Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_H04
         (122 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   0.19 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    24   0.19 
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   0.78 
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   0.78 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   3.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   3.2  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    19   5.5  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    19   7.3  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    19   7.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                19   7.3  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    18   9.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    18   9.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    18   9.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              18   9.6  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 0.19
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 2/22 (9%)
 Frame = +2

Query: 62   PTAHATNPLRHTP--QRCPPPP 121
            P  H    L H    +RCPPPP
Sbjct: 1684 PRRHMYEELNHCAPNRRCPPPP 1705


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 0.19
 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 4/25 (16%)
 Frame = +2

Query: 59  TPTAHATNP----LRHTPQRCPPPP 121
           TP AH++ P    + HTP   P PP
Sbjct: 446 TPLAHSSYPAAIQIGHTPHHHPHPP 470



 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +1

Query: 46  HTQTYTHGTRHQPSTAH 96
           H  T  HG  H  +T H
Sbjct: 415 HHHTMGHGHSHIHATPH 431


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 0.78
 Identities = 5/15 (33%), Positives = 7/15 (46%)
 Frame = -1

Query: 80  WWRVPWVYVCVCFCV 36
           WW++ W       CV
Sbjct: 490 WWKICWTITTPAICV 504


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 0.78
 Identities = 5/15 (33%), Positives = 7/15 (46%)
 Frame = -1

Query: 80  WWRVPWVYVCVCFCV 36
           WW++ W       CV
Sbjct: 543 WWKICWTITTPAICV 557


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 44   FCVCGSCTL 18
            F VCG CT+
Sbjct: 1069 FYVCGDCTM 1077


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 37  TQKHTQTYTHGTRHQPSTAHATTLPP 114
           T   T T T  T +    A ATT PP
Sbjct: 666 TTTTTTTTTTTTPNTTQNASATTPPP 691


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 116 GGGSVVACAV 87
           GG S +ACA+
Sbjct: 191 GGSSALACAI 200


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/39 (23%), Positives = 14/39 (35%)
 Frame = +1

Query: 1   EKGDRRRVQLPQTQKHTQTYTHGTRHQPSTAHATTLPPP 117
           E G+ R V +PQ +            +P       +P P
Sbjct: 97  EPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQP 135



 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/39 (23%), Positives = 14/39 (35%)
 Frame = +1

Query: 1   EKGDRRRVQLPQTQKHTQTYTHGTRHQPSTAHATTLPPP 117
           E G+ R V +PQ +            +P       +P P
Sbjct: 123 EPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQP 161


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 95  TPQRCPPPP 121
           T Q CP PP
Sbjct: 614 TNQSCPSPP 622


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +2

Query: 71  HATNPLRHTPQRCPP 115
           H T  L+H   R PP
Sbjct: 356 HQTQSLQHLHYRQPP 370


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 92  AVEGWWRVPW 63
           A+EG+ RV W
Sbjct: 365 ALEGYCRVAW 374


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 83   GWWRVPWVYVCVCFCVCGSCTLLLSP 6
            G+WRV        + VC    +++SP
Sbjct: 1226 GFWRVEMPRSNADYEVCIGSQIMVSP 1251


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 92  AVEGWWRVPW 63
           A+EG+ RV W
Sbjct: 365 ALEGYCRVAW 374


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = -3

Query: 66  VGVCLCMFLC 37
           + VC+CM  C
Sbjct: 101 IAVCVCMRKC 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.311    0.125    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,045
Number of Sequences: 438
Number of extensions: 576
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 21
effective length of database: 137,145
effective search space used:  2605755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.7 bits)