNEPAPNIVK-------GDSVVVSEAFQEAFITVDEEGATAGA 464
+ + G+ F P ++ + + +VVS + E+F+ V+EEG A A
Sbjct: 307 LRQLGLRLPFEYPGADLSEMVESSPEAEKIVVSAVYHESFVEVNEEGTEAAA 358
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 36.7 bits (81), Expect = 0.010
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Frame = +3
Query: 129 VELPYKESGFRMLVLLPDKLDGLSSVLDKAGEKGLLEDVFRLRPTNRKV-KLEMPKFEIK 305
++L Y F MLV LPD DGL +LD+ D L P V + +PKF++
Sbjct: 160 LKLRYSLPSFAMLVFLPDDRDGLPGLLDRITASPEFVDE-HLPPGCVPVGRFRVPKFKLA 218
Query: 306 -SKLDLKPLMPKFGVSKIFN----EPAPNIVKGD----SVVVSEAFQEAFITVDEEGATA 458
+ ++ G+ F+ E + V+GD ++ VS + + V+EEG+ A
Sbjct: 219 FCHYGIADVLRGLGLRLPFDMFAAEMSGIAVEGDGEDAAMFVSSVIHKVVVEVNEEGSEA 278
Query: 459 GAF 467
A+
Sbjct: 279 AAY 281
>06_03_0902 -
25806912-25807190,25807876-25808094,25809469-25809711,
25809810-25809974,25810141-25810721,25810940-25811048,
25811158-25811250,25811474-25811535,25811895-25811967,
25812879-25813007,25814107-25814229
Length = 691
Score = 31.1 bits (67), Expect = 0.50
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Frame = +3
Query: 18 TKEKDFHVDSTTIVKKPTMSLLQPLFYTENK--ELEAQLVEL--PYKESGFRMLVLLPDK 185
TK KD V+ KK L Q + K +L+ EL Y E + + +K
Sbjct: 389 TKVKDLEVELEATKKKDKEILHQAVLTEREKITQLQWDKDELYRKYSEMESNLKIEQNEK 448
Query: 186 LDGLSSVLDKAGEKG-LLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLM 332
S +GEK LLE++ R ++ + +FE KSK D+K L+
Sbjct: 449 TRVQSEKTTASGEKEMLLEELETKRKEVESLQQHIGEFEAKSKADIKVLV 498
>11_03_0058 - 9380926-9381062,9382003-9382413,9382561-9382786
Length = 257
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -1
Query: 151 DSLYGNSTSC--ASSSLFSV*NNGCSRLMVGFFTMVVES 41
D++ N+T+C S SL + GCSR++ GF V+++
Sbjct: 196 DAMDTNATACFATSESLAGIYGEGCSRVVAGFVLSVLKA 234
>11_01_0771 + 6453130-6454488
Length = 452
Score = 29.9 bits (64), Expect = 1.1
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Frame = +3
Query: 156 FRMLVLLPDKLDGLSSVLDK-AGEKGLLEDVFRLRPTNRKVKLEMPKFEIKSKLDLKPLM 332
+ M + LPD DGL ++++ A G L + + +PKF++ + +
Sbjct: 294 YAMAIFLPDARDGLRGLVERMASRPGFLHEHMPAAWPVPVGEFRVPKFKVSCGGSVVGAL 353
Query: 333 PKFGVSKIFNEPAPNI---VKGDS----VVVSEAFQEAFITVDEEGATAGA 464
+ G+ F+ ++ V+ D + V + +A I V+EEG A A
Sbjct: 354 EQLGLRLPFSPELADLSDMVEDDGSGWPLFVGDIQHKAVIEVNEEGTVAAA 404
>09_02_0286 -
6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 354 IFNEPAPNIVKGDSVVVSEAFQEAFITVDEEGATA 458
+F PAP I G+ AF+ A + D +GA A
Sbjct: 20 LFRAPAPAIAVGEEAAALLAFRRASVADDPDGALA 54
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -1
Query: 259 GLSLNTSSRRPFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASS 113
G+S +S FS + S ++ S+SG+ + S YG S S ++S
Sbjct: 289 GMSYGSSGAGSFSGSSSGSNSNAGSMSGANSGAGSSSSAYGASGSGSNS 337
>07_01_0008 - 56178-57095
Length = 305
Score = 27.9 bits (59), Expect = 4.6
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = -1
Query: 280 NFTFLLVGLSLNTSSRRPFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSLFS 101
N T + L L+ +SRRP P LS PS+L RT KP L G ++S + +LF+
Sbjct: 140 NATSATLQLRLSATSRRPALPLLSLHPLPPSALLLLRT---KP-MLAGFTSSATNCTLFA 195
>03_02_0774 +
11074508-11074880,11076270-11076370,11076453-11076509,
11076596-11076690,11077480-11077579,11078272-11078330,
11078874-11079001,11079362-11079440,11079708-11079795,
11080490-11080590,11080822-11080900,11081740-11081850,
11082655-11082750,11082885-11083007,11085750-11085947,
11086071-11086172,11086570-11086634,11086888-11087008,
11088540-11088697,11088823-11088973,11089414-11089521,
11089939-11090031,11090285-11090321,11090659-11090906,
11091396-11091542,11091929-11092099,11092166-11092175,
11093360-11093505
Length = 1114
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = -1
Query: 292 FGISNFTFLLVGLSLNTSSRRPFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSC 122
+G SN ++ + N S P + + S+ DD L GSR NI + SL G + SC
Sbjct: 297 YGGSNAYHKILNGATNAESA-PSTNSASSIDDSREGLVGSRRNILRYGSL-GIAVSC 351
>07_01_0747 -
5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = -3
Query: 77 THGWL---LHDGCRVNMEIFLFSFTCVE 3
T WL L GCRV ++ FLFSF E
Sbjct: 178 TSEWLNEVLPSGCRVGIDPFLFSFDAAE 205
>06_03_1451 +
30252366-30252373,30252621-30252867,30253441-30253893,
30253971-30254555
Length = 430
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 268 LLVGLSLNTSSRRPFSPALSNTDDKPSSLSGSRTNIRKPDSL 143
+ V SL++ +++ P S T+ SS +TN+RK DSL
Sbjct: 136 ITVAGSLSSKNKKDSGPDSSETNSGISSQFVFQTNVRKKDSL 177
>02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715
Length = 1536
Score = 27.5 bits (58), Expect = 6.1
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 2/130 (1%)
Frame = -1
Query: 469 LKAPAVAPSSSTVINASWKASDTTTLSPLTMFGAGSLNIFETPNLGIKGLRSNLLFISNF 290
LK+P SSS + ASDTT S + G+ L + P + L+ S+
Sbjct: 408 LKSPVSQLSSSKALTVKPGASDTTVKSSPLISGSSKLQHIQ-PGNAVTNLKEQPC-KSSG 465
Query: 289 GISNFTFLLVGLSLNTSSRRPFSPALSNTDDKPSSLSGSRTNIRKPDSLYG--NSTSCAS 116
G + V + SS + + + S + + ++ S+ + R + G TS +S
Sbjct: 466 GTCSPELHTVKEEKSCSSSQSLNNSQSCSSEHAKTIGSSKEDARSSTAASGIAGRTSGSS 525
Query: 115 SSLFSV*NNG 86
S + NNG
Sbjct: 526 SRVHRRTNNG 535
>02_03_0065 -
14629676-14629804,14631119-14631247,14631383-14631736,
14631817-14632063,14632155-14632231,14632574-14632648,
14632721-14632822,14632966-14633084,14633538-14633627,
14634866-14635022,14635085-14635098,14635425-14635548,
14635628-14635678,14635793-14635891,14636962-14637072
Length = 625
Score = 27.5 bits (58), Expect = 6.1
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +3
Query: 51 TIVKKPTMSLLQPLFYTENKELEAQLVELPY--KESGFRMLVLLPDKLDGLSSVLDKAGE 224
T VK P +++PL + K LE+ L E+P+ K F + L ++ + LDKA
Sbjct: 34 TDVKDP---VIRPLVELDTKSLESMLPEVPHWVKNPDFDRIDWLNKFVENIWPYLDKAIC 90
Query: 225 KGLLEDVFRLRPTN-RKVKLEMPKFEIKSKLDLKP 326
K E + N K K++ +FE + L P
Sbjct: 91 KTAKEIAKPIIAENTAKYKIDSVEFETLTLGSLPP 125
>08_01_1069 +
10916376-10916448,10917331-10918031,10918222-10918443,
10918526-10919351,10919437-10919574,10920431-10920569,
10920655-10920781,10921895-10921936,10922089-10922160,
10922491-10922589,10922694-10922735,10922947-10923027,
10923129-10923179,10923265-10923346,10923741-10923835,
10924739-10924810,10924907-10925023,10925176-10925244,
10925507-10925573,10925709-10925950
Length = 1118
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 226 FSPALSNTDDKPSSLSGSRTNIRKPDSLY 140
FS L ++D K S SGSR + KP+ ++
Sbjct: 713 FSAVLPSSDGKRSDKSGSRASGSKPEKIH 741
>07_03_0699 +
20772415-20773450,20789050-20789606,20790971-20791567,
20792258-20792413
Length = 781
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 189 RVCQEVGPTYENQTPCTAIRQAVLQVLYFLYKITVVADSWLAS 61
RV + P N T TA+ +AV + + + D WLAS
Sbjct: 476 RVMDQATPRSRNLTGATALHEAVRHGHVEVVDLLMTTDPWLAS 518
>05_07_0096 - 27663415-27664086
Length = 223
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 126 LVELPYKESGFRMLVLLPDKLDGLSS 203
LV L Y ESG R LPD L G+SS
Sbjct: 87 LVHLLYTESGRRFEAQLPDLLLGVSS 112
>03_04_0130 + 17543991-17545758,17545889-17545971,17546396-17546467
Length = 640
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 264 NRKVKLEMPKFEIKSKLDLKPLMPKFGVSKIFNE 365
N+ +KLE P ++ + DL+ + K G SK FN+
Sbjct: 501 NQSLKLEYPHLDMCLRGDLEENLTKTGRSKRFNQ 534
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 27.1 bits (57), Expect = 8.1
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = -1
Query: 286 ISNFTFLLVGLSLNTSSRRPFSPALSNTDDKPS------SLSGSRTNIRKPDSLYGNSTS 125
+S+ T L G NTS SP+ + T P+ S SG+ + P + G ST+
Sbjct: 198 LSSLTTLKDGNPFNTSIAPSASPSSTPTGSTPTQTPSSPSSSGTPSPSSSPSNSSGGSTA 257
Query: 124 CASSSLFSV*NNGCSRLMVGFFTMVV 47
SSS S + + +VG+ + +
Sbjct: 258 RDSSSPSSRKHKSSTLRIVGYVLLAI 283
>01_05_0403 -
21817691-21817747,21818070-21818171,21818184-21818272,
21818612-21818714,21819938-21820223,21820577-21820725,
21821500-21821612,21821764-21821922,21822272-21822341
Length = 375
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +3
Query: 180 DKLDGLSSVLDKAGEKGLLEDVF-RLRPTNRKVKLEMPKFEIKSKLDLKPLMPKFGVSKI 356
+ ++GLS L +GEKG + ++ +R +N + FE ++ + +I
Sbjct: 132 EPIEGLSGRLGVSGEKGSTQVLYTEIRASNEFSSV----FENSGPNFIQKIRSLSQSDRI 187
Query: 357 FNEPAPNIVKGDSVVVSEAFQEAFITVDEEGATAGA 464
F++P GD+ V ++ + V+ E AGA
Sbjct: 188 FSQPLERGDGGDAEAVPALEEDTALEVEAEVEGAGA 223
>01_01_0922 +
7278912-7279274,7281449-7281572,7282489-7282604,
7282683-7282748,7283379-7283413,7283559-7283601,
7284325-7284362,7284448-7284555,7287195-7287252,
7287862-7288003,7288215-7288426,7288544-7288778,
7288874-7288941,7290329-7290602,7291137-7291249,
7291330-7291390,7292170-7292237,7292585-7292622,
7292699-7292888
Length = 783
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 255 RPTNRKVKLEMPKFEIKSKLDLKPLMPKFGVSK-IFNEP 368
R + +K++ + ++ K+D+K P FG+ K IF +P
Sbjct: 601 RSPSVSIKMQAHEESVRVKMDIKGSQPDFGIDKSIFIKP 639
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,641,747
Number of Sequences: 37544
Number of extensions: 282872
Number of successful extensions: 939
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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