Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_H08
         (490 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   2.3  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   3.1  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   4.0  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   4.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   5.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.0  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -1

Query: 427 NASWKASDTTTLSPLTMFGAGSLNIFETPNLGIKGLRSN-LLFISNFGISNFT 272
           N+ W AS    L+P +  G   L+  E     ++ L  N L  + N    N T
Sbjct: 127 NSVWGASRFLELAPDSFLGLRELHTLEIVESNVQALPVNSLCSLDNLQTLNLT 179


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 467 ESAGCGSFFIYCDKCLL 417
           +SA  G+ +  CD CLL
Sbjct: 97  DSASSGNVYCKCDDCLL 113


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = -1

Query: 232 RPFSPALSNTDDKPSSLSGSRTNIRKPDSLYGNSTSCASSSL 107
           R  SP L+N D  P+  S    N      + GN     +S L
Sbjct: 195 RVLSPPLNNNDATPTDFSMGVKNNHVSSKVEGNGVHEENSPL 236


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -2

Query: 162 YENQTPCTAIRQAVLQVLYFLYKITVVADSWLAS 61
           YE      A    +  +L +L ++ V A +W++S
Sbjct: 310 YEKSLALAAFSLMLTSILRYLQELHVDAPTWISS 343


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 310 NWTLNL*CPSLEFRKYSTSLHQTSS 384
           NW L + C S+  +  ++++HQ  S
Sbjct: 3   NWLLLIVCLSIACQDVTSAIHQRKS 27


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -1

Query: 475 HQLKAPAVAPSSSTVINASWKASDTTTLSPLTMFGAGS 362
           H+  APA   ++ T    +   + TTT +P T   A +
Sbjct: 649 HEPGAPATTITTITTTTTTTTTTTTTTTTPNTTQNASA 686


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 437 YCDKCLLEGFRHYYTVTL 384
           Y ++CLLE  R Y  V L
Sbjct: 399 YLERCLLETLRMYPPVPL 416


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 250 LNTSSRRPFSPALSNTDDKPSSLSGS 173
           LN SSRR      +  D+KP  +S +
Sbjct: 246 LNVSSRRSDMNGTTPLDEKPLDVSSN 271


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,434
Number of Sequences: 438
Number of extensions: 3038
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)