Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_H04
(122 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens ... 29 0.011
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 26 0.59
AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens ... 27 1.1
BC070062-1|AAH70062.1| 908|Homo sapiens RIN3 protein protein. 30 1.2
Z79996-1|CAI18758.1| 343|Homo sapiens apolipoprotein L, 6 protein. 29 2.7
CR456381-1|CAG30267.1| 343|Homo sapiens APOL6 protein. 29 2.7
BC047864-1|AAH47864.1| 343|Homo sapiens apolipoprotein L, 6 pro... 29 2.7
BC038950-1|AAH38950.2| 343|Homo sapiens APOL6 protein protein. 29 2.7
AY358210-1|AAQ88577.1| 343|Homo sapiens APOL-like protein. 29 2.7
AY014879-1|AAK07724.1| 343|Homo sapiens apolipoprotein L6 protein. 29 2.7
AK074645-1|BAC11109.1| 265|Homo sapiens protein ( Homo sapiens ... 29 2.7
AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens ... 28 4.7
X70697-1|CAA50029.1| 630|Homo sapiens serotonin transporter pro... 28 6.2
L05568-1|AAA35492.1| 630|Homo sapiens Na+/Cl- dependent seroton... 28 6.2
BC069484-1|AAH69484.1| 630|Homo sapiens solute carrier family 6... 28 6.2
AY902473-1|AAW80933.1| 630|Homo sapiens serotonin transporter p... 28 6.2
M59371-1|AAA53375.1| 976|Homo sapiens protein-tyrosine kinase p... 27 8.3
BC037166-1|AAH37166.1| 976|Homo sapiens EPH receptor A2 protein. 27 8.3
AL451042-1|CAH71943.1| 976|Homo sapiens EPH receptor A2 protein. 27 8.3
AK128338-1|BAC87390.1| 909|Homo sapiens protein ( Homo sapiens ... 27 8.3
AK128134-1|BAC87289.1| 377|Homo sapiens member 6 (SLC12A6). pr... 27 8.3
AB081753-1|BAC16513.1| 985|Homo sapiens RIN3 protein. 27 8.3
>AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens
cDNA FLJ12547 fis, clone NT2RM4000634. ).
Length = 307
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 62 VYVCVCFCVCGSCTLL 15
V++CVC CVCG CT +
Sbjct: 96 VHICVCACVCG-CTFV 110
Score = 28.3 bits (60), Expect = 4.7
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 65 WVYVCVCFCVC 33
WV++CVC C+C
Sbjct: 198 WVHICVCVCLC 208
Score = 28.3 bits (60), Expect = 4.7
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 65 WVYVCVCFCVC 33
WV++CVC C+C
Sbjct: 236 WVHICVCVCLC 246
Score = 27.9 bits (59), Expect(2) = 0.46
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 59 YVCVCFCVCGSCTLL 15
+VCVC CVCG CT +
Sbjct: 166 FVCVCACVCG-CTFV 179
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 59 YVCVCFCVCGSCTLL 15
+VCVC CVCG CT +
Sbjct: 178 FVCVCACVCG-CTFV 191
Score = 27.9 bits (59), Expect = 6.2
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 65 WVYVCVCFCVC 33
WV++CVC C C
Sbjct: 248 WVHICVCVCAC 258
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 65 WVYVCVCFCVCGSCTLL 15
WV++CVC +CG CT +
Sbjct: 26 WVHICVCVRLCG-CTFV 41
Score = 26.2 bits (55), Expect(3) = 0.011
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1
Query: 59 YVCVCFCVCG 30
+VCVC CVCG
Sbjct: 109 FVCVCACVCG 118
Score = 25.0 bits (52), Expect(3) = 0.011
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 65 WVYVCVCFCVC 33
WV++CVC VC
Sbjct: 69 WVHICVCASVC 79
Score = 23.4 bits (48), Expect(3) = 0.011
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 56 VCVCFCVCGS 27
VC C CVCG+
Sbjct: 116 VCGCLCVCGA 125
Score = 22.6 bits (46), Expect(2) = 0.46
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 104 VVACAVEGWWRVPWVYVCVCFCVC 33
V AC V G V ++CVC C+C
Sbjct: 112 VCAC-VCGCLCVCGAHLCVCVCLC 134
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane
helix receptor protein.
Length = 346
Score = 26.2 bits (55), Expect(2) = 0.59
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1
Query: 62 VYVCVCFCVC 33
V+VCVC CVC
Sbjct: 47 VFVCVCICVC 56
Score = 23.8 bits (49), Expect(2) = 0.59
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 65 WVYVCVCFCV 36
++YVCVC CV
Sbjct: 18 YLYVCVCICV 27
Score = 23.8 bits (49), Expect(2) = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 56 VCVCFCVCGSCTLLLSPF 3
VCVC C+C S + +S +
Sbjct: 155 VCVCVCLCVSVYVCVSSY 172
Score = 23.4 bits (48), Expect(2) = 3.7
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 62 VYVCVCFCV 36
VYVC+C CV
Sbjct: 119 VYVCICVCV 127
>AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ38312 fis, clone FCBBF3021506. ).
Length = 134
Score = 26.6 bits (56), Expect(2) = 1.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 62 VYVCVCFCVCGSCTLLLS 9
+ VCVC CVC S L+L+
Sbjct: 94 ICVCVCVCVCVSSHLVLT 111
Score = 22.6 bits (46), Expect(2) = 1.1
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -1
Query: 65 WVYVCVCFCV 36
+VYVC+C C+
Sbjct: 59 FVYVCICVCL 68
>BC070062-1|AAH70062.1| 908|Homo sapiens RIN3 protein protein.
Length = 908
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 62 PTAHATNPLRHTPQRCPPPP 121
PT+ AT+P RCPPPP
Sbjct: 264 PTSDATSPTSRWAPRCPPPP 283
>Z79996-1|CAI18758.1| 343|Homo sapiens apolipoprotein L, 6 protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 6/27 (22%)
Frame = -1
Query: 95 CAVEGWWRV------PWVYVCVCFCVC 33
C E +W+ W+++CVC CVC
Sbjct: 311 CETEAYWKELREHVWMWLWLCVCLCVC 337
>CR456381-1|CAG30267.1| 343|Homo sapiens APOL6 protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 6/27 (22%)
Frame = -1
Query: 95 CAVEGWWRV------PWVYVCVCFCVC 33
C E +W+ W+++CVC CVC
Sbjct: 311 CETEAYWKELREHVWMWLWLCVCLCVC 337
>BC047864-1|AAH47864.1| 343|Homo sapiens apolipoprotein L, 6
protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 6/27 (22%)
Frame = -1
Query: 95 CAVEGWWRV------PWVYVCVCFCVC 33
C E +W+ W+++CVC CVC
Sbjct: 311 CETEAYWKELREHVWMWLWLCVCLCVC 337
>BC038950-1|AAH38950.2| 343|Homo sapiens APOL6 protein protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 6/27 (22%)
Frame = -1
Query: 95 CAVEGWWRV------PWVYVCVCFCVC 33
C E +W+ W+++CVC CVC
Sbjct: 311 CETEAYWKELREHVWMWLWLCVCLCVC 337
>AY358210-1|AAQ88577.1| 343|Homo sapiens APOL-like protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 6/27 (22%)
Frame = -1
Query: 95 CAVEGWWRV------PWVYVCVCFCVC 33
C E +W+ W+++CVC CVC
Sbjct: 311 CETEAYWKELREHVWMWLWLCVCLCVC 337
>AY014879-1|AAK07724.1| 343|Homo sapiens apolipoprotein L6 protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 6/27 (22%)
Frame = -1
Query: 95 CAVEGWWRV------PWVYVCVCFCVC 33
C E +W+ W+++CVC CVC
Sbjct: 311 CETEAYWKELREHVWMWLWLCVCLCVC 337
>AK074645-1|BAC11109.1| 265|Homo sapiens protein ( Homo sapiens
cDNA FLJ90164 fis, clone MAMMA1000102, weakly similar to
APOLIPOPROTEIN L PRECURSOR. ).
Length = 265
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 6/27 (22%)
Frame = -1
Query: 95 CAVEGWWRV------PWVYVCVCFCVC 33
C E +W+ W+++CVC CVC
Sbjct: 233 CETEAYWKELREHVWMWLWLCVCLCVC 259
>AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ45585 fis, clone BRTHA3013882. ).
Length = 201
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 65 WVYVCVCFCVCGSCTLLLSPF 3
WV VC+C CVC L L F
Sbjct: 146 WVCVCLCVCVCLCVCLCLCVF 166
>X70697-1|CAA50029.1| 630|Homo sapiens serotonin transporter
protein.
Length = 630
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 83 GW-WRVPWVYVCVCFCVCGSCTLLLSP 6
GW WR+ WV + F + C+ L+SP
Sbjct: 534 GWFWRICWVAISPLFLLFIICSFLMSP 560
>L05568-1|AAA35492.1| 630|Homo sapiens Na+/Cl- dependent serotonin
transporter protein.
Length = 630
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 83 GW-WRVPWVYVCVCFCVCGSCTLLLSP 6
GW WR+ WV + F + C+ L+SP
Sbjct: 534 GWFWRICWVAISPLFLLFIICSFLMSP 560
>BC069484-1|AAH69484.1| 630|Homo sapiens solute carrier family 6
member 4 protein.
Length = 630
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 83 GW-WRVPWVYVCVCFCVCGSCTLLLSP 6
GW WR+ WV + F + C+ L+SP
Sbjct: 534 GWFWRICWVAISPLFLLFIICSFLMSP 560
>AY902473-1|AAW80933.1| 630|Homo sapiens serotonin transporter
protein.
Length = 630
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 83 GW-WRVPWVYVCVCFCVCGSCTLLLSP 6
GW WR+ WV + F + C+ L+SP
Sbjct: 534 GWFWRICWVAISPLFLLFIICSFLMSP 560
>M59371-1|AAA53375.1| 976|Homo sapiens protein-tyrosine kinase
protein.
Length = 976
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 122 PGGGGSVVACAVEGWWRVPWVYVCVC 45
PGG + CAV+G W VP + C+C
Sbjct: 238 PGGEEPRMHCAVDGEWLVP-IGQCLC 262
>BC037166-1|AAH37166.1| 976|Homo sapiens EPH receptor A2 protein.
Length = 976
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 122 PGGGGSVVACAVEGWWRVPWVYVCVC 45
PGG + CAV+G W VP + C+C
Sbjct: 238 PGGEEPRMHCAVDGEWLVP-IGQCLC 262
>AL451042-1|CAH71943.1| 976|Homo sapiens EPH receptor A2 protein.
Length = 976
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 122 PGGGGSVVACAVEGWWRVPWVYVCVC 45
PGG + CAV+G W VP + C+C
Sbjct: 238 PGGEEPRMHCAVDGEWLVP-IGQCLC 262
>AK128338-1|BAC87390.1| 909|Homo sapiens protein ( Homo sapiens
cDNA FLJ46480 fis, clone THYMU3025683, weakly similar
to Ras interaction/interference protein 1. ).
Length = 909
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 62 PTAHATNPL-RHTPQRCPPPP 121
PT+ AT+P R P+R PPPP
Sbjct: 189 PTSDATSPTSRWAPRRPPPPP 209
>AK128134-1|BAC87289.1| 377|Homo sapiens member 6 (SLC12A6).
protein.
Length = 377
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 37 TQKHTQTYTHGTRHQPSTAHATTLP 111
TQ HT+ +H H P T H+ T P
Sbjct: 313 TQLHTRPCSHTCAHTPHTIHSRTHP 337
>AB081753-1|BAC16513.1| 985|Homo sapiens RIN3 protein.
Length = 985
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 62 PTAHATNPL-RHTPQRCPPPP 121
PT+ AT+P R P+R PPPP
Sbjct: 264 PTSDATSPTSRWAPRRPPPPP 284
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.311 0.125 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,185,278
Number of Sequences: 237096
Number of extensions: 402589
Number of successful extensions: 2089
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2035
length of database: 76,859,062
effective HSP length: 21
effective length of database: 71,880,046
effective search space used: 1365720874
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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