Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_H06
         (487 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          21   7.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.0  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   9.2  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   9.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.2  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    21   9.2  

>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 155 VTFAVVKWAGLRILVR 108
           +TF V KW+ + I+VR
Sbjct: 46  ITFGVNKWSKVCIVVR 61


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 391 TMTSSAVCLANKVNIELNGTRFR 323
           T+ S  VCL + + + ++GT  R
Sbjct: 38  TLCSGQVCLGSVMQLPIHGTEPR 60


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = -1

Query: 220 IWSTEVMLKVPVTYIKLTFPIWLPLL 143
           +++  ++  VPV Y+   +P W  +L
Sbjct: 506 VFTFNIIKFVPVKYLTYEYPWWSHVL 531


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = -1

Query: 220 IWSTEVMLKVPVTYIKLTFPIWLPLL 143
           +++  ++  VPV Y+   +P W  +L
Sbjct: 559 VFTFNIIKFVPVKYLTYEYPWWSHVL 584


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/25 (24%), Positives = 17/25 (68%)
 Frame = -3

Query: 206 SHVESARYVHQIDISYLVTFAVVKW 132
           +H+++A+Y+  I+ +   T  +++W
Sbjct: 364 NHLKNAKYLDVIERNSGATDKIIRW 388


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/25 (24%), Positives = 17/25 (68%)
 Frame = -3

Query: 206 SHVESARYVHQIDISYLVTFAVVKW 132
           +H+++A+Y+  I+ +   T  +++W
Sbjct: 364 NHLKNAKYLDVIERNSGATDKIIRW 388


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/25 (24%), Positives = 17/25 (68%)
 Frame = -3

Query: 206 SHVESARYVHQIDISYLVTFAVVKW 132
           +H+++A+Y+  I+ +   T  +++W
Sbjct: 364 NHLKNAKYLDVIERNSGATDKIIRW 388


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 392 NDDLIGCMFGEQGEY 348
           N   +G +FG QG Y
Sbjct: 275 NSSTVGTIFGYQGTY 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,224
Number of Sequences: 438
Number of extensions: 2978
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)