Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_H02
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.2  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   9.2  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.2  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.2  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 315 QL*NY*RFDDYSACHYCHPED 377
           QL N  +F  YS+    HPED
Sbjct: 265 QLPNMTKFGAYSSDKIYHPED 285


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 140 LLLTWWVEPRK*SSPHQVLML 202
           +++T++ +  + S PHQ+L L
Sbjct: 114 IMITFYRDEPRFSQPHQILTL 134


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 140 LLLTWWVEPRK*SSPHQVLML 202
           +++T++ +  + S PHQ+L L
Sbjct: 274 IMITFYRDEPRFSQPHQILTL 294


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 140 LLLTWWVEPRK*SSPHQVLML 202
           +++T++ +  + S PHQ+L L
Sbjct: 274 IMITFYRDEPRFSQPHQILTL 294


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 589 IKQKVKEAAEGPLKGIWDTLKT 654
           I+Q    +A GP    W T++T
Sbjct: 291 IQQATPYSAPGPTYSTWSTVQT 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,759
Number of Sequences: 336
Number of extensions: 3371
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)